MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 47276 bp
Accession: NZ_CP053252 Location: 1..47276 Organism: Escherichia coli strain SCU-204 Replicon: plasmid pSCU-204-2
Accession: NZ_CP053252 Location: 1..47276 Organism: Escherichia coli strain SCU-204 Replicon: plasmid pSCU-204-2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HHJ42_RS24775 () | 1..280 | - | 280 | Protein_0 | hypothetical protein | - |
| HHJ42_RS24780 () | 277..771 | - | 495 | WP_001523091.1 | hypothetical protein | - |
| HHJ42_RS24785 () | 947..1603 | + | 657 | WP_000839976.1 | helix-turn-helix domain-containing protein | - |
| HHJ42_RS24790 () | 1696..2070 | + | 375 | WP_004105266.1 | hypothetical protein | - |
| HHJ42_RS24795 () | 2221..2874 | + | 654 | WP_000156167.1 | ParA family protein | - |
| HHJ42_RS24800 () | 2918..3166 | + | 249 | WP_000730008.1 | hypothetical protein | - |
| HHJ42_RS24805 () | 3992..4186 | + | 195 | WP_167787531.1 | ash family protein | - |
| HHJ42_RS24810 () | 4297..4488 | + | 192 | WP_004105259.1 | hypothetical protein | - |
| HHJ42_RS24815 () | 4485..5627 | + | 1143 | WP_171274532.1 | ORF6N domain-containing protein | - |
| HHJ42_RS24820 () | 6234..6506 | - | 273 | WP_089591621.1 | helix-turn-helix domain-containing protein | - |
| HHJ42_RS24825 () | 6570..6950 | - | 381 | WP_000061763.1 | hypothetical protein | - |
| HHJ42_RS24830 () | 7218..7502 | + | 285 | WP_001673380.1 | hypothetical protein | - |
| HHJ42_RS24835 () | 7536..7835 | - | 300 | WP_171274533.1 | XRE family transcriptional regulator | Antitoxin Detail |
| HHJ42_RS24840 () | 7835..8182 | - | 348 | WP_000269912.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| HHJ42_RS24845 () | 8427..8690 | - | 264 | WP_000424604.1 | hypothetical protein | - |
| HHJ42_RS24850 () | 8714..9001 | - | 288 | WP_000356589.1 | hypothetical protein | - |
| HHJ42_RS24855 () | 9645..10481 | - | 837 | WP_024171747.1 | replication initiator protein RepA | - |
| HHJ42_RS24860 () | 11107..11652 | + | 546 | WP_001704996.1 | transferase | - |
| HHJ42_RS24865 () | 11616..12233 | - | 618 | WP_001523080.1 | tail fiber assembly protein | - |
| HHJ42_RS24870 () | 12233..15079 | - | 2847 | WP_094316868.1 | tail fiber protein | - |
| HHJ42_RS24875 () | 15110..15691 | - | 582 | WP_023908964.1 | phage tail protein I | - |
| HHJ42_RS24880 () | 15684..16808 | - | 1125 | WP_001705026.1 | baseplate J/gp47 family protein | - |
| HHJ42_RS24885 () | 16805..17125 | - | 321 | WP_001523074.1 | hypothetical protein | - |
| HHJ42_RS24890 () | 17122..17589 | - | 468 | WP_000635200.1 | phage tail protein | - |
| HHJ42_RS24895 () | 17586..18206 | - | 621 | WP_001523073.1 | phage baseplate assembly protein V | - |
| HHJ42_RS24900 () | 18209..19210 | - | 1002 | WP_001705025.1 | phage late control D family protein | - |
| HHJ42_RS24905 () | 19411..22203 | - | 2793 | WP_001523070.1 | phage tail tape measure protein | - |
| HHJ42_RS24910 () | 22358..22639 | - | 282 | WP_000450805.1 | phage tail assembly protein | - |
| HHJ42_RS24915 () | 22649..23170 | - | 522 | WP_001706256.1 | phage major tail tube protein | - |
| HHJ42_RS24920 () | 23187..24650 | - | 1464 | WP_001706255.1 | hypothetical protein | - |
| HHJ42_RS24925 () | 24650..24940 | - | 291 | WP_001523067.1 | hypothetical protein | - |
| HHJ42_RS24930 () | 24941..25426 | - | 486 | WP_000609134.1 | hypothetical protein | - |
| HHJ42_RS24935 () | 25423..25767 | - | 345 | WP_001083980.1 | hypothetical protein | - |
| HHJ42_RS24940 () | 25767..26159 | - | 393 | WP_001523066.1 | hypothetical protein | - |
| HHJ42_RS24945 () | 26160..27203 | - | 1044 | WP_001523065.1 | major capsid protein | - |
| HHJ42_RS24950 () | 27224..27607 | - | 384 | WP_001523063.1 | hypothetical protein | - |
| HHJ42_RS24955 () | 27617..28681 | - | 1065 | WP_171274535.1 | ATP-dependent Clp protease proteolytic subunit | VF |
| HHJ42_RS24960 () | 28674..30248 | - | 1575 | WP_001022885.1 | phage portal protein | - |
| HHJ42_RS24965 () | 30245..30484 | - | 240 | WP_001523057.1 | hypothetical protein | - |
| HHJ42_RS24970 () | 30496..32353 | - | 1858 | Protein_39 | phage terminase large subunit family protein | - |
| HHJ42_RS24975 () | 32359..32910 | - | 552 | WP_001019009.1 | hypothetical protein | - |
| HHJ42_RS24980 () | 32910..33500 | - | 591 | WP_001185429.1 | ParB/Srx family N-terminal domain-containing protein | - |
| HHJ42_RS24985 () | 34057..34752 | - | 696 | WP_171274536.1 | hypothetical protein | - |
| HHJ42_RS24990 () | 34793..36166 | - | 1374 | WP_016238701.1 | ParB N-terminal domain-containing protein | - |
| HHJ42_RS24995 () | 36166..36789 | - | 624 | WP_001523051.1 | ParB/Srx family N-terminal domain-containing protein | - |
| HHJ42_RS25000 () | 37024..37434 | - | 411 | WP_001523049.1 | hypothetical protein | - |
| HHJ42_RS25005 () | 37823..38122 | - | 300 | WP_001141358.1 | hypothetical protein | - |
| HHJ42_RS25010 () | 38197..38394 | - | 198 | WP_001222808.1 | hypothetical protein | - |
| HHJ42_RS25015 () | 38394..38663 | - | 270 | WP_000867916.1 | hypothetical protein | - |
| HHJ42_RS25020 () | 38776..39369 | - | 594 | WP_171274534.1 | S-adenosylmethionine-binding protein | - |
| HHJ42_RS25030 () | 40046..40324 | - | 279 | WP_000147212.1 | hypothetical protein | - |
| HHJ42_RS25035 () | 40321..40866 | - | 546 | WP_032154025.1 | glycoside hydrolase family 108 protein | - |
| HHJ42_RS25040 () | 40850..41146 | - | 297 | WP_000254764.1 | phage holin family protein | - |
| HHJ42_RS25045 () | 41133..41528 | - | 396 | WP_001271967.1 | phage holin family protein | - |
| HHJ42_RS25050 () | 41907..42623 | - | 717 | WP_023908961.1 | ead/Ea22-like family protein | - |
| HHJ42_RS25055 () | 42616..42960 | - | 345 | WP_001705006.1 | hypothetical protein | - |
| HHJ42_RS25060 () | 42963..43574 | - | 612 | WP_032154033.1 | phage family protein | - |
| HHJ42_RS25065 () | 43571..43729 | - | 159 | WP_001706266.1 | hypothetical protein | - |
| HHJ42_RS25070 () | 43759..44124 | - | 366 | WP_001521425.1 | hypothetical protein | - |
| HHJ42_RS25075 () | 44121..44402 | - | 282 | WP_000823235.1 | hypothetical protein | - |
| HHJ42_RS25080 () | 44480..45547 | - | 1068 | WP_016240767.1 | DUF3560 domain-containing protein | - |
| HHJ42_RS25085 () | 45717..46094 | - | 378 | WP_001250512.1 | hypothetical protein | - |
| HHJ42_RS25090 () | 46098..46430 | - | 333 | WP_001270825.1 | DUF1064 domain-containing protein | - |
| HHJ42_RS25095 () | 46427..46831 | - | 405 | WP_001014473.1 | hypothetical protein | - |
| HHJ42_RS25100 () | 46831..47064 | - | 234 | WP_000100624.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|