MGE detailed information
MGE type: IS/Tn MGE length: 333 bp
Accession: NZ_CP053232 Location: 114359..114691 Organism: Escherichia coli strain SCU-306 Replicon: plasmid pSCU-306-1
Accession: NZ_CP053232 Location: 114359..114691 Organism: Escherichia coli strain SCU-306 Replicon: plasmid pSCU-306-1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HHJ44_RS24860 () | 109761..111188 | - | 1428 | WP_000146668.1 | conjugal transfer protein TraB | - |
| HHJ44_RS24865 () | 111188..111892 | - | 705 | WP_072095570.1 | type-F conjugative transfer system secretin TraK | - |
| HHJ44_RS24870 () | 111903..112469 | - | 567 | WP_000399792.1 | type IV conjugative transfer system protein TraE | - |
| HHJ44_RS24875 () | 112491..112802 | - | 312 | WP_000012106.1 | type IV conjugative transfer system protein TraL | - |
| HHJ44_RS24880 () | 112817..113176 | - | 360 | WP_000340272.1 | type IV conjugative transfer system pilin TraA | - |
| HHJ44_RS24885 () | 113210..113437 | - | 228 | WP_001254386.1 | conjugal transfer relaxosome protein TraY | - |
| HHJ44_RS24890 () | 113531..114216 | - | 686 | Protein_133 | PAS domain-containing protein | - |
| HHJ44_RS24895 () | 114316..115010 | - | 695 | Protein_134 | IS1 family transposase | - |
| HHJ44_RS24900 () | 115181..115564 | - | 384 | WP_000124983.1 | relaxosome protein TraM | - |
| HHJ44_RS24905 () | 115841..116488 | + | 648 | WP_000614936.1 | transglycosylase SLT domain-containing protein | - |
| HHJ44_RS24910 () | 116785..117606 | - | 822 | WP_001234469.1 | DUF945 domain-containing protein | - |
| HHJ44_RS24915 () | 117727..118014 | - | 288 | WP_000107537.1 | hypothetical protein | - |
| HHJ44_RS24920 () | 118078..118306 | + | 229 | Protein_139 | hypothetical protein | - |
| HHJ44_RS24925 () | 118925..119083 | - | 159 | WP_001312861.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| - () | 119127..119351 | - | 225 | NuclAT_0 | - | Antitoxin Detail |
| - () | 119127..119351 | - | 225 | NuclAT_0 | - | Antitoxin Detail |
| - () | 119127..119351 | - | 225 | NuclAT_0 | - | Antitoxin Detail |
| - () | 119127..119351 | - | 225 | NuclAT_0 | - | Antitoxin Detail |
| HHJ44_RS24930 () | 119163..119351 | + | 189 | WP_001299721.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|