MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 40897 bp
Accession: NZ_CP053346 Location: 676914..717810 Organism: Sphingomonas sp. AP4-R1 Replicon: chromosome
Accession: NZ_CP053346 Location: 676914..717810 Organism: Sphingomonas sp. AP4-R1 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HL653_RS03285 () | 672731..673846 | + | 1116 | WP_171746750.1 | DUF47 family protein | - |
| HL653_RS03290 () | 673856..674857 | + | 1002 | WP_171743250.1 | inorganic phosphate transporter | - |
| HL653_RS03295 () | 675027..676775 | + | 1749 | WP_171743251.1 | single-stranded-DNA-specific exonuclease RecJ | - |
| HL653_RS03305 () | 677086..677432 | - | 347 | Protein_651 | NUDIX domain-containing protein | - |
| HL653_RS03310 () | 677509..677742 | + | 234 | WP_171743252.1 | IS66 family transposase ISRel19 | Transposase |
| HL653_RS03315 () | 677800..678114 | + | 315 | WP_171743253.1 | DUF1153 domain-containing protein | - |
| HL653_RS03320 () | 679258..680451 | - | 1194 | Protein_654 | IS701 family transposase ISNha1 | Transposase |
| HL653_RS03325 () | 680783..681184 | + | 402 | Protein_655 | IS256 family transposase ISSpwi2 | Transposase |
| HL653_RS03330 () | 681258..681635 | + | 378 | WP_171743254.1 | IS481 family transposase ISRel12 | Transposase |
| HL653_RS03335 () | 681990..683330 | - | 1341 | WP_171743255.1 | oligopeptide:H+ symporter | - |
| HL653_RS03340 () | 683360..684538 | - | 1179 | WP_171743256.1 | Xaa-Pro peptidase family protein | - |
| HL653_RS03345 () | 684541..685605 | - | 1065 | WP_171743257.1 | succinylglutamate desuccinylase/aspartoacylase family protein | - |
| HL653_RS03350 () | 685602..686990 | - | 1389 | WP_171743258.1 | aldehyde dehydrogenase family protein | - |
| HL653_RS03355 () | 686994..688382 | - | 1389 | WP_171743259.1 | aminotransferase class III-fold pyridoxal phosphate-dependent enzyme | - |
| HL653_RS03360 () | 688479..688955 | + | 477 | WP_171743260.1 | Lrp/AsnC family transcriptional regulator | - |
| HL653_RS03365 () | 688980..691313 | - | 2334 | WP_171743261.1 | hypothetical protein | - |
| HL653_RS03370 () | 691430..694360 | - | 2931 | WP_171743262.1 | Colicin I receptor | VF |
| HL653_RS03375 () | 694729..695211 | + | 483 | WP_171743263.1 | Lrp/AsnC family transcriptional regulator | - |
| HL653_RS03380 () | 695364..695570 | + | 207 | WP_171746751.1 | DUF2306 domain-containing protein | - |
| HL653_RS03390 () | 697521..697817 | - | 297 | Protein_668 | IS1182 family transposase ISVsp9 | Transposase |
| HL653_RS03395 () | 698595..698951 | + | 357 | Protein_669 | hypothetical protein | - |
| HL653_RS03400 () | 699111..700463 | + | 1353 | WP_171746752.1 | IS1380 family transposase ISSp1 | Transposase |
| HL653_RS03405 () | 700644..701396 | - | 753 | WP_171743265.1 | hypothetical protein | - |
| HL653_RS03410 () | 701414..704428 | - | 3015 | WP_171743266.1 | Ti-type conjugative transfer relaxase TraA | - |
| HL653_RS03415 () | 704602..704859 | + | 258 | WP_171743267.1 | conjugal transfer protein TraD | - |
| HL653_RS03420 () | 704945..705169 | + | 225 | WP_171743268.1 | conjugal transfer protein TraD | - |
| HL653_RS03425 () | 705191..706153 | - | 963 | WP_171743269.1 | nucleotidyltransferase | - |
| HL653_RS03430 () | 706252..707767 | - | 1516 | Protein_676 | HEPN domain-containing protein | - |
| HL653_RS03435 () | 707764..708408 | - | 645 | WP_171743270.1 | hypothetical protein | - |
| HL653_RS03440 () | 708565..708750 | + | 186 | WP_171746753.1 | hypothetical protein | - |
| HL653_RS03445 () | 709119..709907 | + | 789 | WP_171743271.1 | methyltransferase domain-containing protein | - |
| HL653_RS03450 () | 710150..711502 | + | 1353 | WP_171743272.1 | hypothetical protein | - |
| HL653_RS03455 () | 711582..712508 | + | 927 | WP_171743273.1 | phosphotransferase | - |
| HL653_RS03460 () | 712600..713070 | + | 471 | WP_171743274.1 | GFA family protein | - |
| HL653_RS03465 () | 713133..714149 | - | 1017 | WP_171743275.1 | hypothetical protein | - |
| HL653_RS03470 () | 714277..714718 | - | 442 | Protein_684 | GNAT family N-acetyltransferase | - |
| HL653_RS03475 () | 714847..715152 | - | 306 | WP_171743276.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| HL653_RS03480 () | 715149..715454 | - | 306 | WP_171743277.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | Antitoxin Detail |
| HL653_RS03485 () | 716002..716217 | + | 216 | WP_021316615.1 | AlpA family phage regulatory protein | - |
| HL653_RS03490 () | 716214..716408 | + | 195 | WP_171743278.1 | helix-turn-helix domain-containing protein | - |
| HL653_RS03495 () | 716383..717621 | - | 1239 | WP_171746754.1 | Prophage integrase IntS ; Integrase | Integrase |
| HL653_RS03500 () | 718132..719148 | + | 1017 | WP_171743279.1 | zinc-dependent alcohol dehydrogenase family protein | - |
| HL653_RS03505 () | 719259..720089 | + | 831 | WP_171743280.1 | SDR family oxidoreductase | - |
| HL653_RS03510 () | 720211..721236 | + | 1026 | WP_171743281.1 | aldo/keto reductase | - |
| HL653_RS03515 () | 721325..721942 | - | 618 | WP_171743282.1 | cysteine hydrolase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|