MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 59366 bp
Accession: NZ_CP053095 Location: 1..59366 Organism: Lacticaseibacillus paracasei strain CLP-Y5 Replicon: plasmid pCLP-Y5-2
Accession: NZ_CP053095 Location: 1..59366 Organism: Lacticaseibacillus paracasei strain CLP-Y5 Replicon: plasmid pCLP-Y5-2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HLG73_RS15395 (HLG73_15605) | 1..1431 | + | 1431 | WP_003582065.1 | ISLre2 family transposase ISLrh4 | Transposase |
| HLG73_RS15400 (HLG73_15610) | 1682..1786 | - | 105 | WP_010493218.1 | putative holin-like toxin | - |
| HLG73_RS15405 (HLG73_15620) | 2125..4671 | - | 2547 | WP_273634839.1 | ArdC-like ssDNA-binding domain-containing protein | - |
| HLG73_RS15410 (HLG73_15625) | 4658..4903 | - | 246 | WP_273634852.1 | hypothetical protein | - |
| HLG73_RS15415 (HLG73_15630) | 4959..6203 | - | 1245 | WP_273634840.1 | hypothetical protein | Relaxase |
| HLG73_RS15420 (HLG73_15635) | 6196..6633 | - | 438 | WP_119182964.1 | hypothetical protein | - |
| HLG73_RS15425 (HLG73_15640) | 6672..6917 | - | 246 | WP_081528688.1 | hypothetical protein | - |
| HLG73_RS15430 (HLG73_15645) | 6958..7137 | - | 180 | WP_270777742.1 | plasmid replication protein | - |
| HLG73_RS15435 (HLG73_15650) | 7730..8551 | - | 822 | WP_003589987.1 | hypothetical protein | - |
| HLG73_RS15440 (HLG73_15655) | 8541..8948 | - | 408 | WP_003605677.1 | thioredoxin domain-containing protein | - |
| HLG73_RS15445 (HLG73_15660) | 8945..9589 | - | 645 | WP_273634841.1 | hypothetical protein | - |
| HLG73_RS15450 (HLG73_15665) | 9605..10552 | - | 948 | WP_273634853.1 | Gamma-D-glutamyl-L-lysine dipeptidyl-peptidase | VF |
| HLG73_RS15455 (HLG73_15670) | 10567..10875 | + | 309 | WP_273634842.1 | IS3 family transposase IS1163 | Transposase |
| HLG73_RS15460 (HLG73_15675) | 10885..11763 | - | 879 | WP_273634843.1 | IS3 family transposase ISSth1b | Transposase |
| HLG73_RS15465 (HLG73_15680) | 11760..12488 | - | 729 | WP_273634844.1 | IS3 family transposase ISSth1b | Transposase |
| HLG73_RS15470 (HLG73_15685) | 12534..12830 | - | 297 | WP_225366680.1 | IS3 family transposase IS1520 | Transposase |
| HLG73_RS15475 (HLG73_15690) | 13762..14583 | + | 822 | WP_273634845.1 | ParA family protein | - |
| HLG73_RS15480 (HLG73_15695) | 14593..15060 | + | 468 | WP_273634846.1 | hypothetical protein | - |
| HLG73_RS15485 (HLG73_15700) | 15680..17158 | + | 1479 | WP_273634847.1 | primase C-terminal domain-containing protein | - |
| HLG73_RS15495 (HLG73_15710) | 19342..19611 | - | 270 | WP_076652980.1 | hypothetical protein | - |
| HLG73_RS15500 (HLG73_15715) | 19875..21638 | + | 1764 | WP_273634849.1 | potassium-transporting ATPase subunit KdpA | - |
| HLG73_RS15505 (HLG73_15720) | 21659..23725 | + | 2067 | WP_273634850.1 | potassium-transporting ATPase subunit KdpB | - |
| HLG73_RS15510 (HLG73_15725) | 23745..24320 | + | 576 | WP_079323058.1 | potassium-transporting ATPase subunit C | - |
| HLG73_RS15515 (HLG73_15730) | 24474..24680 | - | 207 | Protein_24 | ISL3 family transposase IS1165 | Transposase |
| HLG73_RS15520 (HLG73_15735) | 25355..27952 | + | 2598 | WP_128538900.1 | sensor histidine kinase KdpD | - |
| HLG73_RS15525 (HLG73_15740) | 27949..28653 | + | 705 | WP_079323062.1 | KDP operon transcriptional regulatory protein KdpE | VF |
| HLG73_RS15530 (HLG73_15745) | 28818..29738 | + | 921 | WP_273634851.1 | IS30 family transposase ISLpl1 | Transposase |
| HLG73_RS15535 (HLG73_15750) | 29761..30330 | + | 570 | Protein_28 | transposase | - |
| HLG73_RS15540 (HLG73_15755) | 30600..30842 | + | 243 | WP_016363783.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | Antitoxin Detail |
| HLG73_RS15545 (HLG73_15760) | 30835..31116 | + | 282 | WP_003573774.1 | type II toxin-antitoxin system YafQ family toxin | Toxin Detail |
| HLG73_RS15550 (HLG73_15765) | 31253..31903 | + | 651 | WP_003586220.1 | Tn3 family transposase TnpR_ISPa40 | Transposase |
| HLG73_RS15555 (HLG73_15770) | 31909..32193 | + | 285 | WP_016383626.1 | BRCT domain-containing protein | - |
| HLG73_RS15560 (HLG73_15775) | 32585..32716 | + | 132 | Protein_33 | helix-turn-helix domain-containing protein | - |
| HLG73_RS15565 (HLG73_15780) | 32775..33731 | - | 957 | WP_003569652.1 | LacI family DNA-binding transcriptional regulator | - |
| HLG73_RS15570 (HLG73_15785) | 33915..34772 | - | 858 | WP_003569650.1 | sugar ABC transporter permease | - |
| HLG73_RS15575 (HLG73_15790) | 34775..36133 | - | 1359 | WP_003569648.1 | sugar ABC transporter permease | - |
| HLG73_RS15580 (HLG73_15795) | 36187..37419 | - | 1233 | WP_003569646.1 | extracellular solute-binding protein | - |
| HLG73_RS15585 (HLG73_15800) | 37511..39118 | - | 1608 | WP_016383624.1 | alpha-glucosidase | - |
| HLG73_RS15590 (HLG73_15805) | 39131..40258 | - | 1128 | WP_003569644.1 | Trehalose import ATP-binding protein SugC | VF |
| HLG73_RS15595 (HLG73_15810) | 40251..40931 | - | 681 | WP_003569641.1 | beta-phosphoglucomutase | - |
| HLG73_RS15600 (HLG73_15815) | 40924..43182 | - | 2259 | WP_273634837.1 | glycoside hydrolase family 65 protein | - |
| HLG73_RS15605 (HLG73_15820) | 43301..45040 | - | 1740 | WP_003569637.1 | glycoside hydrolase family 13 protein | - |
| HLG73_RS15610 (HLG73_15825) | 45043..46710 | - | 1668 | WP_016383623.1 | alpha-glucosidase | - |
| HLG73_RS15615 (HLG73_15830) | 46969..47277 | + | 309 | WP_032775139.1 | IS3 family transposase IS1163 | Transposase |
| HLG73_RS15620 (HLG73_15835) | 47371..48165 | - | 795 | WP_273634838.1 | IS3 family transposase ISSth1b | Transposase |
| HLG73_RS15625 (HLG73_15840) | 48162..48890 | - | 729 | WP_265013422.1 | IS3 family transposase ISSth1b | Transposase |
| HLG73_RS15630 (HLG73_15845) | 48992..49279 | + | 288 | WP_225365915.1 | IS3 family transposase IS1520 | Transposase |
| HLG73_RS15635 (HLG73_15850) | 49285..50205 | - | 921 | WP_016383326.1 | IS30 family transposase ISLpl1 | Transposase |
| HLG73_RS15640 (HLG73_15855) | 50372..51271 | - | 900 | WP_081528898.1 | proline iminopeptidase-family hydrolase | - |
| HLG73_RS15645 (HLG73_15860) | 51275..52132 | - | 858 | WP_081528899.1 | M55 family metallopeptidase | - |
| HLG73_RS15650 (HLG73_15865) | 52132..53217 | - | 1086 | WP_081528902.1 | M42 family peptidase | - |
| HLG73_RS15655 (HLG73_15870) | 53245..54864 | - | 1620 | WP_081528900.1 | peptide ABC transporter substrate-binding protein | - |
| HLG73_RS15660 (HLG73_15875) | 55701..55874 | - | 174 | WP_263851115.1 | hypothetical protein | - |
| HLG73_RS15665 (HLG73_15880) | 55987..56271 | - | 285 | WP_225365917.1 | glutaredoxin family protein | - |
| HLG73_RS15670 (HLG73_15885) | 56320..56679 | - | 360 | WP_081528901.1 | transcriptional regulator | - |
| HLG73_RS15675 (HLG73_15890) | 57343..57789 | + | 447 | WP_074393004.1 | hypothetical protein | - |
| HLG73_RS15680 (HLG73_15895) | 57802..58251 | + | 450 | WP_074393005.1 | nitroreductase | - |
| HLG73_RS15685 (HLG73_15900) | 58244..59122 | + | 879 | WP_225442018.1 | site-specific DNA-methyltransferase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|