MGE detailed information
MGE type: Prophage MGE length: 50068 bp
Accession: NZ_CP053234 Location: 4766346..4816413 Organism: Escherichia coli strain SCU-106 Replicon: chromosome
Accession: NZ_CP053234 Location: 4766346..4816413 Organism: Escherichia coli strain SCU-106 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HHJ24_RS23045 () | 4762078..4762899 | + | 822 | WP_000952736.1 | NAD-dependent protein deacylase | - |
| HHJ24_RS23050 () | 4763038..4763826 | - | 789 | WP_000713472.1 | TPM domain-containing protein | - |
| HHJ24_RS23055 () | 4763823..4764284 | - | 462 | WP_000076381.1 | DUF3592 domain-containing protein | - |
| HHJ24_RS23060 () | 4764342..4765388 | - | 1047 | WP_000759309.1 | spermidine/putrescine ABC transporter substrate-binding protein PotD | - |
| HHJ24_RS23065 () | 4765385..4766179 | - | 795 | WP_000580316.1 | spermidine/putrescine ABC transporter permease PotC | - |
| HHJ24_RS23070 () | 4766346..4767464 | - | 1119 | WP_000074972.1 | hypothetical protein ; Integrase | Integrase |
| HHJ24_RS23075 () | 4767433..4767702 | - | 270 | WP_000003742.1 | excisionase | - |
| HHJ24_RS23080 () | 4767764..4770235 | - | 2472 | WP_062883708.1 | exonuclease | - |
| HHJ24_RS23085 () | 4770329..4770520 | - | 192 | WP_024218353.1 | lysis protein YdfD | - |
| HHJ24_RS23090 () | 4770517..4770705 | - | 189 | WP_000854559.1 | cell division inhibition protein DicB | - |
| HHJ24_RS23095 () | 4771105..4771269 | + | 165 | WP_001299931.1 | hypothetical protein | - |
| HHJ24_RS23100 () | 4771273..4771491 | - | 219 | WP_001171952.1 | hypothetical protein | - |
| HHJ24_RS23105 () | 4771651..4771806 | - | 156 | WP_000379588.1 | DUF1391 family protein | - |
| HHJ24_RS23110 () | 4772098..4772376 | - | 279 | WP_001303511.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| HHJ24_RS23115 () | 4772378..4772569 | - | 192 | WP_001302048.1 | hypothetical protein | Antitoxin Detail |
| HHJ24_RS23120 () | 4772590..4772961 | - | 372 | WP_123007420.1 | hypothetical protein | - |
| HHJ24_RS23125 () | 4773059..4773361 | + | 303 | WP_000172738.1 | transcriptional regulator | - |
| HHJ24_RS23130 () | 4773358..4773783 | + | 426 | WP_032210757.1 | Rha family transcriptional regulator | - |
| HHJ24_RS23135 () | 4773806..4774768 | + | 963 | WP_016234248.1 | helix-turn-helix domain-containing protein | - |
| HHJ24_RS23140 () | 4774775..4775521 | + | 747 | WP_000788950.1 | IS21 family transposase ISAba8 | Transposase |
| HHJ24_RS23145 () | 4775543..4776256 | + | 714 | WP_170969545.1 | DUF1627 domain-containing protein | - |
| HHJ24_RS23150 () | 4776272..4776663 | + | 392 | Protein_4510 | DUF977 family protein | - |
| HHJ24_RS23155 () | 4776690..4777010 | + | 321 | WP_101896892.1 | hypothetical protein | - |
| HHJ24_RS23160 () | 4777007..4777231 | + | 225 | WP_021577603.1 | hypothetical protein | - |
| HHJ24_RS23165 () | 4777228..4777779 | + | 552 | WP_135560849.1 | ead/Ea22-like family protein | - |
| HHJ24_RS23170 () | 4777952..4778140 | + | 189 | WP_024193636.1 | hypothetical protein | - |
| HHJ24_RS23175 () | 4778142..4778320 | + | 179 | Protein_4515 | hypothetical protein | - |
| HHJ24_RS23180 () | 4778325..4778657 | + | 333 | WP_158004346.1 | hypothetical protein | - |
| HHJ24_RS23185 () | 4778654..4779571 | + | 918 | WP_135560847.1 | DUF551 domain-containing protein | - |
| HHJ24_RS23190 () | 4779687..4779791 | + | 105 | WP_001278450.1 | hypothetical protein | - |
| HHJ24_RS23195 () | 4779980..4780192 | + | 213 | WP_016232625.1 | type I toxin-antitoxin system Hok family toxin | - |
| HHJ24_RS23200 () | 4780360..4780638 | + | 279 | WP_024193993.1 | hypothetical protein | - |
| HHJ24_RS23205 () | 4780640..4781689 | + | 1050 | WP_170969546.1 | DUF968 domain-containing protein | - |
| HHJ24_RS23210 () | 4781703..4782065 | + | 363 | WP_032331587.1 | RusA family crossover junction endodeoxyribonuclease | - |
| HHJ24_RS23215 () | 4782058..4782747 | + | 690 | WP_170969547.1 | antiterminator | - |
| HHJ24_RS23220 () | 4782959..4783156 | + | 198 | WP_047082680.1 | hypothetical protein | - |
| HHJ24_RS23225 () | 4784212..4786191 | + | 1980 | WP_170969548.1 | SASA family carbohydrate esterase | - |
| HHJ24_RS23230 () | 4786337..4786531 | + | 195 | WP_000144786.1 | DUF1378 family protein | - |
| HHJ24_RS23235 () | 4786557..4786826 | + | 270 | WP_001537095.1 | DUF826 domain-containing protein | - |
| HHJ24_RS23240 () | 4786902..4787117 | + | 216 | WP_000284506.1 | class II holin family protein | - |
| HHJ24_RS23245 () | 4787121..4787912 | + | 792 | WP_001041949.1 | DUF1327 domain-containing protein | - |
| HHJ24_RS23250 () | 4788424..4788957 | + | 534 | WP_170969549.1 | lysozyme | - |
| HHJ24_RS23255 () | 4789114..4789296 | + | 183 | WP_021566721.1 | hypothetical protein | - |
| HHJ24_RS23260 () | 4789311..4789442 | + | 132 | WP_001280932.1 | hypothetical protein | - |
| HHJ24_RS23265 () | 4789665..4789850 | + | 186 | WP_032217790.1 | Rz1 family lipoprotein | - |
| HHJ24_RS23270 () | 4790508..4791014 | + | 507 | WP_040078692.1 | terminase small subunit | - |
| HHJ24_RS23275 () | 4790986..4792914 | + | 1929 | WP_062891540.1 | phage terminase large subunit family protein | - |
| HHJ24_RS23280 () | 4792898..4793104 | + | 207 | WP_000259002.1 | head-tail joining protein | - |
| HHJ24_RS23285 () | 4793101..4794693 | + | 1593 | WP_012601424.1 | phage portal protein | - |
| HHJ24_RS23290 () | 4794683..4796188 | + | 1506 | WP_032181872.1 | S49 family peptidase | - |
| HHJ24_RS23295 () | 4796225..4796572 | + | 348 | WP_021565183.1 | head decoration protein | - |
| HHJ24_RS23300 () | 4796630..4797658 | + | 1029 | WP_000522624.1 | major capsid protein | - |
| HHJ24_RS23305 () | 4797710..4798093 | + | 384 | WP_000201501.1 | DNA-packaging protein FI | - |
| HHJ24_RS23310 () | 4798086..4798439 | + | 354 | WP_032325851.1 | tail attachment protein | - |
| HHJ24_RS23315 () | 4798455..4798988 | + | 534 | WP_000974980.1 | phage tail protein | - |
| HHJ24_RS23320 () | 4798985..4799380 | + | 396 | WP_000683079.1 | phage minor tail U family protein | - |
| HHJ24_RS23325 () | 4799388..4800140 | + | 753 | WP_016232503.1 | phage tail protein | - |
| HHJ24_RS23330 () | 4800154..4800585 | + | 432 | WP_062891538.1 | phage minor tail protein G | - |
| HHJ24_RS23335 () | 4800612..4801025 | + | 414 | WP_170969550.1 | phage tail assembly protein T | - |
| HHJ24_RS23340 () | 4801006..4803579 | + | 2574 | WP_170969551.1 | phage tail tape measure protein | - |
| HHJ24_RS23345 () | 4803576..4803905 | + | 330 | WP_000847280.1 | phage tail protein | - |
| HHJ24_RS23350 () | 4803905..4804603 | + | 699 | WP_170969552.1 | phage minor tail protein L | - |
| HHJ24_RS23355 () | 4804614..4805357 | + | 744 | WP_170969553.1 | C40 family peptidase | - |
| HHJ24_RS23360 () | 4805255..4805893 | + | 639 | WP_047634908.1 | tail assembly protein | - |
| HHJ24_RS23365 () | 4806135..4809665 | + | 3531 | WP_170969554.1 | host specificity protein J | - |
| HHJ24_RS23370 () | 4809850..4811271 | + | 1422 | WP_032330533.1 | prophage tail fiber N-terminal domain-containing protein | - |
| HHJ24_RS23375 () | 4811621..4812292 | + | 672 | WP_001537058.1 | DUF4376 domain-containing protein | - |
| HHJ24_RS23380 () | 4812457..4812786 | - | 330 | WP_074015512.1 | YkgJ family cysteine cluster protein | - |
| HHJ24_RS23385 () | 4812951..4813814 | - | 864 | WP_000799399.1 | spermidine/putrescine ABC transporter permease PotB | - |
| HHJ24_RS23390 () | 4813798..4814934 | - | 1137 | WP_000531601.1 | Spermidine/putrescine import ATP-binding protein PotA | VF |
| HHJ24_RS23395 () | 4815184..4816413 | + | 1230 | WP_000359463.1 | peptidase T | - |
| HHJ24_RS23400 () | 4816559..4817680 | - | 1122 | WP_000456506.1 | [50S ribosomal protein L16]-arginine 3-hydroxylase | - |
| HHJ24_RS23405 () | 4817756..4819216 | - | 1461 | WP_000735412.1 | two-component system sensor histidine kinase PhoQ | - |
| HHJ24_RS23410 () | 4819216..4819887 | - | 672 | WP_001265481.1 | two-component system response regulator PhoP | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|