MGE detailed information
MGE type: Prophage MGE length: 37495 bp
Accession: NZ_CP053390 Location: 3861864..3899358 Organism: Pseudomonas aeruginosa strain TL1285 Replicon: chromosome
Accession: NZ_CP053390 Location: 3861864..3899358 Organism: Pseudomonas aeruginosa strain TL1285 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HMJ40_RS17980 (HMJ40_17995) | 3857505..3857900 | + | 396 | WP_003094374.1 | hypothetical protein | - |
| HMJ40_RS17985 (HMJ40_18000) | 3857893..3859269 | + | 1377 | WP_023101553.1 | class II fumarate hydratase FumC | - |
| HMJ40_RS17990 (HMJ40_18005) | 3859297..3859746 | + | 450 | WP_003094369.1 | hypothetical protein | - |
| HMJ40_RS17995 (HMJ40_18010) | 3859759..3860370 | + | 612 | WP_003098862.1 | superoxide dismutase | - |
| HMJ40_RS18000 (HMJ40_18015) | 3860389..3861321 | + | 933 | WP_003120918.1 | ZIP family metal transporter | - |
| HMJ40_RS18005 (HMJ40_18020) | 3861864..3862046 | + | 183 | WP_071534354.1 | type II toxin-antitoxin system HicA family toxin | Toxin Detail |
| HMJ40_RS18010 (HMJ40_18025) | 3862074..3862478 | + | 405 | WP_012077229.1 | type II toxin-antitoxin system HicB family antitoxin | Antitoxin Detail |
| HMJ40_RS18015 (HMJ40_18030) | 3862521..3863492 | - | 972 | WP_012077228.1 | hypothetical protein | - |
| HMJ40_RS18020 (HMJ40_18035) | 3863477..3864175 | - | 699 | WP_033896049.1 | hypothetical protein | - |
| HMJ40_RS18025 (HMJ40_18040) | 3864175..3864714 | - | 540 | WP_012074127.1 | hypothetical protein | - |
| HMJ40_RS18030 (HMJ40_18045) | 3864711..3865631 | - | 921 | WP_012074128.1 | hypothetical protein | - |
| HMJ40_RS18035 (HMJ40_18050) | 3865628..3866338 | - | 711 | WP_012074129.1 | hypothetical protein | - |
| HMJ40_RS18040 (HMJ40_18055) | 3866352..3868316 | - | 1965 | WP_025297588.1 | phage tail protein | - |
| HMJ40_RS18045 (HMJ40_18060) | 3868328..3868852 | - | 525 | WP_012074131.1 | phage tail protein | - |
| HMJ40_RS18050 (HMJ40_18065) | 3868845..3870017 | - | 1173 | WP_012074132.1 | baseplate J/gp47 family protein | - |
| HMJ40_RS18055 (HMJ40_18070) | 3870014..3870334 | - | 321 | WP_012074133.1 | DUF2590 family protein | - |
| HMJ40_RS18060 (HMJ40_18075) | 3870331..3872385 | - | 2055 | WP_012074134.1 | phage tail tape measure protein | - |
| HMJ40_RS18065 (HMJ40_18080) | 3872400..3872540 | - | 141 | WP_012074135.1 | hypothetical protein | - |
| HMJ40_RS18070 (HMJ40_18085) | 3872564..3872851 | - | 288 | WP_012074136.1 | putative phage tail assembly chaperone | - |
| HMJ40_RS18075 (HMJ40_18090) | 3872848..3873333 | - | 486 | WP_012074137.1 | lysis system i-spanin subunit Rz | - |
| HMJ40_RS18080 (HMJ40_18095) | 3873330..3873791 | - | 462 | WP_012074138.1 | lysozyme | - |
| HMJ40_RS18085 (HMJ40_18100) | 3873788..3874093 | - | 306 | WP_025297585.1 | hypothetical protein | - |
| HMJ40_RS18090 (HMJ40_18105) | 3874093..3874302 | - | 210 | WP_012074140.1 | TraR/DksA family transcriptional regulator | - |
| HMJ40_RS18095 (HMJ40_18110) | 3874302..3874751 | - | 450 | WP_012074141.1 | DUF2597 family protein | - |
| HMJ40_RS18100 (HMJ40_18115) | 3874755..3875870 | - | 1116 | WP_012074142.1 | DUF2586 domain-containing protein | - |
| HMJ40_RS18105 (HMJ40_18120) | 3875882..3876547 | - | 666 | WP_012074143.1 | virion morphogenesis protein | - |
| HMJ40_RS18110 (HMJ40_18125) | 3876540..3876977 | - | 438 | WP_012074144.1 | phage tail protein | - |
| HMJ40_RS18115 (HMJ40_18130) | 3876979..3877440 | - | 462 | WP_012074145.1 | head completion/stabilization protein | - |
| HMJ40_RS18120 (HMJ40_18135) | 3877538..3878275 | - | 738 | WP_025297583.1 | phage terminase small subunit | - |
| HMJ40_RS18125 (HMJ40_18140) | 3878272..3879294 | - | 1023 | WP_012074147.1 | phage major capsid protein, P2 family | - |
| HMJ40_RS18130 (HMJ40_18145) | 3879294..3880247 | - | 954 | WP_216787000.1 | GPO family capsid scaffolding protein | - |
| HMJ40_RS18135 (HMJ40_18150) | 3880405..3882453 | + | 2049 | WP_025297581.1 | terminase family protein | - |
| HMJ40_RS18140 (HMJ40_18155) | 3882365..3883219 | + | 855 | WP_025297580.1 | phage portal protein | - |
| HMJ40_RS18145 (HMJ40_18160) | 3883265..3883525 | + | 261 | WP_216787001.1 | ogr/Delta-like zinc finger family protein | - |
| HMJ40_RS18150 (HMJ40_18165) | 3883955..3884350 | - | 396 | WP_216787002.1 | hypothetical protein | - |
| HMJ40_RS18155 (HMJ40_18170) | 3884347..3884577 | - | 231 | WP_012074153.1 | hypothetical protein | - |
| HMJ40_RS18160 (HMJ40_18175) | 3884574..3884789 | - | 216 | WP_012074154.1 | hypothetical protein | - |
| HMJ40_RS18165 (HMJ40_18180) | 3884776..3885189 | - | 414 | WP_025297579.1 | hypothetical protein | - |
| HMJ40_RS18170 (HMJ40_18185) | 3885257..3885613 | - | 357 | WP_012074155.1 | hypothetical protein | - |
| HMJ40_RS18175 (HMJ40_18190) | 3885629..3886030 | - | 402 | WP_012077220.1 | hypothetical protein | - |
| HMJ40_RS18180 (HMJ40_18195) | 3886002..3886202 | - | 201 | WP_012074157.1 | hypothetical protein | - |
| HMJ40_RS18185 (HMJ40_18200) | 3886633..3889326 | - | 2694 | WP_216787003.1 | toprim domain-containing protein | - |
| HMJ40_RS18190 (HMJ40_18205) | 3889337..3889567 | - | 231 | WP_012077218.1 | hypothetical protein | - |
| HMJ40_RS18195 (HMJ40_18210) | 3889662..3889898 | + | 237 | WP_012077217.1 | helix-turn-helix transcriptional regulator | - |
| HMJ40_RS18200 (HMJ40_18215) | 3889903..3891018 | + | 1116 | WP_012077216.1 | NADH pyrophosphatase ; Integrase | Integrase |
| HMJ40_RS18205 (HMJ40_18220) | 3891049..3891321 | - | 273 | WP_003094362.1 | HPr family phosphocarrier protein | - |
| HMJ40_RS18210 (HMJ40_18225) | 3891351..3892211 | - | 861 | WP_003094361.1 | RNase adapter RapZ | - |
| HMJ40_RS18215 (HMJ40_18230) | 3892213..3892677 | - | 465 | WP_003098853.1 | PTS IIA-like nitrogen regulatory protein PtsN | - |
| HMJ40_RS18220 (HMJ40_18235) | 3892691..3892999 | - | 309 | WP_003094359.1 | ribosome-associated translation inhibitor RaiA | - |
| HMJ40_RS18225 (HMJ40_18240) | 3893077..3894570 | - | 1494 | WP_003094357.1 | RNA polymerase factor sigma-54 | - |
| HMJ40_RS18230 (HMJ40_18245) | 3894796..3895521 | - | 726 | WP_216787004.1 | hypothetical protein | VF |
| HMJ40_RS18235 (HMJ40_18250) | 3895521..3896048 | - | 528 | WP_003120916.1 | lipopolysaccharide transport periplasmic protein LptA | - |
| HMJ40_RS18240 (HMJ40_18255) | 3896035..3896607 | - | 573 | WP_003094353.1 | LPS export ABC transporter periplasmic protein LptC | - |
| HMJ40_RS18245 (HMJ40_18260) | 3896616..3897155 | - | 540 | WP_003094350.1 | HAD family hydrolase | - |
| HMJ40_RS18250 (HMJ40_18265) | 3897155..3898135 | - | 981 | WP_003094347.1 | hypothetical protein | VF |
| HMJ40_RS18255 (HMJ40_18270) | 3898549..3899358 | + | 810 | WP_003094343.1 | hypothetical protein | VF |
| HMJ40_RS18260 (HMJ40_18275) | 3899358..3900155 | + | 798 | WP_216787005.1 | lipid asymmetry maintenance ABC transporter permease subunit MlaE | - |
| HMJ40_RS18265 (HMJ40_18280) | 3900156..3900629 | + | 474 | WP_003094339.1 | outer membrane lipid asymmetry maintenance protein MlaD | - |
| HMJ40_RS18270 (HMJ40_18285) | 3900641..3901288 | + | 648 | WP_003094337.1 | phospholipid-binding protein MlaC | - |
| HMJ40_RS18275 (HMJ40_18290) | 3901285..3901593 | + | 309 | WP_003094335.1 | STAS domain-containing protein | - |
| HMJ40_RS18280 (HMJ40_18295) | 3901710..3901949 | + | 240 | WP_003094334.1 | BolA family protein | - |
| HMJ40_RS18285 (HMJ40_18300) | 3901970..3903235 | + | 1266 | WP_003094332.1 | UDP-N-acetylglucosamine 1-carboxyvinyltransferase | - |
| HMJ40_RS18290 (HMJ40_18305) | 3903253..3903888 | + | 636 | WP_003094331.1 | ATP phosphoribosyltransferase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|