MGE detailed information
MGE type: Genomic_island MGE length: 18555 bp
Accession: NZ_CP053284 Location: 2638830..2657384 Organism: Escherichia coli strain SCU-104 Replicon: chromosome
Accession: NZ_CP053284 Location: 2638830..2657384 Organism: Escherichia coli strain SCU-104 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HHJ22_RS12785 () | 2633848..2634063 | - | 216 | WP_024194161.1 | class II holin family protein | - |
| HHJ22_RS12790 () | 2634140..2634430 | - | 291 | WP_096980659.1 | DUF826 domain-containing protein | - |
| HHJ22_RS12795 () | 2634456..2634650 | - | 195 | WP_024192660.1 | DUF1378 family protein | - |
| HHJ22_RS12800 () | 2634792..2636765 | - | 1974 | WP_000874521.1 | SASA family carbohydrate esterase | - |
| HHJ22_RS12805 () | 2638216..2638830 | - | 615 | WP_001241329.1 | hypothetical protein | - |
| HHJ22_RS12810 () | 2639065..2639265 | - | 201 | WP_000994506.1 | protein ninH | - |
| HHJ22_RS12815 () | 2639262..2639624 | - | 363 | WP_001624518.1 | RusA family crossover junction endodeoxyribonuclease | - |
| HHJ22_RS12820 () | 2639621..2639911 | - | 291 | WP_024194163.1 | DUF1364 domain-containing protein | - |
| HHJ22_RS12825 () | 2639935..2640126 | - | 192 | WP_001254269.1 | NinE family protein | - |
| HHJ22_RS12830 () | 2640123..2640533 | - | 411 | WP_001076830.1 | recombination protein NinB | - |
| HHJ22_RS12835 () | 2640588..2641262 | - | 675 | WP_021571289.1 | ORF6N domain-containing protein | - |
| HHJ22_RS12840 () | 2641580..2641909 | + | 330 | WP_016232083.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| HHJ22_RS12845 () | 2641899..2642207 | + | 309 | WP_000147082.1 | helix-turn-helix transcriptional regulator | Antitoxin Detail |
| HHJ22_RS12850 () | 2642262..2642507 | - | 246 | WP_001624507.1 | hypothetical protein | - |
| HHJ22_RS12855 () | 2642506..2643180 | + | 675 | WP_032144013.1 | DUF4145 domain-containing protein | - |
| HHJ22_RS12860 () | 2643213..2643644 | - | 432 | WP_000196185.1 | DUF977 family protein | - |
| HHJ22_RS12865 () | 2643660..2644431 | - | 772 | Protein_2525 | DUF1627 domain-containing protein | - |
| HHJ22_RS12870 () | 2644457..2645197 | - | 741 | WP_021571292.1 | ATP-binding protein | - |
| HHJ22_RS12875 () | 2645204..2646292 | - | 1089 | WP_168725754.1 | DNA-binding protein | - |
| HHJ22_RS12880 () | 2646313..2646531 | - | 219 | WP_000438870.1 | hypothetical protein | - |
| HHJ22_RS12885 () | 2646546..2646842 | - | 297 | WP_000084293.1 | hypothetical protein | - |
| HHJ22_RS12890 () | 2646959..2647183 | - | 225 | WP_001054988.1 | helix-turn-helix domain-containing protein | - |
| HHJ22_RS12895 () | 2647294..2648001 | + | 708 | WP_001369130.1 | helix-turn-helix transcriptional regulator | - |
| HHJ22_RS12900 () | 2648154..2648375 | - | 222 | WP_000502040.1 | hypothetical protein | - |
| HHJ22_RS12905 () | 2648709..2649014 | + | 306 | WP_000256291.1 | hypothetical protein | - |
| HHJ22_RS12910 () | 2649225..2649410 | + | 186 | WP_001140061.1 | hypothetical protein | - |
| HHJ22_RS12915 () | 2649442..2649801 | + | 360 | WP_001005964.1 | hypothetical protein | - |
| HHJ22_RS12920 () | 2649770..2649979 | - | 210 | WP_000189938.1 | hypothetical protein | - |
| HHJ22_RS12925 () | 2650436..2650657 | + | 222 | WP_000560214.1 | cell division protein FtsZ | - |
| HHJ22_RS12930 () | 2650741..2651127 | + | 387 | WP_016238038.1 | hypothetical protein | - |
| HHJ22_RS12935 () | 2651235..2653307 | + | 2073 | WP_021571294.1 | hypothetical protein | - |
| HHJ22_RS12940 () | 2653304..2653600 | + | 297 | WP_000995032.1 | host-nuclease inhibitor Gam family protein | - |
| HHJ22_RS12945 () | 2653606..2654391 | + | 786 | WP_000100829.1 | phage recombination protein Bet | - |
| HHJ22_RS12950 () | 2654388..2655068 | + | 681 | WP_021571295.1 | YqaJ viral recombinase family protein | - |
| HHJ22_RS12955 () | 2655116..2655367 | + | 252 | WP_000497817.1 | DUF4222 domain-containing protein | - |
| HHJ22_RS12960 () | 2655629..2656792 | + | 1164 | WP_001387389.1 | Putative defective protein IntQ ; Integrase | Integrase |
| HHJ22_RS12965 () | 2656842..2657384 | + | 543 | Protein_2545 | dimethylsulfoxide reductase subunit B | - |
| HHJ22_RS12970 () | 2657386..2658240 | + | 855 | WP_000526503.1 | dimethyl sulfoxide reductase anchor subunit | - |
| HHJ22_RS12975 () | 2658283..2658897 | + | 615 | WP_000148710.1 | Tat proofreading chaperone DmsD | - |
| HHJ22_RS12980 () | 2659057..2660349 | + | 1293 | WP_001315626.1 | voltage-gated ClC-type chloride channel ClcB | - |
| HHJ22_RS12985 () | 2660302..2660997 | - | 696 | WP_000919231.1 | dethiobiotin synthase | - |
| HHJ22_RS12990 () | 2661122..2662342 | - | 1221 | WP_000225262.1 | DNA-binding transcriptional repressor Mlc | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|