MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 59462 bp
Accession: NZ_CP053676 Location: 959620..1019081 Organism: MAG: Ferrovum myxofaciens isolate S2.4 Replicon: chromosome
Accession: NZ_CP053676 Location: 959620..1019081 Organism: MAG: Ferrovum myxofaciens isolate S2.4 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HO274_RS04610 (HO274_04585) | 954744..956012 | - | 1269 | WP_273121790.1 | histidine--tRNA ligase | - |
| HO274_RS04615 (HO274_04590) | 956009..957250 | - | 1242 | WP_273121791.1 | flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase | - |
| HO274_RS04620 (HO274_04595) | 957247..957909 | - | 663 | WP_273121792.1 | helix-turn-helix domain-containing protein | - |
| HO274_RS04625 (HO274_04600) | 957906..958988 | - | 1083 | WP_273121793.1 | 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN | - |
| HO274_RS04630 (HO274_04605) | 959000..959425 | - | 426 | WP_031596889.1 | nucleoside-diphosphate kinase | - |
| HO274_RS04635 (HO274_04610) | 959620..960879 | + | 1260 | WP_273121796.1 | hypothetical protein | - |
| HO274_RS04640 (HO274_04615) | 961075..962067 | - | 993 | WP_273121798.1 | tRNA lysidine(34) synthetase TilS | - |
| HO274_RS04645 (HO274_04620) | 962042..963004 | - | 963 | WP_031596887.1 | acetyl-CoA carboxylase carboxyltransferase subunit alpha | - |
| HO274_RS04650 (HO274_04625) | 963014..963589 | - | 576 | WP_031596886.1 | DUF4337 domain-containing protein | - |
| HO274_RS04655 (HO274_04630) | 963593..964672 | - | 1080 | WP_031596885.1 | 3-deoxy-7-phosphoheptulonate synthase | - |
| HO274_RS04660 (HO274_04635) | 964721..966160 | - | 1440 | WP_273121802.1 | metalloprotease TldD | - |
| HO274_RS04665 (HO274_04640) | 966214..967107 | - | 894 | WP_197456359.1 | carbon-nitrogen hydrolase family protein | - |
| HO274_RS04670 (HO274_04645) | 967137..971381 | - | 4245 | WP_273121803.1 | DUF3971 domain-containing protein | - |
| HO274_RS04675 (HO274_04650) | 971458..972384 | + | 927 | WP_273121804.1 | branched-chain amino acid transaminase | - |
| HO274_RS04680 (HO274_04655) | 972388..972582 | + | 195 | WP_031596878.1 | zinc-finger domain-containing protein | - |
| HO274_RS04685 (HO274_04660) | 972579..973583 | + | 1005 | WP_273121806.1 | lipopolysaccharide heptosyltransferase II | - |
| HO274_RS04690 (HO274_04665) | 973580..973840 | - | 261 | WP_031596876.1 | hypothetical protein | - |
| HO274_RS04695 (HO274_04670) | 973837..974847 | - | 1011 | WP_031596875.1 | type IV secretion system protein | - |
| HO274_RS04700 (HO274_04675) | 974854..975633 | - | 780 | WP_031596874.1 | hypothetical protein | - |
| HO274_RS04705 (HO274_04680) | 975630..978083 | - | 2454 | WP_273121809.1 | hypothetical protein | - |
| HO274_RS04710 (HO274_04685) | 978077..978394 | - | 318 | WP_031596872.1 | VirB3 family type IV secretion system protein | - |
| HO274_RS04715 (HO274_04690) | 978394..978744 | - | 351 | WP_273121811.1 | TrbC/VirB2 family protein | - |
| HO274_RS04720 (HO274_04695) | 978719..979699 | - | 981 | WP_273121813.1 | ATPase, T2SS/T4P/T4SS family | - |
| HO274_RS04725 (HO274_04700) | 979776..980849 | - | 1074 | WP_273121815.1 | alanine racemase | - |
| HO274_RS04730 (HO274_04705) | 980843..981955 | + | 1113 | WP_273121817.1 | alpha/beta fold hydrolase | - |
| HO274_RS04735 (HO274_04710) | 981982..983355 | + | 1374 | WP_062187734.1 | phosphomannomutase/phosphoglucomutase | - |
| HO274_RS04745 (HO274_04720) | 983550..984173 | + | 624 | WP_273121820.1 | acyloxyacyl hydrolase | - |
| HO274_RS04750 (HO274_04725) | 984175..985767 | + | 1593 | WP_273121822.1 | DNA polymerase III subunit gamma/tau | - |
| HO274_RS04755 (HO274_04730) | 985764..986087 | + | 324 | WP_031596861.1 | YbaB/EbfC family nucleoid-associated protein | - |
| HO274_RS04760 (HO274_04735) | 986094..986696 | + | 603 | WP_031596859.1 | recombination mediator RecR | - |
| HO274_RS04765 (HO274_04740) | 986713..987993 | + | 1281 | WP_031596856.1 | serine--tRNA ligase | - |
| HO274_RS04770 (HO274_04745) | 987960..989474 | - | 1515 | WP_273121826.1 | membrane-bound lytic murein transglycosylase MltF | - |
| HO274_RS04775 (HO274_04750) | 989504..990205 | + | 702 | WP_273121828.1 | 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase | - |
| HO274_RS04780 (HO274_04755) | 990183..990656 | + | 474 | WP_273121830.1 | 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase | - |
| HO274_RS04785 (HO274_04760) | 990659..991252 | - | 594 | WP_035417296.1 | GTP cyclohydrolase II | - |
| HO274_RS04790 (HO274_04765) | 991322..991969 | - | 648 | WP_031596848.1 | YjbE family putative metal transport protein | - |
| HO274_RS04795 (HO274_04770) | 991977..992984 | - | 1008 | WP_227509458.1 | NAD(P)H-quinone oxidoreductase | - |
| HO274_RS04800 (HO274_04775) | 993073..993657 | + | 585 | WP_273121832.1 | chorismate lyase | - |
| HO274_RS04805 (HO274_04780) | 993736..994377 | + | 642 | WP_273121834.1 | response regulator transcription factor | - |
| HO274_RS04810 (HO274_04785) | 994385..996193 | - | 1809 | WP_273121835.1 | DUF748 domain-containing protein | - |
| HO274_RS04815 (HO274_04790) | 996238..996639 | - | 402 | WP_273121837.1 | type II toxin-antitoxin system VapC family toxin | - |
| HO274_RS04820 (HO274_04795) | 996636..996866 | - | 231 | WP_273121839.1 | hypothetical protein | - |
| HO274_RS04825 (HO274_04800) | 996929..997405 | - | 477 | WP_273121841.1 | OsmC family protein | - |
| HO274_RS04830 (HO274_04805) | 997402..997836 | - | 435 | WP_273121843.1 | hypothetical protein | - |
| HO274_RS04835 (HO274_04810) | 998486..998812 | - | 327 | WP_031596839.1 | type II toxin-antitoxin system PemK/MazF family toxin | Toxin Detail |
| HO274_RS04840 (HO274_04815) | 998809..999030 | - | 222 | WP_273121846.1 | antitoxin MazE family protein | Antitoxin Detail |
| HO274_RS04845 (HO274_04820) | 999199..999621 | - | 423 | WP_031599221.1 | type II toxin-antitoxin system VapC family toxin | - |
| HO274_RS04850 (HO274_04825) | 999618..999932 | - | 315 | WP_031599223.1 | type II toxin-antitoxin system prevent-host-death family antitoxin | - |
| HO274_RS04855 (HO274_04830) | 1000236..1001786 | - | 1551 | WP_273121848.1 | transposase | - |
| HO274_RS04860 (HO274_04835) | 1002105..1004027 | + | 1923 | WP_273121850.1 | nucleoside-diphosphate sugar epimerase/dehydratase | - |
| HO274_RS04865 (HO274_04840) | 1004093..1005541 | + | 1449 | WP_051862726.1 | flippase | - |
| HO274_RS04870 (HO274_04845) | 1005856..1006896 | + | 1041 | WP_273121852.1 | class I SAM-dependent methyltransferase | - |
| HO274_RS04875 (HO274_04850) | 1006905..1007648 | + | 744 | WP_273121854.1 | glycosyltransferase | - |
| HO274_RS04880 (HO274_04855) | 1007668..1008636 | - | 969 | WP_273121856.1 | glycosyltransferase family 2 protein | - |
| HO274_RS04885 (HO274_04860) | 1008826..1009302 | - | 477 | WP_273121858.1 | hypothetical protein | - |
| HO274_RS04890 (HO274_04865) | 1009374..1009874 | - | 501 | WP_273122277.1 | IS21 family transposase | - |
| HO274_RS04895 (HO274_04870) | 1010188..1010484 | - | 297 | WP_273121860.1 | helix-turn-helix domain-containing protein | - |
| HO274_RS04900 (HO274_04875) | 1010487..1010825 | - | 339 | WP_273121861.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| HO274_RS04905 (HO274_04880) | 1011387..1011749 | + | 363 | WP_273121862.1 | hypothetical protein | - |
| HO274_RS04910 (HO274_04885) | 1011852..1012862 | + | 1011 | WP_273121863.1 | hypothetical protein | - |
| HO274_RS04915 | 1012859..1013032 | + | 174 | WP_273121865.1 | hypothetical protein | - |
| HO274_RS04920 (HO274_04890) | 1013066..1013695 | + | 630 | WP_273121866.1 | ATP-binding protein | - |
| HO274_RS04925 | 1013779..1014201 | + | 423 | WP_273121867.1 | hypothetical protein | - |
| HO274_RS04930 (HO274_04900) | 1014212..1014535 | + | 324 | WP_273121869.1 | helix-turn-helix transcriptional regulator | - |
| HO274_RS04935 (HO274_04905) | 1014611..1015642 | + | 1032 | WP_273121871.1 | ATP-binding protein | - |
| HO274_RS04940 (HO274_04910) | 1015706..1015969 | - | 264 | WP_031598138.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | - |
| HO274_RS04945 (HO274_04915) | 1016050..1016271 | - | 222 | WP_273121873.1 | hypothetical protein | - |
| HO274_RS04950 (HO274_04920) | 1016462..1016749 | - | 288 | WP_273120760.1 | hypothetical protein | - |
| HO274_RS04955 (HO274_04925) | 1016767..1017618 | - | 852 | WP_273121874.1 | ATP-binding protein | - |
| HO274_RS04960 (HO274_04930) | 1017615..1019081 | - | 1467 | WP_273121876.1 | DDE-type integrase/transposase/recombinase | - |
| HO274_RS04965 (HO274_04935) | 1019435..1020310 | + | 876 | WP_273121877.1 | hypothetical protein | - |
| HO274_RS04970 (HO274_04940) | 1020363..1021526 | - | 1164 | WP_062188633.1 | Fic family protein | - |
| HO274_RS04975 (HO274_04950) | 1022015..1023541 | - | 1527 | WP_273121878.1 | transposase | - |
| HO274_RS04980 (HO274_04955) | 1023538..1023630 | - | 93 | Protein_973 | transposase | - |
| HO274_RS04985 (HO274_04960) | 1023701..1023877 | - | 177 | WP_273121879.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|