MGE detailed information
MGE type: Genomic_island MGE length: 67381 bp
Accession: NZ_CP053284 Location: 4063643..4131023 Organism: Escherichia coli strain SCU-104 Replicon: chromosome
Accession: NZ_CP053284 Location: 4063643..4131023 Organism: Escherichia coli strain SCU-104 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HHJ22_RS19780 () | 4059191..4059886 | - | 696 | WP_000370307.1 | lactate utilization protein C | - |
| HHJ22_RS19785 () | 4059879..4061306 | - | 1428 | WP_000023927.1 | iron-sulfur cluster-binding protein | - |
| HHJ22_RS19790 () | 4061317..4062036 | - | 720 | WP_001102108.1 | (Fe-S)-binding protein | - |
| HHJ22_RS19795 () | 4062563..4063417 | - | 855 | WP_000339594.1 | DNA-binding transcriptional regulator RclR | - |
| HHJ22_RS19800 () | 4063643..4064968 | + | 1326 | WP_001046307.1 | pyridine nucleotide-disulfide oxidoreductase | - |
| HHJ22_RS19805 () | 4065077..4065313 | + | 237 | WP_000474084.1 | DUF1471 domain-containing protein | - |
| HHJ22_RS19810 () | 4065325..4065918 | + | 594 | WP_001299021.1 | reactive chlorine species resistance protein RclC | - |
| HHJ22_RS19815 () | 4066077..4066205 | - | 129 | Protein_3886 | aldo/keto reductase | - |
| HHJ22_RS19820 () | 4066508..4067359 | + | 852 | WP_016232027.1 | Right origin-binding protein | VF |
| HHJ22_RS19825 () | 4067499..4071755 | - | 4257 | WP_168725953.1 | Invasin | VF |
| HHJ22_RS19830 () | 4072870..4072971 | + | 102 | WP_000662258.1 | hypothetical protein | - |
| HHJ22_RS19835 () | 4073335..4073598 | + | 264 | WP_000803998.1 | type B 50S ribosomal protein L31 | - |
| HHJ22_RS19840 () | 4073598..4073738 | + | 141 | WP_000866436.1 | type B 50S ribosomal protein L36 | - |
| HHJ22_RS19845 () | 4073773..4074000 | - | 228 | WP_001147279.1 | hypothetical protein | - |
| HHJ22_RS19850 () | 4074824..4075366 | + | 543 | WP_143369778.1 | HTH-type transcriptional regulator EcpR | VF |
| HHJ22_RS19855 () | 4075441..4076028 | + | 588 | WP_000730972.1 | Common pilus major fimbrillin subunit EcpA | VF |
| HHJ22_RS19860 () | 4076231..4077343 | - | 1113 | WP_001300563.1 | IS4 family transposase IS421 | Transposase |
| HHJ22_RS19865 () | 4077435..4078103 | + | 669 | WP_000716398.1 | putative fimbrial chaperone EcpB | VF |
| HHJ22_RS19870 () | 4078129..4080654 | + | 2526 | Protein_3897 | putative outer membrane usher protein EcpC | VF |
| HHJ22_RS19875 () | 4080644..4082287 | + | 1644 | WP_001310578.1 | Fimbria adhesin EcpD | VF |
| HHJ22_RS19880 () | 4082256..4082966 | + | 711 | WP_001350485.1 | putative fimbrial chaperone EcpE | VF |
| HHJ22_RS19885 () | 4083279..4083608 | + | 330 | WP_001303809.1 | YkgJ family cysteine cluster protein | - |
| HHJ22_RS19890 () | 4083856..4084470 | - | 615 | WP_001019920.1 | YagU family protein | - |
| HHJ22_RS19895 () | 4084888..4085577 | + | 690 | WP_000070700.1 | aldehyde dehydrogenase iron-sulfur subunit | - |
| HHJ22_RS19900 () | 4085574..4086530 | + | 957 | WP_000643333.1 | aldehyde oxidoreductase FAD-binding subunit PaoB | - |
| HHJ22_RS19905 () | 4086527..4088725 | + | 2199 | WP_168725920.1 | aldehyde oxidoreductase molybdenum-binding subunit PaoC | - |
| HHJ22_RS19910 () | 4088735..4089691 | + | 957 | WP_106704961.1 | molybdenum cofactor insertion chaperone PaoD | - |
| HHJ22_RS19915 () | 4089670..4090080 | + | 411 | WP_001111348.1 | hypothetical protein | - |
| HHJ22_RS19920 () | 4090906..4091505 | - | 600 | WP_016262943.1 | hypothetical protein | - |
| HHJ22_RS19925 () | 4091505..4092398 | - | 894 | WP_016262942.1 | DUF4747 family protein | - |
| HHJ22_RS19930 () | 4092731..4092910 | - | 180 | WP_016262941.1 | hypothetical protein | - |
| HHJ22_RS19935 () | 4092960..4093541 | - | 582 | WP_016262940.1 | hypothetical protein | - |
| HHJ22_RS19940 () | 4093930..4094454 | - | 525 | WP_016262939.1 | helix-turn-helix domain-containing protein | - |
| HHJ22_RS19945 () | 4094554..4094826 | - | 273 | WP_001723130.1 | hypothetical protein | - |
| HHJ22_RS19950 () | 4094823..4094990 | - | 168 | WP_016262938.1 | hypothetical protein | - |
| HHJ22_RS19955 () | 4095006..4095206 | + | 201 | WP_024214657.1 | hypothetical protein | - |
| HHJ22_RS19960 () | 4095269..4095592 | - | 324 | WP_016262937.1 | hypothetical protein | - |
| HHJ22_RS19965 () | 4095657..4096799 | - | 1143 | WP_016262936.1 | hypothetical protein | - |
| HHJ22_RS19970 () | 4096934..4097221 | - | 288 | WP_016262934.1 | PerC family transcriptional regulator | - |
| HHJ22_RS19975 () | 4097218..4097748 | - | 531 | WP_024214656.1 | ProQ/FinO family protein | - |
| HHJ22_RS19980 () | 4098129..4099934 | - | 1806 | WP_174147778.1 | DNA primase | - |
| HHJ22_RS19985 () | 4099931..4100221 | - | 291 | WP_016262931.1 | DUF4222 domain-containing protein | - |
| HHJ22_RS19990 () | 4100226..4100426 | - | 201 | WP_000551489.1 | hypothetical protein | - |
| HHJ22_RS19995 () | 4100419..4100652 | - | 234 | WP_016262930.1 | hypothetical protein | - |
| HHJ22_RS20000 () | 4100645..4101010 | - | 366 | WP_016262929.1 | hypothetical protein | - |
| HHJ22_RS20005 () | 4101003..4101227 | - | 225 | WP_016262928.1 | hypothetical protein | - |
| HHJ22_RS20010 () | 4101220..4101375 | - | 156 | Protein_3925 | host cell division inhibitor Icd-like protein | - |
| HHJ22_RS20015 () | 4102384..4102764 | - | 381 | Protein_3926 | host cell division inhibitor Icd-like protein | - |
| HHJ22_RS20020 () | 4102769..4103617 | - | 849 | Protein_3927 | antA/AntB antirepressor family protein | - |
| HHJ22_RS20025 () | 4103695..4103892 | - | 198 | WP_004027535.1 | AlpA family transcriptional regulator | - |
| HHJ22_RS20030 () | 4104007..4104762 | - | 756 | WP_016262924.1 | hypothetical protein | - |
| HHJ22_RS20035 () | 4104891..4106105 | - | 1215 | WP_000772650.1 | Prophage integrase IntS ; Integrase | Integrase |
| HHJ22_RS20045 () | 4106462..4107715 | - | 1254 | WP_000893278.1 | glutamate-5-semialdehyde dehydrogenase | - |
| HHJ22_RS20050 () | 4107727..4108830 | - | 1104 | WP_001285288.1 | glutamate 5-kinase | - |
| HHJ22_RS20055 () | 4109118..4110173 | + | 1056 | WP_000749863.1 | phosphoporin PhoE | - |
| HHJ22_RS20060 () | 4110212..4110613 | - | 402 | WP_000174677.1 | sigma factor-binding protein Crl | - |
| HHJ22_RS20065 () | 4110671..4111915 | - | 1245 | WP_000189532.1 | esterase FrsA | - |
| - () | 4111331..4111411 | - | 81 | NuclAT_12 | - | - |
| - () | 4111331..4111411 | - | 81 | NuclAT_12 | - | - |
| - () | 4111331..4111411 | - | 81 | NuclAT_12 | - | - |
| - () | 4111331..4111411 | - | 81 | NuclAT_12 | - | - |
| HHJ22_RS20070 () | 4112007..4112465 | - | 459 | WP_001291990.1 | xanthine phosphoribosyltransferase | - |
| HHJ22_RS20075 () | 4112726..4114183 | + | 1458 | WP_001292994.1 | cytosol nonspecific dipeptidase | - |
| HHJ22_RS20080 () | 4114240..4114797 | - | 558 | WP_001352051.1 | peptide chain release factor H | - |
| HHJ22_RS20085 () | 4114709..4114975 | - | 267 | WP_001295202.1 | hypothetical protein | - |
| HHJ22_RS20090 () | 4115281..4115733 | - | 453 | WP_001059892.1 | GNAT family N-acetyltransferase | - |
| HHJ22_RS20095 () | 4115743..4116141 | - | 399 | WP_001263489.1 | type II toxin-antitoxin system mRNA interferase toxin YafO | Toxin Detail |
| HHJ22_RS20100 () | 4116144..4116437 | - | 294 | WP_000554758.1 | type I toxin-antitoxin system antitoxin YafN | Antitoxin Detail |
| HHJ22_RS20105 () | 4116489..4117544 | - | 1056 | WP_001226164.1 | DNA polymerase IV | - |
| HHJ22_RS20110 () | 4117615..4118400 | - | 786 | WP_000207552.1 | Chemotaxis protein LafU | VF |
| HHJ22_RS20115 () | 4118345..4120084 | + | 1740 | WP_001334802.1 | Flagellar biosynthesis protein FlhA | VF |
| HHJ22_RS20120 () | 4120308..4120805 | - | 498 | WP_000006255.1 | REP-associated tyrosine transposase RayT | - |
| HHJ22_RS20125 () | 4120981..4121730 | - | 750 | WP_000056849.1 | Murein DD-endopeptidase MepH | VF |
| HHJ22_RS20130 () | 4121940..4122200 | + | 261 | WP_000729703.1 | type II toxin-antitoxin system antitoxin DinJ | Antitoxin Detail |
| HHJ22_RS20135 () | 4122203..4122481 | + | 279 | WP_000615983.1 | type II toxin-antitoxin system mRNA interferase toxin YafQ | Toxin Detail |
| HHJ22_RS20140 () | 4122637..4123377 | + | 741 | WP_001225679.1 | murein L,D-transpeptidase | - |
| HHJ22_RS20145 () | 4123348..4124115 | - | 768 | WP_000333380.1 | class II glutamine amidotransferase | - |
| HHJ22_RS20150 () | 4124321..4124899 | - | 579 | WP_000284050.1 | Phosphoheptose isomerase | VF |
| HHJ22_RS20155 () | 4125139..4127583 | + | 2445 | WP_000973083.1 | Acyl-coenzyme A dehydrogenase | VF |
| HHJ22_RS20160 () | 4127626..4128099 | - | 474 | WP_000532698.1 | Ivy family C-type lysozyme inhibitor | - |
| HHJ22_RS20165 () | 4128253..4129023 | + | 771 | WP_001118036.1 | 2-oxoglutaramate amidase | - |
| HHJ22_RS20170 () | 4129064..4130200 | - | 1137 | WP_000420818.1 | ISAs1 family transposase ISEc1 | Transposase |
| HHJ22_RS20175 () | 4130631..4131023 | - | 393 | WP_001101839.1 | hypothetical protein | - |
| HHJ22_RS20180 () | 4131001..4135245 | - | 4245 | WP_097748248.1 | RHS repeat protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|