MGE detailed information
MGE type: Genomic_island MGE length: 21477 bp
Accession: NZ_CP053245 Location: 4178745..4200221 Organism: Escherichia coli strain SCU-485 Replicon: chromosome
Accession: NZ_CP053245 Location: 4178745..4200221 Organism: Escherichia coli strain SCU-485 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HHJ54_RS19880 () | 4174501..4175897 | - | 1397 | Protein_3873 | glutamate decarboxylase | - |
| HHJ54_RS19885 () | 4176268..4177431 | - | 1164 | Protein_3874 | peptidase M16 | - |
| HHJ54_RS19890 () | 4177445..4177570 | + | 126 | WP_122083086.1 | hypothetical protein | - |
| HHJ54_RS19895 () | 4177536..4178693 | - | 1158 | WP_001580651.1 | anaerobic sulfatase maturase | - |
| HHJ54_RS19900 () | 4178745..4180427 | - | 1683 | WP_001296072.1 | sulfatase | - |
| HHJ54_RS19905 () | 4180830..4181594 | - | 765 | Protein_3878 | acid stress response transcriptional regulator YdeO | - |
| HHJ54_RS19910 () | 4181670..4181867 | - | 198 | WP_000543391.1 | two-component system connector SafA | - |
| HHJ54_RS19915 () | 4182115..4184394 | - | 2280 | WP_000726723.1 | acid resistance putative oxidoreductase YdeP | - |
| HHJ54_RS19920 () | 4184733..4185647 | - | 915 | WP_000520594.1 | Type 1 fimbrin D-mannose specific adhesin | VF |
| HHJ54_RS19925 () | 4185699..4186211 | - | 513 | WP_170969233.1 | Protein FimG | VF |
| HHJ54_RS19930 () | 4186224..4186754 | - | 531 | WP_000876773.1 | Protein FimF | VF |
| HHJ54_RS19935 () | 4186768..4189419 | - | 2652 | WP_000123645.1 | Outer membrane usher protein FimD | VF |
| HHJ54_RS19940 () | 4189461..4190171 | - | 711 | WP_001195181.1 | Chaperone protein FocC | VF |
| HHJ54_RS19945 () | 4190532..4191095 | - | 564 | WP_001296074.1 | Type-1 fimbrial protein, A chain | VF |
| HHJ54_RS19950 () | 4191871..4192653 | - | 783 | WP_000699098.1 | SDR family oxidoreductase | - |
| HHJ54_RS19955 () | 4192793..4193485 | + | 693 | Protein_3888 | LysR family transcriptional regulator | - |
| HHJ54_RS19960 () | 4193734..4194798 | - | 1065 | WP_000859696.1 | alpha/beta fold hydrolase | - |
| HHJ54_RS19965 () | 4194956..4195717 | - | 762 | WP_001066620.1 | carboxymuconolactone decarboxylase family protein | - |
| HHJ54_RS19970 () | 4195695..4196060 | - | 366 | WP_000274389.1 | cupin domain-containing protein | - |
| HHJ54_RS19975 () | 4196562..4196909 | - | 348 | WP_001337832.1 | hypothetical protein | - |
| HHJ54_RS19980 () | 4196911..4197405 | - | 495 | WP_001337831.1 | AEC family transporter | - |
| HHJ54_RS19985 () | 4197948..4198361 | + | 414 | WP_042115247.1 | acetylxylan esterase | - |
| HHJ54_RS19990 () | 4198615..4199937 | - | 1323 | WP_001125428.1 | type II toxin-antitoxin system serine/threonine protein kinase toxin HipA | Toxin Detail |
| HHJ54_RS19995 () | 4199937..4200203 | - | 267 | WP_001304368.1 | type II toxin-antitoxin system antitoxin HipB | Antitoxin Detail |
| HHJ54_RS20000 () | 4200511..4201269 | + | 759 | WP_001286543.1 | trans-aconitate 2-methyltransferase | - |
| HHJ54_RS20005 () | 4201273..4202187 | - | 915 | WP_001313828.1 | bestrophin family inner membrane protein | - |
| HHJ54_RS20010 () | 4202384..4203835 | - | 1452 | WP_000854637.1 | tagaturonate reductase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|