MGE detailed information
MGE type: Prophage MGE length: 12880 bp
Accession: NZ_CP053607 Location: 4473518..4486397 Organism: Escherichia coli strain NEB5-alpha_F'Iq Replicon: chromosome
Accession: NZ_CP053607 Location: 4473518..4486397 Organism: Escherichia coli strain NEB5-alpha_F'Iq Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HO392_RS21540 () | 4469094..4469876 | - | 783 | WP_000082780.1 | DeoR/GlpR family DNA-binding transcription regulator | - |
| HO392_RS21545 () | 4469893..4470525 | - | 633 | WP_000600622.1 | ribulose-phosphate 3 epimerase family protein | - |
| HO392_RS21550 () | 4470537..4470968 | - | 432 | WP_000606406.1 | PTS sugar transporter subunit IIA | - |
| HO392_RS21555 () | 4471099..4471905 | - | 807 | WP_000118626.1 | BtpA family protein SgcQ | - |
| HO392_RS21560 () | 4471918..4473231 | - | 1314 | WP_000460842.1 | galactitol-specific PTS transporter subunit IIC | - |
| HO392_RS21565 () | 4473243..4473521 | - | 279 | WP_000722973.1 | PTS sugar transporter subunit IIB | - |
| HO392_RS21570 () | 4473518..4474639 | - | 1122 | WP_000010829.1 | M42 family metallopeptidase | - |
| HO392_RS23395 () | 4474884..4475000 | - | 117 | Protein_4196 | VOC family protein | - |
| HO392_RS21575 () | 4475038..4475256 | - | 219 | Protein_4197 | hypothetical protein | - |
| HO392_RS21580 () | 4475425..4476171 | - | 747 | WP_000354251.1 | class I SAM-dependent methyltransferase | - |
| HO392_RS21585 () | 4476227..4476772 | - | 546 | WP_001309181.1 | N-acetyltransferase | Antitoxin Detail |
| HO392_RS21590 () | 4476784..4477041 | - | 258 | WP_001054376.1 | hypothetical protein | Toxin Detail |
| HO392_RS21595 () | 4477418..4477663 | - | 246 | Protein_4201 | GNAT family N-acetyltransferase | - |
| HO392_RS21600 () | 4477779..4479019 | + | 1241 | Protein_4202 | DNA helicase | - |
| HO392_RS21605 () | 4479602..4480582 | - | 981 | WP_000991438.1 | 9-O-acetyl-N-acetylneuraminic acid deacetylase | - |
| HO392_RS21610 () | 4480647..4481753 | - | 1107 | WP_001309184.1 | N-acetylneuraminate epimerase | - |
| HO392_RS21615 () | 4481773..4482489 | - | 717 | WP_001295734.1 | N-acetylneuraminic acid outer membrane channel NanC | - |
| HO392_RS21620 () | 4483945..4484547 | + | 603 | WP_000790589.1 | Tyrosine recombinase XerC | VF |
| HO392_RS21625 () | 4485093..4485790 | + | 698 | Protein_4207 | IS1 family transposase IS1A | Transposase |
| HO392_RS21630 () | 4485783..4486397 | + | 615 | WP_038404959.1 | Tyrosine recombinase XerD | VF |
| HO392_RS21635 () | 4486879..4487427 | + | 549 | WP_000695564.1 | type 1 fimbrial major subunit FimA | - |
| HO392_RS21640 () | 4487492..4488031 | + | 540 | WP_000824114.1 | type 1 fimbrial protein | - |
| HO392_RS21645 () | 4488068..4488793 | + | 726 | WP_000066547.1 | type 1 fimbria chaperone FimC | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|