NZ_CP0536021537621..1551837

MGE detailed information

MGE type: Genomic_island        MGE length: 14217 bp
Accession: NZ_CP053602        Location: 1537621..1551837         Organism: Escherichia coli BL21(DE3)       Replicon: chromosome


Gene structure


The 5 kb flanking regions of this MGE are displayed.

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
HO396_RS07550 () 1534436..1536121 - 1686 WP_000628583.1 ABC transporter ATP-binding protein/permease -
HO396_RS07555 () 1536324..1536446 + 123 WP_120795387.1 protein YneP -
HO396_RS07560 () 1536412..1537569 - 1158 WP_001301030.1 anaerobic sulfatase maturase -
HO396_RS07565 () 1537621..1539303 - 1683 WP_001318307.1 sulfatase -
HO396_RS07570 () 1539705..1540466 - 762 WP_000060493.1 acid stress response transcriptional regulator YdeO -
HO396_RS07575 () 1540541..1540738 - 198 WP_000543384.1 two-component system connector SafA -
HO396_RS07580 () 1540986..1543265 - 2280 WP_000726691.1 acid resistance putative oxidoreductase YdeP -
HO396_RS07585 () 1543599..1544513 - 915 WP_000520676.1 Type 1 fimbrin D-mannose specific adhesin VF
HO396_RS07590 () 1544572..1545075 - 504 WP_000825452.1 Protein FimG VF
HO396_RS07595 () 1545088..1545618 - 531 WP_000876763.1 Protein FimF VF
HO396_RS07600 () 1545632..1546780 - 1149 WP_000017447.1 Outer membrane usher protein FimD VF
HO396_RS07605 () 1546844..1547977 - 1134 WP_001354080.1 Outer membrane usher protein FimD VF
HO396_RS07610 () 1547932..1548282 - 351 WP_001354079.1 Outer membrane usher protein FimD VF
HO396_RS07615 () 1548324..1549034 - 711 Protein_1490 Chaperone protein FocC VF
HO396_RS07620 () 1549395..1549877 - 483 WP_000931227.1 Type-1 fimbrial protein, A chain VF
HO396_RS07625 () 1550249..1551571 - 1323 WP_001125439.1 type II toxin-antitoxin system serine/threonine protein kinase toxin HipA Toxin Detail
HO396_RS07630 () 1551571..1551837 - 267 WP_001301023.1 type II toxin-antitoxin system antitoxin HipB Antitoxin Detail
HO396_RS07635 () 1552060..1553640 - 1581 Protein_1494 autotransporter outer membrane beta-barrel domain-containing protein -
HO396_RS07640 () 1553636..1554412 + 777 Protein_1495 histidine kinase -
HO396_RS07645 () 1554424..1555446 + 1023 WP_000172488.1 autoinducer 2 ABC transporter substrate-binding protein LsrB -
HO396_RS07650 () 1555473..1556348 + 876 WP_000774188.1 3-hydroxy-5-phosphonooxypentane-2,4-dione thiolase -
HO396_RS07655 () 1556372..1556662 + 291 WP_000558527.1 (4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase -

Similar MGE(s)


Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.

Detail Organism MGE type Related TA Genome accession Coordinates Mash
distance
Escherichia coli K-12 strain ER3413 Genomic island TA20025 CP009789 1561271..1572871 0.009
Escherichia coli str. K-12 substr. MC4100 Genomic island TA20066 HG738867 1469371..1480971 0.009
Escherichia coli str. K-12 substr. MG1655 Genomic island TA1040 NC_000913 1580842..1592442 0.009
Escherichia coli str. K-12 substr. W3110 Genomic island TA21437 NC_007779 1582556..1594156 0.009
Escherichia coli HS Genomic island TA22421 NC_009800 1597665..1609265 0.007
Escherichia coli BW2952 Genomic island TA23853 NC_012759 1470925..1482525 0.009
Escherichia coli DH1 Genomic island TA27403 NC_017638 1563024..1574624 0.009
Escherichia coli str. K-12 substr. MDS42 Genomic island TA29002 NC_020518 1287669..1299269 0.009
Escherichia coli BW25113 Genomic island TA48682 NZ_CP009273 1575099..1586699 0.009
Escherichia coli str. K-12 substr. W3110 strain K-12 substr. ZK126 Genomic island TA68424 NZ_CP017979 1484612..1496212 0.009
Escherichia coli strain DH5alpha Genomic island TA90478 NZ_CP025520 438284..449884 0.009
Escherichia coli str. K-12 substr. MC4100 strain K-12 Genomic island TA285016 NZ_HG738867 1469371..1480971 0.009