MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 132162 bp
Accession: NZ_CP053281 Location: 718465..850626 Organism: Escherichia coli strain SCU-308 Replicon: chromosome
Accession: NZ_CP053281 Location: 718465..850626 Organism: Escherichia coli strain SCU-308 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HHJ45_RS03510 () | 714147..714728 | + | 582 | WP_000105733.1 | esterase YqiA | - |
| HHJ45_RS03515 () | 714757..716649 | + | 1893 | WP_000195296.1 | DNA topoisomerase IV subunit B | - |
| HHJ45_RS03520 () | 716694..717563 | - | 870 | WP_001060171.1 | DUF2608 domain-containing protein | - |
| HHJ45_RS03525 () | 717577..718272 | - | 696 | WP_000947444.1 | porin | - |
| HHJ45_RS03530 () | 718407..719530 | - | 1124 | Protein_691 | esterase-like activity of phytase family protein | - |
| HHJ45_RS03535 () | 719560..720474 | - | 915 | WP_000712977.1 | carbohydrate kinase family protein | - |
| HHJ45_RS03540 () | 720479..721477 | - | 999 | WP_001315863.1 | SIS domain-containing protein | - |
| HHJ45_RS03545 () | 721477..722553 | - | 1077 | WP_001033125.1 | ADP-ribosylglycohydrolase family protein | - |
| HHJ45_RS03550 () | 722567..723319 | - | 753 | WP_000619461.1 | GntR family transcriptional regulator | - |
| HHJ45_RS03555 () | 723606..724937 | + | 1332 | WP_000778880.1 | MFS transporter | - |
| HHJ45_RS03560 () | 724981..725295 | - | 315 | WP_000958598.1 | antibiotic biosynthesis monooxygenase | - |
| HHJ45_RS03565 () | 725326..725907 | - | 582 | WP_000065440.1 | NADPH:quinone oxidoreductase MdaB | - |
| HHJ45_RS03570 () | 726227..726559 | + | 333 | WP_000912123.1 | DUF2645 family protein | - |
| HHJ45_RS03575 () | 726605..727954 | - | 1350 | WP_000673354.1 | two-component system sensor histidine kinase QseC | - |
| HHJ45_RS03580 () | 727951..728610 | - | 660 | WP_001221502.1 | Transcriptional regulatory protein QseB | VF |
| HHJ45_RS03585 () | 728762..729154 | + | 393 | WP_000712658.1 | OB fold stress tolerance protein YgiW | - |
| HHJ45_RS03590 () | 729207..729689 | + | 483 | WP_000183494.1 | transcriptional regulator | - |
| HHJ45_RS03595 () | 730235..732493 | + | 2259 | WP_001281881.1 | DNA topoisomerase IV subunit A | - |
| HHJ45_RS03600 () | 732726..733463 | + | 738 | WP_000965712.1 | 1-acylglycerol-3-phosphate O-acyltransferase | - |
| HHJ45_RS03605 () | 733538..734950 | + | 1413 | WP_000059395.1 | cell division protein FtsP | - |
| HHJ45_RS03610 () | 735061..737280 | + | 2220 | WP_000095187.1 | YgiQ family radical SAM protein | - |
| HHJ45_RS03615 () | 737323..737580 | - | 258 | WP_000848528.1 | lipoprotein YqhH | - |
| HHJ45_RS03620 () | 737631..738557 | - | 927 | WP_000691598.1 | YbjP/YqhG family protein | - |
| HHJ45_RS03625 () | 738757..739584 | - | 828 | WP_000013149.1 | 2,5-didehydrogluconate reductase DkgA | - |
| HHJ45_RS03630 () | 739689..740852 | - | 1164 | WP_001058813.1 | alcohol dehydrogenase | - |
| HHJ45_RS03635 () | 740989..741945 | + | 957 | WP_001295518.1 | DNA-binding transcriptional regulator YqhC | - |
| HHJ45_RS03640 () | 741985..742644 | - | 660 | WP_000268419.1 | DedA family protein | - |
| HHJ45_RS03645 () | 742784..743971 | - | 1188 | WP_001315867.1 | cystathionine beta-lyase | - |
| HHJ45_RS03650 () | 744223..744957 | + | 735 | WP_000527844.1 | tol-pal system-associated acyl-CoA thioesterase | - |
| HHJ45_RS03655 () | 744964..745389 | + | 426 | WP_001240712.1 | TonB system transport protein ExbD | - |
| HHJ45_RS03660 () | 745661..746545 | - | 885 | WP_000018760.1 | putative oxidoreductase YghA | VF |
| HHJ45_RS03665 () | 746736..747230 | + | 495 | WP_000439331.1 | TIGR00645 family protein | - |
| HHJ45_RS03670 () | 747270..748310 | - | 1041 | WP_000262156.1 | L-glyceraldehyde 3-phosphate reductase | - |
| HHJ45_RS03675 () | 748467..749354 | + | 888 | WP_001297303.1 | dienelactone hydrolase family protein | - |
| HHJ45_RS03680 () | 749473..749760 | + | 288 | WP_001059136.1 | DUF2623 domain-containing protein | - |
| HHJ45_RS03685 () | 749949..751067 | + | 1119 | WP_000145410.1 | hydrogenase 2 small subunit | - |
| HHJ45_RS03690 () | 751070..752056 | + | 987 | WP_001081870.1 | hydrogenase 2 operon protein HybA | - |
| HHJ45_RS03695 () | 752046..753224 | + | 1179 | WP_000017703.1 | Ni/Fe-hydrogenase cytochrome b subunit | - |
| HHJ45_RS03700 () | 753221..754924 | + | 1704 | WP_000083065.1 | hydrogenase 2 large subunit | - |
| HHJ45_RS03705 () | 754924..755418 | + | 495 | WP_001221953.1 | HyaD/HybD family hydrogenase maturation endopeptidase | - |
| HHJ45_RS03710 () | 755411..755899 | + | 489 | WP_000134014.1 | hydrogenase-2 assembly chaperone | - |
| HHJ45_RS03715 () | 755892..756233 | + | 342 | WP_000544952.1 | hydrogenase maturation nickel metallochaperone HypA | - |
| HHJ45_RS03720 () | 756246..756494 | + | 249 | WP_000334896.1 | hydrogenase maturation factor HybG | - |
| HHJ45_RS03725 () | 756616..757596 | - | 981 | WP_000399648.1 | IS110 family transposase IS621 | Transposase |
| HHJ45_RS03730 () | 757896..758762 | - | 867 | WP_001298746.1 | glutathione-dependent disulfide-bond oxidoreductase | - |
| HHJ45_RS03735 () | 758967..760826 | + | 1860 | WP_001297309.1 | bifunctional glutathionylspermidine amidase/synthase | - |
| HHJ45_RS03740 () | 761117..762616 | + | 1500 | WP_000933279.1 | inorganic phosphate transporter PitB | - |
| HHJ45_RS03745 () | 762665..763357 | - | 693 | WP_001190773.1 | thymidylate kinase | - |
| HHJ45_RS03750 () | 763531..764244 | + | 714 | WP_001076237.1 | thymidylate kinase | - |
| HHJ45_RS03755 () | 764276..765034 | + | 759 | WP_000339532.1 | hypothetical protein | - |
| HHJ45_RS03760 () | 765080..766429 | + | 1350 | WP_000896880.1 | lipopolysaccharide biosynthesis protein | - |
| HHJ45_RS03765 () | 766429..767253 | + | 825 | WP_000984977.1 | hypothetical protein | - |
| HHJ45_RS03770 () | 767265..767825 | + | 561 | WP_001315848.1 | YtfJ family protein | - |
| HHJ45_RS03775 () | 767856..768926 | + | 1071 | WP_000779644.1 | LPS export ABC transporter permease LptF | - |
| HHJ45_RS03780 () | 768923..770002 | + | 1080 | WP_001298753.1 | LPS export ABC transporter permease LptG | - |
| HHJ45_RS03785 () | 770037..771209 | - | 1173 | WP_000524972.1 | 8-amino-7-oxononanoate synthase | VF |
| HHJ45_RS03790 () | 771209..771457 | - | 249 | WP_000248097.1 | acyl carrier protein | - |
| HHJ45_RS03795 () | 771489..772403 | - | 915 | WP_001077177.1 | NAD-dependent epimerase/dehydratase family protein | - |
| HHJ45_RS03800 () | 772400..774130 | - | 1731 | WP_000262942.1 | 4-hydroxyphenylalkanoate adenylyltransferase | VF |
| HHJ45_RS03805 () | 774495..775637 | + | 1143 | WP_000388786.1 | DNA-binding protein | - |
| HHJ45_RS03810 () | 775644..776408 | - | 765 | WP_001297764.1 | transcriptional regulator GlcC | - |
| HHJ45_RS03815 () | 776659..778158 | + | 1500 | WP_000026117.1 | glycolate oxidase subunit GlcD | - |
| HHJ45_RS03820 () | 778158..779210 | + | 1053 | WP_000943059.1 | glycolate oxidase subunit GlcE | - |
| HHJ45_RS03825 () | 779221..780444 | + | 1224 | WP_001194682.1 | glycolate oxidase subunit GlcF | - |
| HHJ45_RS03830 () | 780449..780853 | + | 405 | WP_021548861.1 | heme-binding protein | - |
| HHJ45_RS03835 () | 780875..783046 | + | 2172 | WP_000084053.1 | malate synthase G | - |
| HHJ45_RS03840 () | 783402..785084 | + | 1683 | WP_000259303.1 | glycolate permease GlcA | - |
| HHJ45_RS03845 () | 785568..790136 | + | 4569 | WP_001034504.1 | hypothetical protein | VF |
| HHJ45_RS03850 () | 790276..791085 | + | 810 | WP_001317326.1 | Leader peptidase PppA | VF |
| HHJ45_RS03855 () | 791151..791561 | + | 411 | WP_001349452.1 | type II secretion system pilot lipoprotein GspS-beta | - |
| HHJ45_RS03860 () | 791579..792538 | + | 960 | WP_001317325.1 | Type II secretion system protein C | VF |
| HHJ45_RS03865 () | 792568..794628 | + | 2061 | WP_000498824.1 | Type II secretion system protein D | VF |
| HHJ45_RS03870 () | 794628..796121 | + | 1494 | WP_000249368.1 | Type II secretion system protein E | VF |
| HHJ45_RS03875 () | 796121..797344 | + | 1224 | WP_001173448.1 | Type II secretion system protein F | VF |
| HHJ45_RS03880 () | 797361..797816 | + | 456 | WP_001087296.1 | Type II secretion system protein G | VF |
| HHJ45_RS03885 () | 797820..798383 | + | 564 | WP_001115139.1 | Type II secretion system protein H | VF |
| HHJ45_RS03890 () | 798380..798751 | + | 372 | WP_000820125.1 | Type II secretion system protein I | VF |
| HHJ45_RS03895 () | 798748..799353 | + | 606 | WP_001255030.1 | Type II secretion system protein J | VF |
| HHJ45_RS03900 () | 799350..800327 | + | 978 | WP_000633239.1 | Putative type II secretion system protein K | VF |
| HHJ45_RS03905 () | 800324..801502 | + | 1179 | WP_000094989.1 | Type II secretion system protein L | VF |
| HHJ45_RS03910 () | 801504..802040 | + | 537 | WP_000942795.1 | Type II secretion system protein M | VF |
| HHJ45_RS03915 () | 802323..803165 | - | 843 | Protein_768 | DUF4942 domain-containing protein | - |
| HHJ45_RS03920 () | 803250..803447 | - | 198 | WP_085949090.1 | DUF957 domain-containing protein | - |
| HHJ45_RS03925 () | 803475..803672 | - | 198 | Protein_770 | hypothetical protein | - |
| HHJ45_RS03930 () | 803669..804046 | - | 378 | WP_042966375.1 | TA system toxin CbtA family protein | Toxin Detail |
| HHJ45_RS03935 () | 804136..804504 | - | 369 | WP_001389198.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| HHJ45_RS03940 () | 804584..804805 | - | 222 | WP_001405861.1 | DUF987 domain-containing protein | - |
| HHJ45_RS03945 () | 804874..805350 | - | 477 | WP_001186724.1 | RadC family protein | - |
| HHJ45_RS03950 () | 805366..805851 | - | 486 | WP_032270302.1 | antirestriction protein | - |
| HHJ45_RS03955 () | 805943..806761 | - | 819 | WP_042970615.1 | DUF945 domain-containing protein | - |
| HHJ45_RS03960 () | 806851..807084 | - | 234 | WP_001278282.1 | DUF905 family protein | - |
| HHJ45_RS03965 () | 807090..807767 | - | 678 | WP_001097567.1 | hypothetical protein | - |
| HHJ45_RS03970 () | 807918..808598 | - | 681 | WP_001282912.1 | WYL domain-containing protein | - |
| HHJ45_RS03975 () | 808801..809685 | - | 885 | WP_042966405.1 | 50S ribosome-binding GTPase | - |
| HHJ45_RS03980 () | 809792..810724 | + | 933 | WP_023155730.1 | hypothetical protein | - |
| HHJ45_RS03985 () | 810721..811530 | - | 810 | WP_023155731.1 | hypothetical protein | - |
| HHJ45_RS03990 () | 813255..813986 | + | 732 | WP_042966774.1 | inovirus Gp2 family protein | - |
| HHJ45_RS03995 () | 814080..814736 | - | 657 | Protein_784 | transposase | - |
| HHJ45_RS04000 () | 815170..816774 | + | 1605 | WP_001067608.1 | DUF3987 domain-containing protein | - |
| HHJ45_RS04005 () | 818337..818903 | + | 567 | WP_042966776.1 | inovirus-type Gp2 protein | - |
| HHJ45_RS04010 () | 819023..819172 | - | 150 | WP_169073299.1 | hypothetical protein | - |
| HHJ45_RS04015 () | 819187..819759 | + | 573 | WP_042966778.1 | hypothetical protein | - |
| HHJ45_RS04020 () | 819828..820061 | + | 234 | WP_000958492.1 | AlpA family transcriptional regulator | - |
| HHJ45_RS04025 () | 820344..820880 | + | 537 | WP_042966779.1 | hypothetical protein | - |
| HHJ45_RS04030 () | 820882..821358 | - | 477 | WP_042966781.1 | ProQ/FinO family protein | - |
| HHJ45_RS04035 () | 821681..821908 | + | 228 | WP_157839752.1 | hypothetical protein | - |
| HHJ45_RS04040 () | 822023..822940 | + | 918 | WP_042970616.1 | Recombination-promoting nuclease RpnD | VF |
| HHJ45_RS04045 () | 823234..823527 | + | 294 | WP_171277352.1 | hypothetical protein | - |
| HHJ45_RS04050 () | 823680..825215 | - | 1536 | Protein_795 | IS66 family transposase | - |
| HHJ45_RS04055 () | 825236..825612 | - | 377 | Protein_796 | IS66 family insertion sequence element accessory protein TnpB | - |
| HHJ45_RS04060 () | 825914..827473 | - | 1560 | Protein_797 | IS66 family transposase | - |
| HHJ45_RS04065 () | 827493..827840 | - | 348 | WP_167803038.1 | IS66 family transposase ISCro1 | Transposase |
| HHJ45_RS04070 () | 827857..828520 | - | 664 | Protein_799 | transposase | - |
| HHJ45_RS04075 () | 829277..830032 | - | 756 | WP_001282653.1 | IS21 family transposase ISSso4 | Transposase |
| HHJ45_RS04080 () | 830049..831584 | - | 1536 | WP_042966923.1 | IS21 family transposase ISSso4 | Transposase |
| HHJ45_RS04085 () | 831822..833005 | - | 1184 | Protein_802 | IS3 family transposase IS629 | Transposase |
| HHJ45_RS04090 () | 833853..836573 | - | 2721 | WP_042966678.1 | autotransporter domain-containing protein | - |
| HHJ45_RS04095 () | 837562..837726 | + | 165 | WP_042966679.1 | YhfL family protein | - |
| HHJ45_RS04100 () | 838028..838384 | - | 357 | WP_052318697.1 | Right origin-binding protein | VF |
| HHJ45_RS04105 () | 838988..839410 | - | 423 | WP_042966681.1 | universal stress protein | - |
| HHJ45_RS04110 () | 839822..839965 | + | 144 | WP_000877738.1 | hypothetical protein | - |
| HHJ45_RS04115 () | 839979..841562 | - | 1584 | WP_040091524.1 | IS66 family transposase ISEc49 | Transposase |
| HHJ45_RS04120 () | 841605..841985 | - | 381 | WP_000957246.1 | IS66 family transposase ISEc49 | Transposase |
| HHJ45_RS04125 () | 841972..842301 | - | 330 | WP_001137792.1 | IS66 family transposase ISEc49 | Transposase |
| HHJ45_RS04130 () | 842525..843541 | - | 1017 | WP_042966846.1 | sulfite reductase subunit C | - |
| HHJ45_RS04135 () | 843552..844370 | - | 819 | WP_042966844.1 | anaerobic sulfite reductase subunit AsrB | - |
| HHJ45_RS04140 () | 844374..845417 | - | 1044 | WP_042966842.1 | anaerobic sulfite reductase subunit AsrA | - |
| HHJ45_RS04145 () | 845817..846440 | + | 624 | WP_001364382.1 | hypothetical protein | - |
| HHJ45_RS04150 () | 846536..846769 | + | 234 | WP_000124185.1 | hypothetical protein | - |
| HHJ45_RS04155 () | 846822..847013 | - | 192 | WP_001287883.1 | DUF4222 domain-containing protein | - |
| HHJ45_RS04160 () | 847734..847994 | + | 261 | Protein_817 | IS3 family transposase ISLad1 | Transposase |
| HHJ45_RS04165 () | 848137..849882 | + | 1746 | WP_024166230.1 | AAA family ATPase | - |
| HHJ45_RS04170 () | 850308..850748 | + | 441 | WP_001364403.1 | type VI secretion system ImpA family N-terminal domain-containing protein | - |
| HHJ45_RS04175 () | 850789..851656 | + | 868 | Protein_820 | ImpA domain protein | - |
| HHJ45_RS04180 () | 851773..852417 | + | 645 | WP_171277353.1 | hypothetical protein | - |
| HHJ45_RS04185 () | 852564..853794 | + | 1231 | Protein_822 | phosphoadenosine phosphosulfate reductase | - |
| HHJ45_RS04190 () | 853779..854417 | + | 639 | WP_000502858.1 | ParB N-terminal domain-containing protein | - |
| HHJ45_RS04195 () | 854496..854765 | + | 270 | WP_000226517.1 | PerC family transcriptional regulator | - |
| HHJ45_RS04200 () | 854786..855430 | + | 645 | WP_001364388.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|