MGE detailed information
MGE type: Genomic_island MGE length: 20587 bp
Accession: NZ_CP053599 Location: 4382575..4403161 Organism: Escherichia coli strain NEBExpress Replicon: chromosome
Accession: NZ_CP053599 Location: 4382575..4403161 Organism: Escherichia coli strain NEBExpress Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HO399_RS21060 () | 4380198..4381139 | - | 942 | WP_000767337.1 | bifunctional riboflavin kinase/FAD synthetase | - |
| HO399_RS21065 () | 4381147..4381365 | - | 219 | WP_001300728.1 | DUF2575 family protein | - |
| HO399_RS21070 () | 4381468..4381731 | + | 264 | WP_001274021.1 | 30S ribosomal protein S20 | - |
| HO399_RS21075 () | 4382214..4382560 | + | 347 | Protein_4101 | pentapeptide repeat-containing protein | - |
| HO399_RS21080 () | 4382575..4383272 | - | 698 | Protein_4102 | IS1 family transposase IS1R | Transposase |
| HO399_RS21085 () | 4383462..4384244 | - | 783 | WP_000082780.1 | DeoR/GlpR family DNA-binding transcription regulator | - |
| HO399_RS21090 () | 4384261..4384893 | - | 633 | WP_000600622.1 | ribulose-phosphate 3 epimerase family protein | - |
| HO399_RS21095 () | 4384905..4385336 | - | 432 | WP_000606406.1 | PTS sugar transporter subunit IIA | - |
| HO399_RS21100 () | 4385467..4386273 | - | 807 | WP_000118626.1 | BtpA family protein SgcQ | - |
| HO399_RS21105 () | 4386286..4387599 | - | 1314 | WP_000460843.1 | galactitol-specific PTS transporter subunit IIC | - |
| HO399_RS21110 () | 4387611..4387889 | - | 279 | WP_000722973.1 | PTS sugar transporter subunit IIB | - |
| HO399_RS21115 () | 4387886..4389007 | - | 1122 | WP_000010829.1 | M42 family metallopeptidase | - |
| HO399_RS21615 () | 4389252..4389368 | - | 117 | Protein_4110 | VOC family protein | - |
| HO399_RS21120 () | 4389406..4389624 | - | 219 | Protein_4111 | hypothetical protein | - |
| HO399_RS21125 () | 4389793..4390539 | - | 747 | WP_000354251.1 | class I SAM-dependent methyltransferase | - |
| HO399_RS21130 () | 4390595..4391140 | - | 546 | WP_001309181.1 | N-acetyltransferase | Antitoxin Detail |
| HO399_RS21135 () | 4391152..4391409 | - | 258 | WP_001054376.1 | hypothetical protein | Toxin Detail |
| HO399_RS21140 () | 4391786..4392031 | - | 246 | Protein_4115 | GNAT family N-acetyltransferase | - |
| HO399_RS21145 () | 4392401..4393387 | + | 987 | Protein_4116 | hypothetical protein | - |
| HO399_RS21150 () | 4393970..4394950 | - | 981 | WP_000991438.1 | 9-O-acetyl-N-acetylneuraminic acid deacetylase | - |
| HO399_RS21155 () | 4395015..4396121 | - | 1107 | WP_001309184.1 | N-acetylneuraminate epimerase | - |
| HO399_RS21160 () | 4396141..4396857 | - | 717 | WP_001295734.1 | N-acetylneuraminic acid outer membrane channel NanC | - |
| HO399_RS21165 () | 4398313..4398795 | + | 483 | Protein_4120 | Tyrosine recombinase XerC | VF |
| HO399_RS21170 () | 4398804..4399501 | - | 698 | Protein_4121 | IS1 family transposase IS1A | Transposase |
| HO399_RS21175 () | 4399557..4399691 | + | 135 | Protein_4122 | integrase | - |
| HO399_RS21180 () | 4400169..4400765 | + | 597 | WP_000044711.1 | Tyrosine recombinase XerC | VF |
| HO399_RS21185 () | 4401247..4401795 | + | 549 | WP_000695564.1 | hypothetical protein | VF |
| HO399_RS21190 () | 4401860..4402399 | + | 540 | WP_000824114.1 | hypothetical protein | VF |
| HO399_RS21195 () | 4402436..4403161 | + | 726 | WP_000066560.1 | hypothetical protein | VF |
| HO399_RS21200 () | 4403228..4405864 | + | 2637 | WP_000121002.1 | fimbrial usher FimD | - |
| HO399_RS21205 () | 4405874..4406404 | + | 531 | WP_001244827.1 | type 1 fimbria minor subunit FimF | - |
| HO399_RS21210 () | 4406417..4406920 | + | 504 | WP_000870592.1 | type 1 fimbria minor subunit FimG | - |
| HO399_RS21215 () | 4406940..4407842 | + | 903 | WP_000832243.1 | type 1 fimbria D-mannose specific adhesin FimH | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|