MGE detailed information
MGE type: Genomic_island MGE length: 58881 bp
Accession: NZ_CP053251 Location: 1026140..1085020 Organism: Escherichia coli strain SCU-204 Replicon: chromosome
Accession: NZ_CP053251 Location: 1026140..1085020 Organism: Escherichia coli strain SCU-204 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HHJ42_RS04785 () | 1022869..1023588 | - | 720 | WP_001540474.1 | two-component system response regulator DcuR | - |
| HHJ42_RS04790 () | 1023585..1025216 | - | 1632 | WP_001216482.1 | sensor histidine kinase | - |
| HHJ42_RS04795 () | 1025397..1025627 | + | 231 | WP_000373293.1 | (4Fe-4S)-binding protein | - |
| HHJ42_RS04800 () | 1025639..1025911 | + | 273 | WP_000405647.1 | N-acetyltransferase | - |
| HHJ42_RS04805 () | 1026140..1026436 | + | 297 | WP_001312331.1 | type V toxin-antitoxin system endoribonuclease antitoxin GhoS | Antitoxin Detail |
| HHJ42_RS04810 () | 1026464..1026637 | + | 174 | WP_001173343.1 | type V toxin-antitoxin system toxin GhoT | Toxin Detail |
| HHJ42_RS04815 () | 1026756..1028273 | - | 1518 | WP_171274423.1 | lysine--tRNA ligase | - |
| HHJ42_RS04820 () | 1028510..1029967 | - | 1458 | WP_000856826.1 | dipeptide/tripeptide permease DtpC | - |
| HHJ42_RS04825 () | 1030026..1032173 | - | 2148 | WP_001296667.1 | lysine decarboxylase CadA | - |
| HHJ42_RS04830 () | 1032253..1033587 | - | 1335 | WP_000092909.1 | cadaverine/lysine antiporter | - |
| HHJ42_RS04835 () | 1033953..1035491 | - | 1539 | WP_001187191.1 | lysine decarboxylation/transport transcriptional activator CadC | - |
| HHJ42_RS04840 () | 1036240..1036809 | - | 570 | WP_001560692.1 | DUF4942 domain-containing protein | - |
| HHJ42_RS04845 () | 1036906..1037103 | - | 198 | WP_000839281.1 | DUF957 domain-containing protein | - |
| HHJ42_RS04850 () | 1037115..1037603 | - | 489 | WP_000777545.1 | hypothetical protein | - |
| HHJ42_RS04855 () | 1037600..1037974 | - | 375 | WP_000854753.1 | TA system toxin CbtA family protein | Toxin Detail |
| HHJ42_RS04860 () | 1038064..1038432 | - | 369 | WP_001540478.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| HHJ42_RS04865 () | 1038595..1038816 | - | 222 | WP_000692311.1 | DUF987 domain-containing protein | - |
| HHJ42_RS04870 () | 1038879..1039355 | - | 477 | WP_001186786.1 | RadC family protein | - |
| HHJ42_RS04875 () | 1039371..1039856 | - | 486 | WP_000214398.1 | antirestriction protein | - |
| HHJ42_RS04880 () | 1039947..1040765 | - | 819 | WP_001773857.1 | DUF945 domain-containing protein | - |
| HHJ42_RS04885 () | 1040855..1041088 | - | 234 | WP_001278283.1 | DUF905 family protein | - |
| HHJ42_RS04890 () | 1041094..1041771 | - | 678 | WP_001097301.1 | hypothetical protein | - |
| HHJ42_RS04895 () | 1041919..1042599 | - | 681 | WP_001282919.1 | WYL domain-containing protein | - |
| HHJ42_RS04900 () | 1042802..1043686 | - | 885 | WP_001116801.1 | 50S ribosome-binding GTPase | - |
| HHJ42_RS04905 () | 1043787..1045010 | + | 1224 | WP_001773856.1 | hypothetical protein | - |
| HHJ42_RS04910 () | 1046463..1047194 | + | 732 | WP_001075472.1 | inovirus Gp2 family protein | - |
| HHJ42_RS04915 () | 1047541..1048116 | + | 576 | WP_000991593.1 | hypothetical protein | - |
| HHJ42_RS04920 () | 1048185..1048418 | + | 234 | WP_000958492.1 | AlpA family transcriptional regulator | - |
| HHJ42_RS04925 () | 1048430..1048655 | + | 226 | Protein_951 | hypothetical protein | - |
| HHJ42_RS04930 () | 1048717..1048983 | - | 267 | Protein_952 | IS3 family transposase IS2 | Transposase |
| HHJ42_RS04935 () | 1049074..1050232 | + | 1159 | Protein_953 | Multidrug resistance protein MexB | VF |
| HHJ42_RS04940 () | 1050353..1051003 | + | 651 | Protein_954 | TetR/AcrR family transcriptional regulator | - |
| HHJ42_RS04945 () | 1050975..1051319 | + | 345 | Protein_955 | Transposon Tn10 TetD protein | VF |
| HHJ42_RS04950 () | 1051676..1052221 | - | 546 | WP_000015571.1 | propanediol utilization system shell hexameric protein GrpS | - |
| HHJ42_RS04955 () | 1052266..1053417 | - | 1152 | WP_001001003.1 | propanediol utilization system methionine adenosyltransferase GrpR | - |
| HHJ42_RS04960 () | 1053546..1054247 | - | 702 | Protein_958 | helix-turn-helix transcriptional regulator | - |
| HHJ42_RS04965 () | 1054392..1055372 | - | 981 | WP_171274424.1 | IS5 family transposase ISKpn26 | Transposase |
| HHJ42_RS04970 () | 1055442..1055801 | - | 360 | Protein_960 | Cyclic di-GMP phosphodiesterase | VF |
| HHJ42_RS04975 () | 1055818..1057047 | - | 1230 | WP_171274425.1 | propanediol utilization sensor histidine kinase GrpP | - |
| HHJ42_RS04980 () | 1057630..1058151 | - | 522 | WP_000237741.1 | maturase | - |
| HHJ42_RS04985 () | 1058179..1058718 | - | 540 | WP_001332064.1 | maturase | - |
| HHJ42_RS04990 () | 1059204..1060109 | - | 906 | WP_001086421.1 | propanediol utilization system permease GrpO | - |
| HHJ42_RS04995 () | 1060246..1061163 | - | 918 | WP_001044977.1 | glycyl radical diol dehydratase-activating enzyme GrpN | - |
| HHJ42_RS05000 () | 1061272..1063824 | - | 2553 | WP_000890295.1 | glycyl radical diol dehydratase GrpM | - |
| HHJ42_RS05005 () | 1063873..1064448 | - | 576 | WP_000722279.1 | propanediol utilization system protease GrpL | - |
| HHJ42_RS05010 () | 1064459..1064758 | - | 300 | WP_000746009.1 | propanediol utilization system shell hexameric protein GrpK | - |
| HHJ42_RS05015 () | 1064782..1066299 | - | 1518 | WP_001773853.1 | Aldehyde-alcohol dehydrogenase | VF |
| HHJ42_RS05020 () | 1066360..1067145 | - | 786 | WP_001205499.1 | propanediol utilization microcompartment protein GrpI | - |
| HHJ42_RS05025 () | 1067167..1067448 | - | 282 | WP_001301171.1 | propanediol utilization system shell hexameric protein GrpH | - |
| HHJ42_RS05030 () | 1067733..1068929 | - | 1197 | WP_001362987.1 | propanediol utilization system propionate kinase GrpG | - |
| HHJ42_RS05035 () | 1068958..1069455 | - | 498 | WP_001332069.1 | propanediol utilization system heme-binding protein GrpF | - |
| HHJ42_RS05040 () | 1069483..1069752 | - | 270 | WP_000280292.1 | propanediol utilization microcompartment vertex protein GrpE | - |
| HHJ42_RS05045 () | 1069764..1070468 | - | 705 | WP_000370214.1 | propanediol utilization system flavoprotein GrpD | - |
| HHJ42_RS05050 () | 1070473..1071231 | - | 759 | WP_001332070.1 | propanediol utilization system chaperone GrpC | - |
| HHJ42_RS05055 () | 1071286..1071972 | - | 687 | WP_001109982.1 | propanediol utilization system phosphotransacylase GrpB | - |
| HHJ42_RS05060 () | 1072112..1073230 | - | 1119 | WP_000135343.1 | NAD-dependent methanol dehydrogenase | VF |
| HHJ42_RS05065 () | 1073617..1074080 | + | 464 | Protein_979 | DNA-binding protein | - |
| HHJ42_RS05070 () | 1074176..1074409 | + | 234 | WP_000124176.1 | hypothetical protein | - |
| HHJ42_RS05075 () | 1074462..1074653 | - | 192 | WP_001287878.1 | DUF4222 domain-containing protein | - |
| HHJ42_RS05080 () | 1075315..1075683 | + | 369 | WP_001350801.1 | ShlB/FhaC/HecB family hemolysin secretion/activation protein | - |
| HHJ42_RS05085 () | 1075653..1076153 | + | 501 | WP_072145580.1 | type VI secretion protein ImpA | - |
| HHJ42_RS05090 () | 1076392..1077864 | + | 1473 | Protein_984 | hypothetical protein | - |
| HHJ42_RS05095 () | 1077996..1079780 | + | 1785 | WP_000269403.1 | KAP family P-loop domain protein | - |
| HHJ42_RS05100 () | 1079780..1080532 | + | 753 | WP_000537317.1 | hypothetical protein | - |
| HHJ42_RS05105 () | 1080514..1081833 | + | 1320 | WP_000508958.1 | hypothetical protein | - |
| HHJ42_RS05110 () | 1081830..1082555 | + | 726 | WP_000020778.1 | TatD family hydrolase | - |
| HHJ42_RS05115 () | 1083108..1083683 | - | 576 | WP_001774140.1 | SLATT domain-containing protein | - |
| HHJ42_RS05120 () | 1083691..1085020 | - | 1330 | Protein_990 | nucleotidyltransferase | - |
| HHJ42_RS05125 () | 1085155..1085340 | - | 186 | Protein_991 | transposase domain-containing protein | - |
| HHJ42_RS05130 () | 1085361..1086517 | - | 1157 | Protein_992 | IS3 family transposase | - |
| HHJ42_RS05135 () | 1086587..1086934 | - | 348 | WP_000477079.1 | alcohol dehydrogenase catalytic domain-containing protein | - |
| HHJ42_RS05140 () | 1087552..1088245 | - | 694 | Protein_994 | IS1 family transposase | - |
| HHJ42_RS05145 () | 1088498..1089967 | + | 1470 | WP_001331566.1 | basic amino acid/polyamine antiporter | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|