MGE detailed information
MGE type: Genomic_island MGE length: 16315 bp
Accession: NZ_CP053398 Location: 4361412..4377726 Organism: Serratia plymuthica strain C-1 Replicon: chromosome
Accession: NZ_CP053398 Location: 4361412..4377726 Organism: Serratia plymuthica strain C-1 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HL670_RS20170 () | 4357454..4357708 | + | 255 | WP_004949355.1 | type B 50S ribosomal protein L31 | - |
| HL670_RS20175 () | 4357721..4357861 | + | 141 | WP_004949353.1 | type B 50S ribosomal protein L36 | - |
| HL670_RS20180 () | 4357976..4358854 | - | 879 | WP_006323980.1 | metal ABC transporter substrate-binding protein | - |
| HL670_RS20185 () | 4358880..4359737 | - | 858 | WP_004949351.1 | metal ABC transporter permease | - |
| HL670_RS20190 () | 4359734..4360447 | - | 714 | WP_171407126.1 | ABC transporter ATP-binding protein | - |
| HL670_RS20195 () | 4360899..4361252 | + | 354 | WP_004949349.1 | hypothetical protein | - |
| HL670_RS20200 () | 4361412..4361780 | + | 369 | WP_004949348.1 | Hha toxicity modulator TomB | Antitoxin Detail |
| HL670_RS20205 () | 4361831..4362034 | + | 204 | WP_006322256.1 | hemolysin expression modulator Hha | Toxin Detail |
| HL670_RS20210 () | 4362274..4362809 | - | 536 | Protein_3973 | cytochrome b/b6 domain-containing protein | - |
| HL670_RS20215 () | 4362870..4364291 | - | 1422 | WP_062793128.1 | N-acetylglucosamine-binding protein GbpA | - |
| HL670_RS20220 () | 4364571..4364945 | + | 375 | WP_062793130.1 | type II secretion system pilot lipoprotein GspS | - |
| HL670_RS20225 () | 4364942..4365771 | - | 830 | Protein_3976 | Type 4 prepilin-like proteins leader peptide-processing enzyme | VF |
| HL670_RS20230 () | 4365804..4366265 | - | 462 | WP_062793132.1 | type II secretion system protein M | - |
| HL670_RS20235 () | 4366262..4367392 | - | 1131 | WP_062793135.1 | Type II secretion system protein L | VF |
| HL670_RS20240 () | 4367396..4368331 | - | 936 | WP_062793137.1 | Putative type II secretion system protein K | VF |
| HL670_RS20245 () | 4368328..4368939 | - | 612 | WP_062793139.1 | Type II secretion system protein J | VF |
| HL670_RS20250 () | 4368936..4369313 | - | 378 | WP_171407178.1 | Type II secretion system protein I | VF |
| HL670_RS20255 () | 4369303..4369794 | - | 492 | WP_062793141.1 | type II secretion system minor pseudopilin GspH | - |
| HL670_RS20260 () | 4369794..4370270 | - | 477 | WP_062793143.1 | Type II secretion system protein G | VF |
| HL670_RS20265 () | 4370276..4371487 | - | 1212 | WP_006323952.1 | Type II secretion system protein F | VF |
| HL670_RS20270 () | 4371477..4372973 | - | 1497 | WP_062793145.1 | Type II secretion system protein E | VF |
| HL670_RS20275 () | 4372970..4374937 | - | 1968 | WP_171407127.1 | Type II secretion system protein D | VF |
| HL670_RS20280 () | 4374988..4375494 | - | 507 | WP_062793147.1 | Type II secretion system protein C | VF |
| HL670_RS20285 () | 4375544..4376035 | - | 492 | WP_062793149.1 | hypothetical protein | VF |
| HL670_RS20290 () | 4376447..4376941 | - | 495 | WP_062793151.1 | hypothetical protein | - |
| HL670_RS20295 () | 4376926..4377726 | - | 801 | WP_062793153.1 | winged helix-turn-helix domain-containing protein | - |
| HL670_RS20305 () | 4378325..4378639 | + | 315 | WP_004949344.1 | MGMT family protein | - |
| HL670_RS20310 () | 4378705..4379196 | - | 492 | WP_004949342.1 | YbaY family lipoprotein | - |
| HL670_RS20315 () | 4379427..4380290 | + | 864 | WP_062793155.1 | acyl-CoA thioesterase II | - |
| HL670_RS20320 () | 4380377..4381663 | - | 1287 | WP_062793157.1 | ammonium transporter AmtB | - |
| HL670_RS20325 () | 4381700..4382038 | - | 339 | WP_004949337.1 | P-II family nitrogen regulator | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|