MGE detailed information
MGE type: Prophage MGE length: 18864 bp
Accession: NZ_CP053603 Location: 263109..281972 Organism: Escherichia coli strain Dam/Dcm Replicon: chromosome
Accession: NZ_CP053603 Location: 263109..281972 Organism: Escherichia coli strain Dam/Dcm Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HO395_RS01215 () | 258606..259007 | + | 402 | WP_000174689.1 | sigma factor-binding protein Crl | - |
| HO395_RS01220 () | 259046..260101 | - | 1056 | WP_000749863.1 | phosphoporin PhoE | - |
| HO395_RS01225 () | 260389..261492 | + | 1104 | WP_001285288.1 | glutamate 5-kinase | - |
| HO395_RS01230 () | 261504..262757 | + | 1254 | WP_000893278.1 | glutamate-5-semialdehyde dehydrogenase | - |
| HO395_RS01240 () | 263329..263670 | - | 342 | WP_000854672.1 | type IV toxin-antitoxin system toxin YkfI | Toxin Detail |
| HO395_RS01245 () | 263691..264008 | - | 318 | WP_000070395.1 | type IV toxin-antitoxin system antitoxin YafW | Antitoxin Detail |
| HO395_RS01250 () | 264027..264248 | - | 222 | WP_000691994.1 | DUF987 domain-containing protein | - |
| HO395_RS01255 () | 264257..264733 | - | 477 | WP_000811693.1 | RadC family protein | - |
| HO395_RS01260 () | 264749..265207 | - | 459 | WP_000211838.1 | antirestriction protein | - |
| HO395_RS01265 () | 265305..265544 | - | 240 | WP_000194654.1 | DUF905 domain-containing protein | - |
| HO395_RS01270 () | 265621..266088 | - | 468 | WP_001547765.1 | hypothetical protein | - |
| HO395_RS01275 () | 266111..266554 | - | 444 | WP_000824223.1 | hypothetical protein | - |
| HO395_RS01280 () | 266554..266781 | - | 228 | WP_001548158.1 | hypothetical protein | - |
| HO395_RS01285 () | 266777..266968 | - | 192 | Protein_248 | DeoR family transcriptional regulator | - |
| HO395_RS01290 () | 267185..268006 | - | 822 | WP_000197389.1 | DUF945 domain-containing protein | - |
| HO395_RS01295 () | 268098..268961 | - | 864 | WP_001065553.1 | GTPase family protein | - |
| HO395_RS01300 () | 269290..270183 | - | 894 | WP_000770246.1 | LysR family transcriptional regulator | - |
| HO395_RS01305 () | 270279..270536 | + | 258 | Protein_252 | IS3 family transposase ISEc52 | Transposase |
| HO395_RS01310 () | 270604..271755 | + | 1152 | WP_001254938.1 | IS30 family transposase IS30D | Transposase |
| HO395_RS01315 () | 271765..272190 | + | 426 | Protein_254 | IS3 family transposase | - |
| HO395_RS01320 () | 272863..273954 | + | 1092 | Protein_255 | group II intron reverse transcriptase/maturase | - |
| HO395_RS01325 () | 274102..275118 | - | 1017 | WP_010723085.1 | IS5 family transposase IS5D | Transposase |
| HO395_RS01330 () | 275326..276729 | + | 1404 | WP_001393629.1 | S-methylmethionine permease | - |
| HO395_RS01335 () | 276716..277648 | + | 933 | WP_000081352.1 | homocysteine S-methyltransferase | - |
| HO395_RS01340 () | 277757..278803 | - | 1047 | WP_000192349.1 | Vitamin B12 import ATP-binding protein BtuD | VF |
| HO395_RS01345 () | 278815..279162 | - | 348 | Protein_260 | ABC transporter permease subunit | - |
| HO395_RS01350 () | 279179..279876 | - | 698 | Protein_261 | IS1 family transposase IS1R | Transposase |
| HO395_RS01355 () | 279932..280105 | + | 174 | Protein_262 | IS30 family transposase | - |
| HO395_RS01360 () | 280025..280363 | - | 339 | WP_000015532.1 | IS3 family transposase ISEhe3 | Transposase |
| HO395_RS01365 () | 280386..280736 | - | 351 | WP_001030800.1 | type IV toxin-antitoxin system antitoxin YagB | - |
| HO395_RS01370 () | 280830..281984 | - | 1155 | WP_010723086.1 | IS481 family transposase ISEc19 | Transposase |
| HO395_RS01375 () | 282279..283187 | + | 909 | WP_001136613.1 | 2-keto-3-deoxygluconate aldolase | - |
| HO395_RS01380 () | 283202..285169 | + | 1968 | WP_000151261.1 | xylonate dehydratase YagF | - |
| HO395_RS01385 () | 285396..286778 | + | 1383 | WP_000192863.1 | MFS transporter | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|