MGE detailed information
MGE type: Genomic_island MGE length: 20587 bp
Accession: NZ_CP053592 Location: 4382545..4403131 Organism: Escherichia coli strain NEBExpress_Iq Replicon: chromosome
Accession: NZ_CP053592 Location: 4382545..4403131 Organism: Escherichia coli strain NEBExpress_Iq Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HO403_RS21085 () | 4380168..4381109 | - | 942 | WP_000767337.1 | bifunctional riboflavin kinase/FAD synthetase | - |
| HO403_RS21090 () | 4381117..4381335 | - | 219 | WP_001300728.1 | DUF2575 family protein | - |
| HO403_RS21095 () | 4381438..4381701 | + | 264 | WP_001274021.1 | 30S ribosomal protein S20 | - |
| HO403_RS21100 () | 4382184..4382530 | + | 347 | Protein_4106 | pentapeptide repeat-containing protein | - |
| HO403_RS21105 () | 4382545..4383242 | - | 698 | Protein_4107 | IS1 family transposase IS1R | Transposase |
| HO403_RS21110 () | 4383432..4384214 | - | 783 | WP_000082780.1 | DeoR/GlpR family DNA-binding transcription regulator | - |
| HO403_RS21115 () | 4384231..4384863 | - | 633 | WP_000600622.1 | ribulose-phosphate 3 epimerase family protein | - |
| HO403_RS21120 () | 4384875..4385306 | - | 432 | WP_000606406.1 | PTS sugar transporter subunit IIA | - |
| HO403_RS21125 () | 4385437..4386243 | - | 807 | WP_000118626.1 | BtpA family protein SgcQ | - |
| HO403_RS21130 () | 4386256..4387569 | - | 1314 | WP_000460843.1 | galactitol-specific PTS transporter subunit IIC | - |
| HO403_RS21135 () | 4387581..4387859 | - | 279 | WP_000722973.1 | PTS sugar transporter subunit IIB | - |
| HO403_RS21140 () | 4387856..4388977 | - | 1122 | WP_000010829.1 | M42 family metallopeptidase | - |
| HO403_RS21145 () | 4389376..4389594 | - | 219 | Protein_4115 | hypothetical protein | - |
| HO403_RS21150 () | 4389763..4390509 | - | 747 | WP_000354251.1 | class I SAM-dependent methyltransferase | - |
| HO403_RS21155 () | 4390565..4391110 | - | 546 | WP_001309181.1 | N-acetyltransferase | Antitoxin Detail |
| HO403_RS21160 () | 4391122..4391379 | - | 258 | WP_001054376.1 | hypothetical protein | Toxin Detail |
| HO403_RS21165 () | 4391756..4392001 | - | 246 | Protein_4119 | GNAT family N-acetyltransferase | - |
| HO403_RS21170 () | 4392371..4393357 | + | 987 | Protein_4120 | hypothetical protein | - |
| HO403_RS21175 () | 4393940..4394920 | - | 981 | WP_000991438.1 | 9-O-acetyl-N-acetylneuraminic acid deacetylase | - |
| HO403_RS21180 () | 4394985..4396091 | - | 1107 | WP_001309184.1 | N-acetylneuraminate epimerase | - |
| HO403_RS21185 () | 4396111..4396827 | - | 717 | WP_001295734.1 | N-acetylneuraminic acid outer membrane channel NanC | - |
| HO403_RS21190 () | 4398283..4398765 | + | 483 | Protein_4124 | Tyrosine recombinase XerC | VF |
| HO403_RS21195 () | 4398774..4399471 | - | 698 | Protein_4125 | IS1 family transposase IS1A | Transposase |
| HO403_RS21200 () | 4399527..4399661 | + | 135 | Protein_4126 | integrase | - |
| HO403_RS21205 () | 4400139..4400735 | + | 597 | WP_000044711.1 | Tyrosine recombinase XerC | VF |
| HO403_RS21210 () | 4401217..4401765 | + | 549 | WP_000695564.1 | hypothetical protein | VF |
| HO403_RS21215 () | 4401830..4402369 | + | 540 | WP_000824114.1 | hypothetical protein | VF |
| HO403_RS21220 () | 4402406..4403131 | + | 726 | WP_000066560.1 | hypothetical protein | VF |
| HO403_RS21225 () | 4403198..4405834 | + | 2637 | WP_000121002.1 | fimbrial usher FimD | - |
| HO403_RS21230 () | 4405844..4406374 | + | 531 | WP_001244827.1 | type 1 fimbria minor subunit FimF | - |
| HO403_RS21235 () | 4406387..4406890 | + | 504 | WP_000870592.1 | type 1 fimbria minor subunit FimG | - |
| HO403_RS21240 () | 4406910..4407812 | + | 903 | WP_000832243.1 | type 1 fimbria D-mannose specific adhesin FimH | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|