MGE detailed information
MGE type: Genomic_island MGE length: 18593 bp
Accession: NZ_CP053231 Location: 4453497..4472089 Organism: Escherichia coli strain SCU-306 Replicon: chromosome
Accession: NZ_CP053231 Location: 4453497..4472089 Organism: Escherichia coli strain SCU-306 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HHJ44_RS21450 () | 4449465..4449968 | - | 504 | WP_000041480.1 | type VI secretion system contractile sheath small subunit | - |
| HHJ44_RS21455 () | 4450674..4451190 | + | 517 | Protein_4194 | Hcp family type VI secretion system effector | - |
| HHJ44_RS21460 () | 4451409..4453390 | + | 1982 | Protein_4195 | type VI secretion system tip protein VgrG | - |
| HHJ44_RS21465 () | 4453497..4454543 | + | 1047 | WP_000571853.1 | DUF2169 domain-containing protein | - |
| HHJ44_RS21470 () | 4454536..4455975 | + | 1440 | WP_000528852.1 | DUF4150 domain-containing protein | - |
| HHJ44_RS21475 () | 4455950..4456240 | + | 291 | WP_000513317.1 | hypothetical protein | - |
| HHJ44_RS21480 () | 4456498..4457262 | + | 765 | Protein_4199 | ISAs1 family transposase ISEc1 | Transposase |
| HHJ44_RS21485 () | 4457491..4457994 | + | 504 | WP_000227712.1 | hypothetical protein | - |
| HHJ44_RS21490 () | 4458088..4458576 | + | 489 | WP_001298174.1 | integrating conjugative element protein | - |
| HHJ44_RS21495 () | 4458602..4458796 | + | 195 | Protein_4202 | transposase | - |
| HHJ44_RS21500 () | 4458847..4459617 | - | 771 | WP_001118042.1 | 2-oxoglutaramate amidase | - |
| HHJ44_RS21505 () | 4459771..4460244 | + | 474 | WP_000532690.1 | Ivy family C-type lysozyme inhibitor | - |
| HHJ44_RS21510 () | 4460287..4462731 | - | 2445 | WP_000973137.1 | Acyl-coenzyme A dehydrogenase | VF |
| HHJ44_RS21515 () | 4462971..4463549 | + | 579 | WP_000284050.1 | Phosphoheptose isomerase | VF |
| HHJ44_RS21520 () | 4463754..4464521 | + | 768 | WP_001331866.1 | class II glutamine amidotransferase | - |
| HHJ44_RS21525 () | 4464492..4465232 | - | 741 | WP_001225679.1 | murein L,D-transpeptidase | - |
| HHJ44_RS21530 () | 4465544..4466293 | + | 750 | WP_000093934.1 | Murein DD-endopeptidase MepH | VF |
| HHJ44_RS21535 () | 4466469..4466966 | + | 498 | WP_000006241.1 | REP-associated tyrosine transposase RayT | - |
| HHJ44_RS21540 () | 4467049..4467207 | - | 159 | WP_014639450.1 | hypothetical protein | - |
| HHJ44_RS21545 () | 4467286..4469025 | - | 1740 | WP_001331867.1 | Flagellar biosynthesis protein FlhA | VF |
| HHJ44_RS21550 () | 4468970..4469755 | + | 786 | WP_000207544.1 | Chemotaxis protein LafU | VF |
| HHJ44_RS21555 () | 4469826..4470881 | + | 1056 | WP_001226168.1 | DNA polymerase IV | - |
| HHJ44_RS21560 () | 4470933..4471226 | + | 294 | WP_000554758.1 | type I toxin-antitoxin system antitoxin YafN | Antitoxin Detail |
| HHJ44_RS21565 () | 4471229..4471627 | + | 399 | WP_001263500.1 | type II toxin-antitoxin system mRNA interferase toxin YafO | Toxin Detail |
| HHJ44_RS21570 () | 4471637..4472089 | + | 453 | WP_001059895.1 | GNAT family N-acetyltransferase | - |
| HHJ44_RS21575 () | 4472267..4473418 | + | 1152 | WP_001331869.1 | RNA ligase RtcB family protein | - |
| HHJ44_RS21580 () | 4473415..4474029 | + | 615 | WP_000602123.1 | peptide chain release factor H | - |
| HHJ44_RS21585 () | 4474086..4475543 | - | 1458 | WP_001292999.1 | cytosol nonspecific dipeptidase | - |
| HHJ44_RS21590 () | 4475804..4476262 | + | 459 | WP_001291988.1 | xanthine phosphoribosyltransferase | - |
| - () | 4476858..4476938 | + | 81 | NuclAT_4 | - | - |
| - () | 4476858..4476938 | + | 81 | NuclAT_4 | - | - |
| - () | 4476858..4476938 | + | 81 | NuclAT_4 | - | - |
| - () | 4476858..4476938 | + | 81 | NuclAT_4 | - | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|