MGE detailed information
MGE type: Genomic_island MGE length: 38798 bp
Accession: NZ_CP053258 Location: 1028203..1067000 Organism: Escherichia coli strain GF4-3 Replicon: chromosome
Accession: NZ_CP053258 Location: 1028203..1067000 Organism: Escherichia coli strain GF4-3 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HLY11_RS04980 () | 1023668..1024825 | + | 1158 | WP_171459510.1 | glucans biosynthesis protein MdoC | - |
| HLY11_RS04985 () | 1024833..1026314 | - | 1482 | WP_171459511.1 | cardiolipin synthase ClsC | - |
| HLY11_RS04990 () | 1026256..1026789 | - | 534 | WP_000857405.1 | O-acetyl-ADP-ribose deacetylase | - |
| HLY11_RS04995 () | 1026884..1027195 | - | 312 | WP_096149508.1 | type 1 fimbrial protein | - |
| HLY11_RS05000 () | 1027316..1027648 | - | 333 | WP_000992818.1 | curli assembly protein CsgC | - |
| HLY11_RS05005 () | 1027707..1028162 | - | 456 | WP_000771437.1 | curlin major subunit CsgA | - |
| HLY11_RS05010 () | 1028203..1028658 | - | 456 | WP_000791650.1 | Minor curlin subunit | VF |
| HLY11_RS05015 () | 1029411..1030061 | + | 651 | WP_047670641.1 | CsgBAC operon transcriptional regulatory protein | VF |
| HLY11_RS05020 () | 1030066..1030455 | + | 390 | WP_000833288.1 | Curli production assembly/transport component CsgE | VF |
| HLY11_RS05025 () | 1030480..1030896 | + | 417 | WP_052953494.1 | Curli production assembly/transport component CsgF | VF |
| HLY11_RS05030 () | 1030923..1031756 | + | 834 | WP_001189321.1 | Curli production assembly/transport component CsgG | VF |
| HLY11_RS05035 () | 1031821..1032312 | - | 492 | WP_001297187.1 | DUF1097 domain-containing protein | - |
| HLY11_RS05040 () | 1032414..1032968 | - | 555 | WP_001001902.1 | molecular chaperone YcdY | - |
| HLY11_RS05045 () | 1032992..1033729 | - | 738 | WP_000283664.1 | zinc-binding phosphatase | - |
| HLY11_RS05050 () | 1033784..1034722 | - | 939 | WP_171459512.1 | glyoxylate/hydroxypyruvate reductase GhrA | - |
| HLY11_RS05060 () | 1035193..1036035 | - | 843 | WP_005020348.1 | DUF4942 domain-containing protein | - |
| HLY11_RS05065 () | 1036080..1036535 | - | 456 | WP_149003091.1 | hypothetical protein | - |
| HLY11_RS05070 () | 1036532..1036906 | - | 375 | WP_052953490.1 | TA system toxin CbtA family protein | Toxin Detail |
| HLY11_RS05075 () | 1036996..1037364 | - | 369 | WP_024210831.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| HLY11_RS05080 () | 1037444..1037666 | - | 223 | Protein_1001 | DUF987 domain-containing protein | - |
| HLY11_RS05085 () | 1037729..1038205 | - | 477 | WP_001383023.1 | RadC family protein | - |
| HLY11_RS05090 () | 1038221..1038700 | - | 480 | WP_001383022.1 | antirestriction protein | - |
| HLY11_RS05095 () | 1038794..1039039 | - | 246 | WP_052953489.1 | hypothetical protein | - |
| HLY11_RS05100 () | 1039039..1039857 | - | 819 | WP_052953488.1 | DUF945 domain-containing protein | - |
| HLY11_RS05105 () | 1039947..1040885 | - | 939 | WP_000060628.1 | hypothetical protein | - |
| HLY11_RS05110 () | 1040951..1041361 | - | 411 | WP_000642912.1 | hypothetical protein | - |
| HLY11_RS05115 () | 1041467..1041682 | - | 216 | WP_052953487.1 | hypothetical protein | - |
| HLY11_RS05120 () | 1041695..1041841 | - | 147 | WP_001383016.1 | hypothetical protein | - |
| HLY11_RS05125 () | 1041845..1042552 | - | 708 | WP_000189408.1 | WYL domain-containing protein | - |
| HLY11_RS05130 () | 1042767..1043642 | - | 876 | WP_000165426.1 | GTPase family protein | - |
| HLY11_RS05135 () | 1044168..1044656 | - | 489 | WP_052953486.1 | hypothetical protein | - |
| HLY11_RS05140 () | 1044649..1045521 | - | 873 | WP_077816921.1 | winged helix family transcriptional regulator | - |
| HLY11_RS05145 () | 1045837..1045923 | + | 87 | WP_071777622.1 | hypothetical protein | - |
| HLY11_RS05150 () | 1046170..1046319 | + | 150 | WP_128863823.1 | transposase | - |
| HLY11_RS05155 () | 1047067..1047381 | + | 315 | WP_052953484.1 | hypothetical protein | - |
| HLY11_RS05160 () | 1047993..1048550 | + | 558 | WP_001043494.1 | Major fimbrial subunit SMF-1 | VF |
| HLY11_RS05165 () | 1048652..1049329 | + | 678 | WP_032296390.1 | putative fimbrial chaperone YadV | VF |
| HLY11_RS05170 () | 1049354..1051957 | + | 2604 | WP_052953483.1 | Outer membrane usher protein HtrE | VF |
| HLY11_RS05175 () | 1052042..1053190 | + | 1149 | WP_052953482.1 | type 1 fimbrial protein | - |
| HLY11_RS05180 () | 1053578..1054276 | + | 699 | Protein_1021 | IS66 family transposase ISCfr14 | Transposase |
| HLY11_RS05185 () | 1054277..1054527 | + | 251 | Protein_1022 | IS66 family transposase | - |
| HLY11_RS05190 () | 1054753..1055148 | - | 396 | Protein_1023 | hypothetical protein | - |
| HLY11_RS05195 () | 1055157..1055558 | - | 402 | Protein_1024 | hypothetical protein | - |
| HLY11_RS05200 () | 1055917..1056510 | - | 594 | Protein_1025 | inovirus-type Gp2 protein | - |
| HLY11_RS05205 () | 1056895..1058307 | - | 1413 | Protein_1026 | ISL3 family transposase | - |
| HLY11_RS05210 () | 1058542..1059750 | + | 1209 | Protein_1027 | IS256 family transposase ISEc39 | Transposase |
| HLY11_RS05215 () | 1059841..1061367 | - | 1527 | WP_052953478.1 | DUF3987 domain-containing protein | - |
| HLY11_RS05220 () | 1061392..1061616 | - | 225 | WP_052953477.1 | AlpA family phage regulatory protein | - |
| HLY11_RS05225 () | 1061717..1063561 | + | 1845 | WP_052953476.1 | hypothetical protein | - |
| HLY11_RS05230 () | 1065048..1066251 | - | 1204 | Protein_1031 | Prophage integrase IntA ; Integrase | Integrase |
| HLY11_RS05235 () | 1066542..1067000 | - | 459 | WP_052953475.1 | IS200-IS605 family transposase IS200C | Transposase |
| HLY11_RS05240 () | 1067330..1068316 | - | 987 | WP_052953474.1 | hypothetical protein | - |
| HLY11_RS05245 () | 1068313..1069254 | - | 942 | WP_123055189.1 | ACP S-malonyltransferase | - |
| HLY11_RS05250 () | 1069268..1070656 | - | 1389 | WP_052953473.1 | hypothetical protein | - |
| HLY11_RS05255 () | 1070653..1071441 | - | 789 | WP_052953472.1 | outer membrane lipoprotein-sorting protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|