MGE detailed information
MGE type: Genomic_island MGE length: 22659 bp
Accession: NZ_CP053603 Location: 3504307..3526965 Organism: Escherichia coli strain Dam/Dcm Replicon: chromosome
Accession: NZ_CP053603 Location: 3504307..3526965 Organism: Escherichia coli strain Dam/Dcm Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HO395_RS16915 () | 3499757..3500617 | + | 861 | WP_000809262.1 | 16S rRNA (cytidine(1402)-2'-O)-methyltransferase | - |
| HO395_RS16920 () | 3500660..3501751 | - | 1092 | WP_000816992.1 | fimbrial protein | - |
| HO395_RS16925 () | 3501762..3504278 | - | 2517 | WP_001355538.1 | fimbrial biogenesis outer membrane usher protein | - |
| HO395_RS16930 () | 3504307..3505002 | - | 696 | WP_000044775.1 | hypothetical protein | VF |
| HO395_RS16935 () | 3505082..3505666 | - | 585 | WP_001045432.1 | type 1 fimbrial protein | - |
| HO395_RS16940 () | 3506067..3506822 | - | 756 | WP_001311150.1 | galactosamine-6-phosphate isomerase | - |
| HO395_RS16945 () | 3506823..3507614 | - | 792 | WP_000534347.1 | PTS N-acetylgalactosamine transporter subunit IID | - |
| HO395_RS16950 () | 3507604..3508407 | - | 804 | WP_000544489.1 | PTS N-acetylgalactosamine transporter subunit IIC | - |
| HO395_RS16955 () | 3508446..3508922 | - | 477 | WP_000203711.1 | PTS N-acetylgalactosamine transporter subunit IIB | - |
| HO395_RS16960 () | 3509089..3509949 | - | 861 | WP_000022766.1 | tagatose-bisphosphate aldolase subunit KbaY | - |
| HO395_RS16965 () | 3509962..3511116 | - | 1155 | WP_001114869.1 | AgaS family sugar isomerase | - |
| HO395_RS16970 () | 3511467..3512024 | - | 558 | Protein_3310 | amidohydrolase family protein | - |
| HO395_RS16975 () | 3512020..3512391 | - | 372 | Protein_3311 | PTS sugar transporter subunit IIC | - |
| HO395_RS16980 () | 3512402..3512875 | - | 474 | WP_001336162.1 | PTS N-acetylgalactosamine transporter subunit IIB | - |
| HO395_RS16985 () | 3512898..3514178 | - | 1281 | WP_001698595.1 | tagatose-bisphosphate aldolase subunit KbaZ | - |
| HO395_RS16990 () | 3514427..3515236 | + | 810 | WP_000072187.1 | aga operon transcriptional regulator AgaR | - |
| HO395_RS16995 () | 3515291..3515755 | - | 465 | WP_000347273.1 | type II toxin-antitoxin system ribonuclease toxin YhaV | Toxin Detail |
| HO395_RS17000 () | 3515755..3516090 | - | 336 | WP_001307405.1 | type II toxin-antitoxin system antitoxin PrlF | Antitoxin Detail |
| HO395_RS17005 () | 3516239..3517810 | - | 1572 | WP_001273753.1 | galactarate dehydratase | - |
| HO395_RS17010 () | 3518185..3519519 | + | 1335 | WP_000599636.1 | galactarate/glucarate/glycerate transporter GarP | - |
| HO395_RS17015 () | 3519535..3520305 | + | 771 | WP_001058209.1 | 2-dehydro-3-deoxyglucarate aldolase | - |
| HO395_RS17020 () | 3520335..3521225 | + | 891 | WP_001303675.1 | 2-hydroxy-3-oxopropionate reductase | - |
| HO395_RS17025 () | 3521322..3522467 | + | 1146 | WP_001300387.1 | glycerate 2-kinase | - |
| HO395_RS17035 () | 3523490..3524677 | - | 1188 | WP_000484600.1 | YhaC family protein | - |
| HO395_RS17040 () | 3524699..3525238 | - | 540 | WP_000675733.1 | hypothetical protein | - |
| HO395_RS17045 () | 3525494..3525838 | - | 345 | WP_000145840.1 | transcriptional activator TdcR | - |
| HO395_RS17050 () | 3526027..3526965 | + | 939 | WP_000104211.1 | transcriptional regulator TdcA | - |
| HO395_RS17055 () | 3527064..3528053 | + | 990 | WP_000548347.1 | bifunctional threonine ammonia-lyase/L-serine ammonia-lyase TdcB | - |
| HO395_RS17060 () | 3528075..3529406 | + | 1332 | WP_000107723.1 | threonine/serine transporter TdcC | - |
| HO395_RS17065 () | 3529432..3530640 | + | 1209 | WP_001295545.1 | propionate kinase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|