MGE detailed information
MGE type: Prophage MGE length: 23443 bp
Accession: NZ_CP053627 Location: 1312178..1335620 Organism: Xylella taiwanensis strain PLS229 Replicon: chromosome
Accession: NZ_CP053627 Location: 1312178..1335620 Organism: Xylella taiwanensis strain PLS229 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PLS229_RS05540 () | 1307233..1307562 | + | 330 | WP_152536648.1 | hypothetical protein | - |
| PLS229_RS05545 () | 1308268..1309221 | + | 954 | WP_038272140.1 | bifunctional biotin--[acetyl-CoA-carboxylase] synthetase/biotin operon repressor | - |
| PLS229_RS05550 () | 1309218..1309943 | + | 726 | WP_038272143.1 | type III pantothenate kinase | - |
| PLS229_RS05555 () | 1309954..1310580 | + | 627 | WP_038272144.1 | SPOR domain-containing protein | - |
| PLS229_RS05565 () | 1311845..1312144 | + | 300 | WP_038272145.1 | hypothetical protein | - |
| PLS229_RS05570 () | 1312271..1312513 | + | 243 | WP_160165207.1 | phage portal protein | - |
| PLS229_RS05575 () | 1312584..1313054 | + | 471 | WP_114867113.1 | phage portal protein | - |
| PLS229_RS05580 () | 1313281..1313898 | + | 618 | WP_038272147.1 | glycoside hydrolase family 25 protein | - |
| PLS229_RS05585 () | 1314683..1314788 | + | 106 | Protein_1078 | phage antirepressor protein | - |
| PLS229_RS05590 () | 1314837..1315037 | + | 201 | WP_038272149.1 | hypothetical protein | - |
| PLS229_RS05595 () | 1315159..1315456 | + | 298 | Protein_1080 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| PLS229_RS05600 () | 1315453..1315752 | + | 300 | WP_171898051.1 | putative addiction module antidote protein | - |
| PLS229_RS05605 () | 1316068..1316436 | + | 369 | WP_038272150.1 | DUF4054 domain-containing protein | - |
| PLS229_RS05610 () | 1316484..1317050 | - | 567 | WP_038272151.1 | pilin | - |
| PLS229_RS05615 () | 1317098..1317553 | - | 456 | WP_160199346.1 | hypothetical protein | - |
| PLS229_RS05620 () | 1317592..1317921 | + | 330 | Protein_1085 | hypothetical protein | - |
| PLS229_RS05625 () | 1317968..1318588 | + | 621 | Protein_1086 | VWA domain-containing protein | - |
| PLS229_RS05630 () | 1318716..1319228 | + | 513 | WP_038272154.1 | hypothetical protein | - |
| PLS229_RS05635 () | 1319231..1319650 | + | 420 | WP_038272155.1 | hypothetical protein | - |
| PLS229_RS05640 () | 1320002..1320397 | - | 396 | WP_038272158.1 | type II toxin-antitoxin system VapC family toxin | - |
| PLS229_RS05645 () | 1320394..1320660 | - | 267 | WP_038272159.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | - |
| PLS229_RS05650 () | 1320778..1321218 | - | 441 | WP_069636219.1 | hypothetical protein | - |
| PLS229_RS05655 () | 1321363..1321623 | + | 261 | WP_152536649.1 | hypothetical protein | - |
| PLS229_RS05660 () | 1321654..1321836 | + | 183 | WP_114867114.1 | hypothetical protein | - |
| PLS229_RS05665 () | 1322267..1323415 | + | 1149 | WP_038273097.1 | replication initiation factor domain-containing protein | - |
| PLS229_RS05670 () | 1323461..1323754 | + | 294 | WP_038273093.1 | hypothetical protein | - |
| PLS229_RS05675 () | 1323757..1323963 | + | 207 | WP_038273092.1 | hypothetical protein | - |
| PLS229_RS05680 () | 1323972..1324190 | + | 219 | WP_051482398.1 | phage coat protein | - |
| PLS229_RS05685 () | 1324658..1325725 | + | 1068 | WP_152536670.1 | hypothetical protein | - |
| PLS229_RS05690 () | 1325729..1326070 | + | 342 | WP_038273089.1 | DUF2523 domain-containing protein | - |
| PLS229_RS05695 () | 1326070..1327218 | + | 1149 | WP_069636227.1 | hypothetical protein | - |
| PLS229_RS05700 () | 1327223..1327534 | - | 312 | WP_038271291.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| PLS229_RS05705 () | 1327522..1327794 | - | 273 | WP_038271292.1 | CopG family ribbon-helix-helix protein | Antitoxin Detail |
| PLS229_RS05710 () | 1328136..1329008 | + | 873 | WP_051482318.1 | site-specific integrase | - |
| PLS229_RS05715 () | 1329021..1329413 | - | 393 | WP_051482319.1 | hypothetical protein | - |
| PLS229_RS05720 () | 1329600..1329758 | - | 159 | WP_160165178.1 | hypothetical protein | - |
| PLS229_RS05725 () | 1329755..1330333 | - | 579 | WP_081755441.1 | lysozyme | - |
| PLS229_RS05730 () | 1330349..1330561 | - | 213 | WP_038271294.1 | hypothetical protein | - |
| PLS229_RS05735 () | 1330639..1331013 | - | 375 | WP_038271295.1 | DUF2190 family protein | - |
| PLS229_RS05740 () | 1331076..1333331 | - | 2256 | WP_081755442.1 | Clp protease ClpP | - |
| PLS229_RS05745 () | 1333328..1334887 | - | 1560 | WP_038271296.1 | phage portal protein | - |
| PLS229_RS05750 () | 1334884..1335099 | - | 216 | WP_038271297.1 | hypothetical protein | - |
| PLS229_RS05755 () | 1335294..1335620 | + | 327 | WP_038271298.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| PLS229_RS05760 () | 1335714..1336028 | + | 315 | WP_038271299.1 | addiction module antidote protein | - |
| PLS229_RS05765 () | 1336171..1336449 | - | 279 | WP_038271300.1 | hypothetical protein | - |
| PLS229_RS05770 () | 1337126..1337377 | + | 252 | WP_038271367.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | - |
| PLS229_RS05775 () | 1337374..1337772 | + | 399 | WP_038271302.1 | type II toxin-antitoxin system VapC family toxin | - |
| PLS229_RS05780 () | 1339464..1339769 | - | 306 | WP_051482325.1 | metalloregulator ArsR/SmtB family transcription factor | - |
| PLS229_RS05785 () | 1339799..1340161 | - | 363 | WP_051482320.1 | rhodanese-like domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|