MGE detailed information
MGE type: Prophage MGE length: 47444 bp
Accession: NZ_CP053284 Location: 2289613..2337056 Organism: Escherichia coli strain SCU-104 Replicon: chromosome
Accession: NZ_CP053284 Location: 2289613..2337056 Organism: Escherichia coli strain SCU-104 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HHJ22_RS11075 () | 2285663..2286646 | + | 984 | WP_000387388.1 | zinc transporter ZntB | - |
| HHJ22_RS11080 () | 2287124..2288497 | + | 1374 | WP_000123737.1 | ATP-dependent RNA helicase DbpA | - |
| HHJ22_RS11085 () | 2288626..2289561 | - | 936 | WP_001157406.1 | tRNA 2-thiocytidine(32) synthetase TtcA | - |
| HHJ22_RS11090 () | 2289613..2290847 | - | 1235 | Protein_2170 | Putative defective protein IntQ ; Integrase | Integrase |
| HHJ22_RS11095 () | 2290849..2291064 | - | 216 | WP_000079604.1 | excisionase XisR | - |
| HHJ22_RS11100 () | 2291143..2291352 | - | 210 | WP_000276809.1 | double-strand break reduction protein RcbA | - |
| - () | 2291168..2291346 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - () | 2291168..2291346 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - () | 2291168..2291346 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - () | 2291168..2291346 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| HHJ22_RS11105 () | 2291345..2291539 | - | 195 | WP_001317028.1 | type I toxin-antitoxin system endodeoxyribonuclease toxin RalR | Toxin Detail |
| HHJ22_RS11110 () | 2291595..2292404 | - | 810 | WP_000166319.1 | recombination protein RecT | - |
| HHJ22_RS11115 () | 2292397..2294997 | - | 2601 | Protein_2175 | exodeoxyribonuclease VIII | - |
| HHJ22_RS11120 () | 2295099..2295374 | - | 276 | WP_000632297.1 | protein RacC | - |
| HHJ22_RS11125 () | 2295449..2295619 | - | 171 | WP_016232653.1 | phage protein | - |
| HHJ22_RS11130 () | 2295619..2295840 | - | 222 | WP_000560223.1 | killing protein KilR | - |
| HHJ22_RS11135 () | 2296282..2296770 | + | 489 | WP_001312793.1 | superinfection exclusion protein B | - |
| HHJ22_RS11140 () | 2296767..2296922 | - | 156 | WP_016232654.1 | DUF1391 family protein | - |
| HHJ22_RS11145 () | 2297376..2297852 | - | 477 | WP_000948459.1 | DNA-binding transcriptional repressor RacR | - |
| HHJ22_RS11150 () | 2297976..2298272 | + | 297 | WP_000712069.1 | toxin YdaS | - |
| HHJ22_RS11155 () | 2298295..2298717 | + | 423 | WP_000693797.1 | phage protein | - |
| HHJ22_RS11160 () | 2298730..2299587 | + | 858 | WP_016232655.1 | DUF1376 domain-containing protein | - |
| HHJ22_RS11165 () | 2299594..2300340 | + | 747 | Protein_2185 | IS21 family transposase ISCsa9 | Transposase |
| HHJ22_RS11170 () | 2300363..2301124 | + | 762 | WP_000450660.1 | DUF1627 domain-containing protein | - |
| HHJ22_RS11175 () | 2301140..2301571 | + | 432 | WP_001403739.1 | DUF977 family protein | - |
| HHJ22_RS11180 () | 2301765..2302919 | + | 1155 | WP_000385105.1 | ATP-binding protein | - |
| HHJ22_RS11185 () | 2302894..2305158 | + | 2265 | WP_016232657.1 | S8 family peptidase | - |
| HHJ22_RS11190 () | 2305575..2306174 | + | 600 | WP_087893974.1 | DUF1367 family protein | - |
| HHJ22_RS11195 () | 2306174..2306464 | + | 291 | WP_000247763.1 | DUF1364 domain-containing protein | - |
| HHJ22_RS11200 () | 2306461..2307003 | + | 543 | WP_000640161.1 | DUF1133 family protein | - |
| HHJ22_RS11205 () | 2308048..2308476 | + | 429 | WP_000506936.1 | cell envelope integrity protein TolA | - |
| HHJ22_RS11210 () | 2308648..2309022 | + | 375 | WP_001348108.1 | hypothetical protein | - |
| HHJ22_RS11215 () | 2309274..2309489 | + | 216 | WP_072971597.1 | class II holin family protein | - |
| HHJ22_RS11220 () | 2309489..2309986 | + | 498 | WP_001135310.1 | lysozyme RrrD | - |
| HHJ22_RS11225 () | 2310203..2310388 | + | 186 | WP_001228696.1 | prophage lysis lipoprotein RzoD | - |
| HHJ22_RS11230 () | 2310585..2312042 | + | 1458 | WP_001097895.1 | Trk system potassium transporter TrkG | - |
| HHJ22_RS11235 () | 2312180..2312971 | + | 792 | WP_016232661.1 | ParB/Srx family N-terminal domain-containing protein | - |
| HHJ22_RS11240 () | 2312964..2313896 | + | 933 | Protein_2200 | hypothetical protein | - |
| HHJ22_RS11245 () | 2313832..2314083 | + | 252 | WP_000613571.1 | hypothetical protein | - |
| HHJ22_RS11250 () | 2314087..2315181 | + | 1095 | WP_000089447.1 | terminase small subunit | - |
| HHJ22_RS11255 () | 2315162..2316463 | + | 1302 | WP_000625348.1 | terminase family protein | - |
| HHJ22_RS11260 () | 2316466..2317872 | + | 1407 | WP_000763702.1 | DUF4055 domain-containing protein | - |
| HHJ22_RS11265 () | 2317856..2318968 | + | 1113 | WP_001363932.1 | hypothetical protein | - |
| HHJ22_RS11270 () | 2319073..2319837 | + | 765 | WP_000770042.1 | hypothetical protein | - |
| HHJ22_RS11275 () | 2319936..2321075 | + | 1140 | WP_000918487.1 | hypothetical protein | - |
| HHJ22_RS11280 () | 2321118..2321294 | + | 177 | WP_000908084.1 | hypothetical protein | - |
| HHJ22_RS11285 () | 2321298..2321693 | + | 396 | Protein_2209 | protein singed | - |
| HHJ22_RS11290 () | 2321693..2322076 | + | 384 | WP_000524260.1 | hypothetical protein | - |
| HHJ22_RS11295 () | 2322077..2322457 | + | 381 | WP_001029819.1 | hypothetical protein | - |
| HHJ22_RS11300 () | 2322454..2322846 | + | 393 | WP_016232664.1 | hypothetical protein | - |
| HHJ22_RS11305 () | 2322873..2323835 | + | 963 | WP_016232665.1 | hypothetical protein | - |
| HHJ22_RS11310 () | 2323986..2324345 | + | 360 | WP_122452218.1 | hypothetical protein | - |
| HHJ22_RS11315 () | 2324453..2324653 | + | 201 | WP_001755909.1 | hypothetical protein | - |
| HHJ22_RS11320 () | 2324819..2328052 | + | 3234 | WP_033866456.1 | phage tail tape measure protein | - |
| HHJ22_RS11325 () | 2328045..2328383 | + | 339 | WP_000024051.1 | phage tail protein | - |
| HHJ22_RS11330 () | 2328383..2329081 | + | 699 | WP_114424623.1 | phage minor tail protein L | - |
| HHJ22_RS11335 () | 2329087..2329830 | + | 744 | WP_136764998.1 | C40 family peptidase | - |
| HHJ22_RS11340 () | 2329767..2330369 | + | 603 | WP_052920620.1 | tail assembly protein | - |
| HHJ22_RS11345 () | 2330429..2333842 | + | 3414 | WP_174147706.1 | host specificity protein J | - |
| HHJ22_RS11350 () | 2333912..2334511 | + | 600 | WP_001230279.1 | Outer membrane protein X | VF |
| HHJ22_RS11355 () | 2334576..2337029 | + | 2454 | Protein_2223 | prophage tail fiber N-terminal domain-containing protein | - |
| HHJ22_RS11360 () | 2337032..2337118 | + | 87 | Protein_2224 | tail fiber assembly protein | - |
| HHJ22_RS11365 () | 2337331..2338188 | - | 858 | WP_000968131.1 | iron/manganese ABC transporter permease subunit SitD | - |
| HHJ22_RS11370 () | 2338185..2339042 | - | 858 | WP_001101728.1 | iron/manganese ABC transporter permease subunit SitC | - |
| HHJ22_RS11375 () | 2339039..2339866 | - | 828 | WP_000983721.1 | iron/manganese ABC transporter ATP-binding protein SitB | - |
| HHJ22_RS11380 () | 2339866..2340780 | - | 915 | WP_000286867.1 | iron/manganese ABC transporter substrate-binding protein SitA | - |
| HHJ22_RS11385 () | 2341366..2341790 | - | 425 | Protein_2229 | universal stress protein UspF | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|