MGE detailed information
MGE type: IScluster/Tn MGE length: 6114 bp
Accession: NZ_CP053245 Location: 4668217..4674330 Organism: Escherichia coli strain SCU-485 Replicon: chromosome
Accession: NZ_CP053245 Location: 4668217..4674330 Organism: Escherichia coli strain SCU-485 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HHJ54_RS22325 () | 4664282..4665232 | - | 951 | WP_001011024.1 | HTH-type transcriptional regulator Cbl | - |
| HHJ54_RS22330 () | 4665334..4666251 | - | 918 | WP_001011478.1 | nitrogen assimilation transcriptional regulator NAC | - |
| HHJ54_RS22340 () | 4666816..4668078 | + | 1263 | WP_000055690.1 | integrase arm-type DNA-binding domain-containing protein | - |
| HHJ54_RS22345 () | 4668217..4668675 | - | 459 | WP_000526101.1 | IS200-IS605 family transposase IS200C | Transposase |
| HHJ54_RS22350 () | 4669627..4670505 | - | 879 | WP_000511773.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| HHJ54_RS22355 () | 4670643..4670969 | + | 327 | Protein_4357 | hypothetical protein | - |
| HHJ54_RS22360 () | 4670950..4671306 | + | 357 | WP_001147230.1 | hypothetical protein | - |
| HHJ54_RS22365 () | 4671353..4671685 | - | 333 | WP_000373724.1 | type II toxin-antitoxin system PemK/MazF family toxin | Toxin Detail |
| HHJ54_RS22370 () | 4671686..4671943 | - | 258 | WP_000288812.1 | antitoxin | Antitoxin Detail |
| HHJ54_RS22375 () | 4672041..4672232 | + | 192 | WP_077561361.1 | hypothetical protein | - |
| HHJ54_RS22380 () | 4672291..4672497 | - | 207 | WP_000983730.1 | helix-turn-helix domain-containing protein | - |
| HHJ54_RS22385 () | 4672494..4672961 | - | 468 | WP_000201267.1 | hypothetical protein | - |
| HHJ54_RS22390 () | 4673194..4674330 | - | 1137 | WP_001580729.1 | ISAs1 family transposase ISEc1 | Transposase |
| HHJ54_RS22395 () | 4674483..4674632 | + | 150 | Protein_4365 | IS3 family transposase | - |
| HHJ54_RS22400 () | 4674640..4675140 | - | 501 | Protein_4366 | type VI secretion system tip protein VgrG | - |
| HHJ54_RS22405 () | 4675159..4675443 | - | 285 | WP_001580451.1 | type VI secretion system PAAR protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|