MGE detailed information
MGE type: Prophage MGE length: 24543 bp
Accession: NZ_CP053649 Location: 2430430..2454972 Organism: Xanthomonas axonopodis pv. vasculorum strain NCPPB 796 Replicon: chromosome
Accession: NZ_CP053649 Location: 2430430..2454972 Organism: Xanthomonas axonopodis pv. vasculorum strain NCPPB 796 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| XAV_RS10420 () | 2426113..2426616 | - | 504 | WP_042822459.1 | type VI secretion system tube protein Hcp | - |
| XAV_RS10425 () | 2426716..2428233 | - | 1518 | WP_042822460.1 | type VI secretion system contractile sheath large subunit | - |
| XAV_RS10430 () | 2428226..2428753 | - | 528 | WP_134812475.1 | type VI secretion system contractile sheath small subunit | - |
| XAV_RS10435 () | 2429141..2430109 | + | 969 | WP_171890874.1 | IS5 family transposase | - |
| XAV_RS10445 () | 2431659..2432138 | - | 480 | Protein_2048 | integrase arm-type DNA-binding domain-containing protein | - |
| XAV_RS10460 () | 2432945..2434027 | + | 1083 | Protein_2049 | DUF2813 domain-containing protein | - |
| XAV_RS10465 () | 2434341..2435540 | + | 1200 | WP_134984155.1 | hypothetical protein | - |
| XAV_RS10470 () | 2435635..2436603 | - | 969 | WP_171890731.1 | IS5 family transposase ISXo1 | Transposase |
| XAV_RS10475 () | 2436802..2437799 | - | 998 | Protein_2052 | IS3 family transposase IS1404 | Transposase |
| XAV_RS10480 () | 2437865..2439009 | + | 1145 | WP_171890877.1 | IS3 family transposase ISXac3 | Transposase |
| XAV_RS10485 () | 2439033..2439695 | + | 663 | Protein_2054 | IS5 family transposase ISXo1 | Transposase |
| XAV_RS10490 () | 2439838..2441343 | + | 1506 | WP_042824524.1 | conjugal transfer protein TraG N-terminal domain-containing protein | - |
| XAV_RS10495 () | 2441348..2441719 | - | 372 | WP_134812339.1 | DUF3742 family protein | - |
| XAV_RS10500 () | 2441749..2442162 | - | 414 | WP_042821126.1 | PIN domain-containing protein | Toxin Detail |
| XAV_RS10505 () | 2442149..2442382 | - | 234 | WP_042821127.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Antitoxin Detail |
| XAV_RS10510 () | 2443089..2443090 | - | 2 | WP_171890878.1 | IS5 family transposase | - |
| XAV_RS10515 () | 2443544..2447350 | - | 3807 | WP_171890880.1 | avirulence protein | - |
| XAV_RS10520 () | 2447620..2447988 | - | 369 | WP_171890881.1 | IS5 family transposase ISPsy19 | Transposase |
| XAV_RS10525 () | 2448581..2449081 | + | 501 | WP_134812485.1 | DNA repair protein RadC | - |
| XAV_RS10530 () | 2449205..2449642 | + | 438 | WP_134812484.1 | TIGR03757 family integrating conjugative element protein | - |
| XAV_RS10535 () | 2449639..2450571 | + | 933 | WP_042822610.1 | TIGR03756 family integrating conjugative element protein | - |
| XAV_RS10540 () | 2450582..2451982 | + | 1401 | WP_042822609.1 | integrating conjugative element protein | - |
| XAV_RS10545 () | 2451979..2452941 | + | 963 | WP_042822607.1 | phosphoadenosine phosphosulfate reductase family protein | - |
| XAV_RS10550 () | 2452920..2453287 | + | 368 | Protein_2067 | hypothetical protein | - |
| XAV_RS10555 () | 2453635..2454972 | - | 1338 | Protein_2068 | Prophage integrase IntS ; Integrase | Integrase |
| XAV_RS10565 () | 2455305..2455937 | - | 633 | WP_042822604.1 | CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase | - |
| XAV_RS10570 () | 2455934..2457793 | - | 1860 | WP_042822603.1 | excinuclease ABC subunit UvrC | - |
| XAV_RS10575 () | 2457790..2459208 | - | 1419 | WP_042822601.1 | nhl repeat protein | - |
| XAV_RS10580 () | 2459232..2459696 | - | 465 | WP_042822600.1 | low molecular weight phosphotyrosine protein phosphatase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|