MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 50106 bp
Accession: NZ_CP053284 Location: 764646..814751 Organism: Escherichia coli strain SCU-104 Replicon: chromosome
Accession: NZ_CP053284 Location: 764646..814751 Organism: Escherichia coli strain SCU-104 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HHJ22_RS03590 () | 759813..760268 | + | 456 | WP_001087289.1 | type II secretion system major pseudopilin GspG | - |
| HHJ22_RS03595 () | 760272..760835 | + | 564 | WP_001115154.1 | type II secretion system minor pseudopilin GspH | - |
| HHJ22_RS03600 () | 760832..761203 | + | 372 | WP_000820113.1 | type II secretion system minor pseudopilin GspI | - |
| HHJ22_RS03605 () | 761200..761799 | + | 600 | WP_001255034.1 | type II secretion system minor pseudopilin GspJ | - |
| HHJ22_RS03610 () | 761802..762779 | + | 978 | WP_000633209.1 | type II secretion system minor pseudopilin GspK | - |
| HHJ22_RS03615 () | 762776..763954 | + | 1179 | WP_000094991.1 | type II secretion system protein GspL | - |
| HHJ22_RS03620 () | 763956..764492 | + | 537 | WP_000942785.1 | GspM family type II secretion system protein YghD | - |
| HHJ22_RS03625 () | 764773..765342 | - | 570 | WP_001290247.1 | DUF4942 domain-containing protein | - |
| HHJ22_RS03630 () | 765439..765636 | - | 198 | WP_000839281.1 | DUF957 domain-containing protein | - |
| HHJ22_RS03635 () | 765648..766136 | - | 489 | WP_000777547.1 | hypothetical protein | - |
| HHJ22_RS03640 () | 766133..766507 | - | 375 | WP_000854753.1 | TA system toxin CbtA family protein | Toxin Detail |
| HHJ22_RS03645 () | 766597..766965 | - | 369 | WP_001278232.1 | type IV toxin-antitoxin system toxin CbtA | Antitoxin Detail |
| HHJ22_RS03650 () | 767128..767322 | - | 195 | WP_001219880.1 | DUF987 domain-containing protein | - |
| HHJ22_RS03655 () | 767376..767723 | - | 348 | WP_000612591.1 | IS66 family transposase ISEc8 | Transposase |
| HHJ22_RS03660 () | 767720..768100 | - | 381 | WP_001171523.1 | IS66 family transposase ISEc8 | Transposase |
| HHJ22_RS03665 () | 768313..768501 | - | 189 | Protein_719 | IS66 family transposase IS682 | Transposase |
| HHJ22_RS03670 () | 768562..769695 | + | 1134 | WP_016232250.1 | IS110 family transposase ISEc45 | Transposase |
| HHJ22_RS03675 () | 769948..771372 | - | 1425 | Protein_721 | IS66 family transposase IS682 | Transposase |
| HHJ22_RS03680 () | 771403..771753 | - | 351 | WP_087894478.1 | IS66 family transposase IS682 | Transposase |
| HHJ22_RS03685 () | 771750..772175 | - | 426 | WP_000435656.1 | IS66 family transposase IS682 | Transposase |
| HHJ22_RS03690 () | 772321..772719 | - | 399 | Protein_724 | transposase domain-containing protein | - |
| HHJ22_RS03695 () | 772837..773754 | + | 918 | WP_001149832.1 | N-acetylneuraminate lyase | - |
| HHJ22_RS03700 () | 773788..774663 | + | 876 | WP_000629094.1 | N-acetylmannosamine kinase | - |
| HHJ22_RS03705 () | 774712..776184 | + | 1473 | WP_000376547.1 | MFS transporter | - |
| HHJ22_RS03710 () | 776188..777018 | + | 831 | WP_000948500.1 | alpha/beta hydrolase | - |
| HHJ22_RS03715 () | 777064..777774 | + | 711 | WP_001296386.1 | N-acetylneuraminic acid channel protein | - |
| HHJ22_RS03720 () | 777787..778896 | + | 1110 | WP_000865295.1 | N-acetylneuraminate epimerase | - |
| HHJ22_RS03725 () | 778946..779881 | + | 936 | WP_174147630.1 | alpha/beta hydrolase | - |
| HHJ22_RS03730 () | 779917..780651 | - | 735 | WP_001282578.1 | transcriptional regulator NanR | - |
| HHJ22_RS03735 () | 780751..781737 | + | 987 | WP_000274668.1 | hypothetical protein | - |
| HHJ22_RS03740 () | 781895..783088 | - | 1194 | WP_000074477.1 | MFS transporter | - |
| HHJ22_RS03745 () | 783224..784948 | + | 1725 | WP_001403387.1 | N(2)-citryl-N(6)-acetyl-N(6)-hydroxylysine synthase | VF |
| HHJ22_RS03750 () | 784949..785896 | + | 948 | WP_001287503.1 | N(6)-hydroxylysine O-acetyltransferase | VF |
| HHJ22_RS03755 () | 785896..787638 | + | 1743 | WP_001015713.1 | Aerobactin synthase | VF |
| HHJ22_RS03760 () | 787635..788972 | + | 1338 | WP_000750131.1 | L-lysine N6-monooxygenase | VF |
| HHJ22_RS03765 () | 788978..791173 | + | 2196 | WP_001387241.1 | Ferric aerobactin receptor | VF |
| HHJ22_RS03770 () | 791948..792272 | - | 325 | Protein_740 | hypothetical protein | - |
| HHJ22_RS03775 () | 792845..793171 | - | 327 | WP_000477619.1 | hypothetical protein | - |
| HHJ22_RS03780 () | 794624..796714 | + | 2091 | WP_001223350.1 | bifunctional siderophore receptor/adhesin Iha | - |
| HHJ22_RS03785 () | 796932..797091 | - | 160 | Protein_743 | transposase domain-containing protein | - |
| HHJ22_RS03790 () | 797319..798932 | - | 1614 | WP_174147632.1 | IS66 family transposase ISEc43 | Transposase |
| HHJ22_RS03795 () | 798963..799313 | - | 351 | WP_000624723.1 | IS66 family transposase ISEc47 | Transposase |
| HHJ22_RS03800 () | 799310..799735 | - | 426 | WP_000422749.1 | IS66 family transposase ISEc23 | Transposase |
| HHJ22_RS03805 () | 799963..800363 | - | 401 | Protein_747 | IS66 family transposase ISCro1 | Transposase |
| HHJ22_RS03810 () | 800367..800942 | + | 576 | Protein_748 | ISL3 family transposase ISEc38 | Transposase |
| HHJ22_RS03815 () | 800993..801943 | + | 951 | Protein_749 | IS66 family transposase ISCro1 | Transposase |
| HHJ22_RS03820 () | 802346..802927 | - | 582 | WP_168725979.1 | hypothetical protein | - |
| HHJ22_RS03825 () | 802974..806831 | - | 3858 | WP_016232304.1 | Serine protease pet autotransporter | VF |
| HHJ22_RS03830 () | 807192..808196 | - | 1005 | Protein_752 | conjugal transfer protein TraF | - |
| HHJ22_RS03835 () | 808181..808558 | + | 378 | Protein_753 | transposase | - |
| HHJ22_RS03840 () | 808597..808944 | - | 348 | Protein_754 | IS110 family transposase | - |
| HHJ22_RS03845 () | 808990..809160 | - | 171 | Protein_755 | IS3 family transposase | - |
| HHJ22_RS03850 () | 809302..812817 | - | 3516 | WP_174147634.1 | ATP-binding protein | - |
| HHJ22_RS03855 () | 813269..814531 | - | 1263 | WP_001218834.1 | Prophage integrase IntS ; Integrase | Integrase |
| HHJ22_RS03865 () | 814910..815617 | - | 708 | WP_000234514.1 | DUF554 domain-containing protein | - |
| HHJ22_RS03870 () | 816015..818150 | + | 2136 | WP_001326492.1 | ornithine decarboxylase | - |
| HHJ22_RS03875 () | 818200..819456 | - | 1257 | WP_001049791.1 | nucleoside permease NupG | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|