MGE detailed information
MGE type: Conjugative plasmid MGE length: 74817 bp
Accession: NZ_CP053725 Location: 1..74817 Organism: Escherichia coli strain CP66-6_Sichuan Replicon: plasmid pCP66-6-IncFII
Accession: NZ_CP053725 Location: 1..74817 Organism: Escherichia coli strain CP66-6_Sichuan Replicon: plasmid pCP66-6-IncFII
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HP433_RS23670 () | 1..858 | + | 858 | WP_000130647.1 | incFII family plasmid replication initiator RepA | - |
| HP433_RS23675 () | 1952..2344 | - | 393 | Protein_2 | Methyl-accepting chemotaxis protein McpU | VF |
| HP433_RS23680 () | 2377..5409 | - | 3033 | WP_039022048.1 | Tn3 family transposase ISPsy42 | Transposase |
| HP433_RS23685 () | 5413..5973 | - | 561 | WP_039022047.1 | Tn3 family transposase TnpR_TnAs2 | Transposase |
| HP433_RS23690 () | 6104..6454 | - | 351 | WP_000454193.1 | DUF3330 domain-containing protein | - |
| HP433_RS23695 () | 6657..7670 | - | 1014 | WP_000845048.1 | IS91 family transposase ISAzo26 | Transposase |
| HP433_RS23700 () | 7815..8312 | + | 498 | WP_001083725.1 | Dihydrofolate reductase | ARG |
| HP433_RS23705 () | 8490..9254 | + | 765 | WP_001389365.1 | IS6 family transposase IS6100 | Transposase |
| HP433_RS23710 () | 9747..10331 | - | 585 | WP_001137892.1 | TetR family transcriptional regulator | - |
| HP433_RS23715 () | 10331..11569 | - | 1239 | WP_000004159.1 | MFS transporter | - |
| HP433_RS23720 () | 11566..12471 | - | 906 | WP_000219391.1 | hypothetical protein | ARG |
| HP433_RS23725 () | 12593..13297 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| HP433_RS23730 () | 13683..14099 | + | 417 | WP_034169466.1 | Glutathione transferase FosA | ARG |
| HP433_RS23735 () | 14104..14622 | - | 519 | WP_034169467.1 | hypothetical protein | - |
| HP433_RS23740 () | 14622..15293 | - | 672 | Protein_15 | winged helix-turn-helix domain-containing protein | - |
| HP433_RS23745 () | 15347..16051 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| HP433_RS23750 () | 16160..16354 | + | 195 | Protein_17 | replication initiation protein | - |
| HP433_RS23755 () | 16362..16811 | + | 450 | WP_023281052.1 | hypothetical protein | - |
| HP433_RS23760 () | 16790..16939 | + | 150 | WP_152930637.1 | hypothetical protein | - |
| HP433_RS23765 () | 17459..17998 | + | 540 | WP_039021305.1 | hypothetical protein | - |
| HP433_RS23770 () | 18009..18458 | + | 450 | WP_039021304.1 | hypothetical protein | - |
| HP433_RS23775 () | 18442..18984 | + | 543 | WP_039021303.1 | hypothetical protein | - |
| HP433_RS23780 () | 19056..19463 | + | 408 | WP_001567331.1 | hypothetical protein | - |
| HP433_RS23785 () | 19506..19709 | + | 204 | WP_001567330.1 | hypothetical protein | - |
| HP433_RS23790 () | 19958..22006 | + | 2049 | WP_023281053.1 | site-specific DNA-methyltransferase | - |
| HP433_RS23795 () | 22011..24647 | + | 2637 | WP_023281054.1 | DEAD/DEAH box helicase family protein | - |
| HP433_RS23800 () | 24690..24782 | - | 93 | Protein_27 | tRNA modification GTPase | - |
| HP433_RS23805 () | 24931..25791 | - | 861 | WP_050190632.1 | Beta-lactamase TEM | ARG |
| HP433_RS23810 () | 25926..26054 | - | 129 | Protein_29 | IS6 family transposase | - |
| HP433_RS23815 () | 26088..26942 | - | 855 | Protein_30 | Tn3 family transposase TnpA_TnAs3 | Transposase |
| HP433_RS23820 () | 27211..28836 | + | 1626 | WP_089613755.1 | Phosphoethanolamine transferase EptA | VF |
| HP433_RS23825 () | 28954..29334 | + | 381 | WP_039026395.1 | diacylglycerol kinase | - |
| HP433_RS23830 () | 29472..30176 | - | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
| HP433_RS23835 () | 30314..30931 | - | 618 | WP_172615465.1 | IS6 family transposase IS15DI | Transposase |
| HP433_RS23840 () | 31069..31686 | - | 618 | WP_172615465.1 | IS6 family transposase IS15DI | Transposase |
| HP433_RS23845 () | 31752..33266 | + | 1515 | Protein_36 | Tn3 family transposase TnpA_TnAs1 | Transposase |
| HP433_RS23850 () | 33335..34219 | + | 885 | WP_001345827.1 | hypothetical protein | - |
| HP433_RS23855 () | 34215..34384 | + | 170 | Protein_38 | resolvase | - |
| HP433_RS23860 () | 34391..34558 | - | 168 | WP_001430249.1 | hypothetical protein | - |
| HP433_RS23865 () | 34730..37405 | - | 2676 | WP_015059139.1 | hypothetical protein | - |
| HP433_RS23870 () | 37708..38709 | + | 1002 | WP_000138753.1 | DUF4238 domain-containing protein | - |
| HP433_RS23875 () | 38934..39396 | - | 463 | Protein_42 | hypothetical protein | - |
| HP433_RS23880 () | 39505..39855 | - | 351 | WP_001430247.1 | plasmid partitioning/stability family protein | - |
| HP433_RS23885 () | 39858..40820 | - | 963 | WP_000959875.1 | plasmid segregation protein ParM | - |
| HP433_RS23890 () | 40952..41260 | + | 309 | WP_039021875.1 | hypothetical protein | - |
| HP433_RS23895 () | 41337..42020 | + | 684 | WP_000085889.1 | DNA methylase | - |
| HP433_RS23900 () | 42021..42242 | + | 222 | WP_001104902.1 | hypothetical protein | - |
| HP433_RS23905 () | 42255..42688 | + | 434 | Protein_48 | DUF1380 domain-containing protein | - |
| HP433_RS23910 () | 42733..43503 | + | 771 | WP_001006207.1 | hypothetical protein | - |
| HP433_RS23915 () | 43504..43848 | + | 345 | Protein_50 | DUF1472 domain-containing protein | - |
| HP433_RS23920 () | 43986..44288 | + | 303 | WP_001671341.1 | antirestriction protein | - |
| HP433_RS23925 () | 44335..44757 | + | 423 | WP_000271684.1 | DUF1380 family protein | - |
| HP433_RS23930 () | 44754..44945 | + | 192 | WP_039021874.1 | hypothetical protein | - |
| HP433_RS23935 () | 45980..46210 | + | 231 | WP_000218642.1 | hypothetical protein | - |
| HP433_RS23940 () | 46262..47623 | + | 1362 | WP_000170715.1 | DUF3560 domain-containing protein | - |
| HP433_RS23945 () | 47671..48234 | + | 564 | WP_001315564.1 | class I SAM-dependent methyltransferase | - |
| HP433_RS23950 () | 48260..48481 | + | 222 | WP_042111886.1 | hypothetical protein | - |
| HP433_RS23955 () | 48702..48890 | + | 189 | WP_032146593.1 | hypothetical protein | - |
| HP433_RS23960 () | 48892..49098 | + | 207 | WP_000275858.1 | hypothetical protein | - |
| HP433_RS23965 () | 49124..49663 | + | 540 | WP_001825195.1 | single-stranded DNA-binding protein | - |
| HP433_RS23970 () | 49726..49959 | + | 234 | WP_000005990.1 | DUF905 family protein | - |
| HP433_RS23975 () | 50025..51983 | + | 1959 | WP_001825193.1 | ParB/RepB/Spo0J family partition protein | - |
| HP433_RS23980 () | 52038..52472 | + | 435 | WP_000845953.1 | conjugation system SOS inhibitor PsiB | - |
| HP433_RS23985 () | 52469..53188 | + | 720 | WP_013362833.1 | plasmid SOS inhibition protein A | - |
| HP433_RS23990 () | 53200..53388 | - | 189 | WP_001299721.1 | hypothetical protein | - |
| - () | 53200..53424 | + | 225 | NuclAT_0 | - | - |
| - () | 53200..53424 | + | 225 | NuclAT_0 | - | - |
| - () | 53200..53424 | + | 225 | NuclAT_0 | - | - |
| - () | 53200..53424 | + | 225 | NuclAT_0 | - | - |
| - () | 53357..53422 | + | 66 | - | - | Antitoxin Detail |
| HP433_RS23995 () | 53468..53626 | + | 159 | WP_001312861.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| HP433_RS24000 () | 54127..54315 | + | 189 | WP_042111937.1 | hypothetical protein | - |
| HP433_RS24005 () | 54548..54835 | + | 288 | WP_000107544.1 | hypothetical protein | - |
| HP433_RS24010 () | 54956..55777 | + | 822 | WP_172615468.1 | DUF945 domain-containing protein | - |
| HP433_RS24015 () | 56074..56721 | - | 648 | WP_031943493.1 | hypothetical protein | VF |
| HP433_RS24020 () | 56998..57381 | + | 384 | WP_000124981.1 | relaxosome protein TraM | - |
| HP433_RS24025 () | 57572..58258 | + | 687 | WP_000332484.1 | PAS domain-containing protein | - |
| HP433_RS24030 () | 58352..58579 | + | 228 | WP_001254386.1 | conjugal transfer relaxosome protein TraY | - |
| HP433_RS24035 () | 58613..58975 | + | 363 | WP_000340279.1 | type IV conjugative transfer system pilin TraA | - |
| HP433_RS24040 () | 58980..59291 | + | 312 | WP_000012106.1 | type IV conjugative transfer system protein TraL | - |
| HP433_RS24045 () | 59313..59879 | + | 567 | WP_000399792.1 | type IV conjugative transfer system protein TraE | - |
| HP433_RS24050 () | 59890..60594 | + | 705 | WP_072095570.1 | type-F conjugative transfer system secretin TraK | - |
| HP433_RS24055 () | 60594..61541 | + | 948 | WP_172615467.1 | F-type conjugal transfer pilus assembly protein TraB | - |
| HP433_RS24060 () | 61490..63607 | + | 2118 | Protein_79 | type IV conjugative transfer system coupling protein TraD | - |
| HP433_RS24065 () | 63607..68877 | + | 5271 | WP_039021708.1 | Multifunctional conjugation protein TraI | Relaxase |
| HP433_RS24070 () | 68897..69643 | + | 747 | WP_015059122.1 | conjugal transfer pilus acetylase TraX | - |
| HP433_RS24075 () | 69698..70258 | + | 561 | WP_000139341.1 | fertility inhibition protein FinO | - |
| HP433_RS24080 () | 70888..71565 | + | 678 | WP_000392235.1 | hypothetical protein | - |
| HP433_RS24085 () | 72219..72431 | + | 213 | Protein_84 | ANR family transcriptional regulator | - |
| HP433_RS24090 () | 72675..73136 | + | 462 | WP_015059120.1 | thermonuclease family protein | - |
| HP433_RS24095 () | 73182..73391 | + | 210 | WP_001333231.1 | hemolysin expression modulator Hha | - |
| HP433_RS24100 () | 73429..74019 | + | 591 | WP_000766816.1 | DUF2726 domain-containing protein | - |
| HP433_RS24105 () | 74259..74513 | + | 255 | WP_000083830.1 | replication regulatory protein RepA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|