MGE detailed information
MGE type: Genomic_island MGE length: 16253 bp
Accession: NZ_CP053604 Location: 4614697..4630949 Organism: Escherichia coli strain NEB10-beta Replicon: chromosome
Accession: NZ_CP053604 Location: 4614697..4630949 Organism: Escherichia coli strain NEB10-beta Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HO394_RS22250 () | 4610388..4611701 | - | 1314 | WP_000460843.1 | galactitol-specific PTS transporter subunit IIC | - |
| HO394_RS22255 () | 4611713..4611991 | - | 279 | WP_000722973.1 | PTS sugar transporter subunit IIB | - |
| HO394_RS22260 () | 4611988..4613109 | - | 1122 | WP_000010829.1 | M42 family metallopeptidase | - |
| HO394_RS22265 () | 4613508..4613726 | - | 219 | Protein_4333 | hypothetical protein | - |
| HO394_RS22270 () | 4613895..4614641 | - | 747 | WP_000354251.1 | class I SAM-dependent methyltransferase | - |
| HO394_RS22275 () | 4614697..4615242 | - | 546 | WP_001309181.1 | N-acetyltransferase | Antitoxin Detail |
| HO394_RS22280 () | 4615254..4615511 | - | 258 | WP_001054376.1 | hypothetical protein | Toxin Detail |
| HO394_RS22285 () | 4615888..4616133 | - | 246 | Protein_4337 | GNAT family N-acetyltransferase | - |
| HO394_RS22290 () | 4616503..4617489 | + | 987 | WP_001323209.1 | hypothetical protein | - |
| HO394_RS22295 () | 4618072..4619052 | - | 981 | WP_000991438.1 | 9-O-acetyl-N-acetylneuraminic acid deacetylase | - |
| HO394_RS22300 () | 4619117..4620223 | - | 1107 | WP_001309184.1 | N-acetylneuraminate epimerase | - |
| HO394_RS22305 () | 4620243..4620959 | - | 717 | WP_001295734.1 | N-acetylneuraminic acid outer membrane channel NanC | - |
| HO394_RS22310 () | 4622229..4623437 | - | 1209 | WP_006250222.1 | IS4-like element ISVsa5 family transposase | - |
| HO394_RS22315 () | 4623544..4625553 | - | 2010 | Protein_4343 | phosphatidylglycerol--membrane-oligosaccharide glycerophosphotransferase | - |
| HO394_RS22320 () | 4625807..4626301 | - | 495 | WP_001308243.1 | DUF2501 domain-containing protein | - |
| HO394_RS22325 () | 4626350..4627087 | - | 738 | WP_000799911.1 | DNA replication protein DnaC | - |
| HO394_RS22330 () | 4627090..4627629 | - | 540 | WP_000098818.1 | primosomal protein DnaT | - |
| HO394_RS22335 () | 4627736..4628209 | - | 474 | WP_000538191.1 | threonine/serine exporter | - |
| HO394_RS22340 () | 4628200..4628970 | - | 771 | WP_001338213.1 | threonine/serine exporter ThrE family protein | - |
| HO394_RS22345 () | 4629589..4630314 | + | 726 | WP_000936635.1 | response regulator transcription factor | - |
| HO394_RS22350 () | 4630272..4630949 | + | 678 | WP_001301727.1 | DNA-binding transcriptional activator BglJ | - |
| HO394_RS22355 () | 4630987..4631775 | - | 789 | WP_000331618.1 | siderophore-iron reductase FhuF | - |
| HO394_RS22360 () | 4631916..4632152 | + | 237 | WP_001393508.1 | DUF1435 domain-containing protein | - |
| HO394_RS22380 () | 4632781..4633812 | - | 1032 | WP_001272330.1 | 16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC | - |
| HO394_RS22385 () | 4633915..4634328 | + | 414 | WP_000204012.1 | DNA polymerase III subunit psi | - |
| HO394_RS22390 () | 4634297..4634743 | + | 447 | WP_001092461.1 | ribosomal protein S18-alanine N-acetyltransferase | - |
| HO394_RS22395 () | 4634758..4635435 | + | 678 | WP_000870710.1 | pyrimidine 5'-nucleotidase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli K-12 strain ER3413 | Genomic island | TA20047 | CP009789 | 4505469..4521845 | 0.002 | |
| Escherichia coli str. K-12 substr. DH10B | Genomic island | TA22706 | NC_010473 | 4633070..4649322 | 0 |