MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 39423 bp
Accession: NZ_CP053073 Location: 99282..138704 Organism: Usitatibacter palustris strain Swamp67 Replicon: chromosome
Accession: NZ_CP053073 Location: 99282..138704 Organism: Usitatibacter palustris strain Swamp67 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DSM104440_RS00450 () | 94887..95753 | + | 867 | WP_171159727.1 | YicC family protein | - |
| DSM104440_RS00455 () | 95764..96372 | + | 609 | WP_171159730.1 | guanylate kinase | - |
| DSM104440_RS00460 () | 96385..96606 | + | 222 | WP_171159732.1 | DNA-directed RNA polymerase subunit omega | - |
| DSM104440_RS00465 () | 96638..98827 | + | 2190 | WP_171159734.1 | bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase | - |
| DSM104440_RS00470 () | 98897..99271 | + | 375 | WP_171159736.1 | RidA family protein | - |
| DSM104440_RS00475 () | 99282..101297 | + | 2016 | WP_212758151.1 | ATP-dependent DNA helicase RecG | - |
| DSM104440_RS00480 () | 101294..101821 | + | 528 | WP_171159737.1 | chorismate lyase | - |
| DSM104440_RS00485 () | 101818..102693 | + | 876 | WP_171159739.1 | 4-hydroxybenzoate octaprenyltransferase | - |
| DSM104440_RS00490 () | 102672..103193 | + | 522 | WP_171159741.1 | NAD(P)H-dependent oxidoreductase | - |
| DSM104440_RS00495 () | 103199..104977 | + | 1779 | WP_171159743.1 | glutathione-regulated potassium-efflux system protein KefC | - |
| DSM104440_RS00500 () | 105259..106527 | + | 1269 | WP_171159745.1 | acetyl-CoA C-acyltransferase | - |
| DSM104440_RS00505 () | 106529..107191 | + | 663 | WP_171159747.1 | Ureidoglycolate lyase | VF |
| DSM104440_RS00510 () | 107224..107571 | + | 348 | WP_171159749.1 | hypothetical protein | - |
| DSM104440_RS00515 () | 107573..108838 | - | 1266 | WP_171159751.1 | amidohydrolase family protein | - |
| DSM104440_RS00520 () | 108847..110526 | - | 1680 | WP_212758295.1 | STAS domain-containing protein | - |
| DSM104440_RS00525 () | 110541..111275 | - | 735 | WP_212758152.1 | Transcriptional regulatory protein OmpR | VF |
| DSM104440_RS00530 () | 111340..113829 | + | 2490 | WP_171159757.1 | MASE1 domain-containing protein | - |
| DSM104440_RS00535 () | 113926..114822 | + | 897 | WP_171159759.1 | EAL domain-containing protein | - |
| DSM104440_RS00540 () | 114949..116043 | + | 1095 | WP_171159761.1 | hypothetical protein | - |
| DSM104440_RS00545 () | 116173..116475 | + | 303 | WP_171159763.1 | hypothetical protein | - |
| DSM104440_RS00550 () | 116666..117289 | + | 624 | WP_171159765.1 | N-methyl-D-aspartate receptor NMDAR2C subunit | - |
| DSM104440_RS00555 () | 117380..117868 | + | 489 | WP_171159767.1 | hypothetical protein | - |
| DSM104440_RS00560 () | 117868..118455 | + | 588 | WP_171159769.1 | GNAT family N-acetyltransferase | - |
| DSM104440_RS00565 () | 118530..118874 | + | 345 | WP_171159771.1 | toxin | Toxin Detail |
| DSM104440_RS00570 () | 118871..119218 | + | 348 | WP_171159773.1 | transcriptional regulator | Antitoxin Detail |
| DSM104440_RS00575 () | 119373..119933 | - | 561 | WP_171159775.1 | hypothetical protein | - |
| DSM104440_RS19200 () | 119921..120427 | - | 507 | WP_212758153.1 | Putative deoxyribonuclease RhsC | VF |
| DSM104440_RS00585 () | 120480..121382 | - | 903 | WP_212758154.1 | hypothetical protein | - |
| DSM104440_RS00590 () | 121370..121888 | - | 519 | WP_171159779.1 | RHS repeat-associated core domain-containing protein | - |
| DSM104440_RS00595 () | 122361..125039 | + | 2679 | WP_171159781.1 | IPT/TIG domain-containing protein | - |
| DSM104440_RS00600 () | 125039..126349 | + | 1311 | WP_171159783.1 | RHS repeat protein | - |
| DSM104440_RS00605 () | 126307..129279 | + | 2973 | WP_171159785.1 | RHS repeat protein | - |
| DSM104440_RS00610 () | 129290..129784 | + | 495 | WP_171159787.1 | hypothetical protein | - |
| DSM104440_RS00615 () | 129809..130405 | + | 597 | WP_171165567.1 | RHS repeat-associated core domain-containing protein | - |
| DSM104440_RS00620 () | 131021..131245 | - | 225 | WP_171159789.1 | hypothetical protein | - |
| DSM104440_RS00625 () | 131340..131903 | - | 564 | WP_171165569.1 | RHS repeat-associated core domain-containing protein | - |
| DSM104440_RS00630 () | 132513..133073 | - | 561 | WP_212758155.1 | hypothetical protein | - |
| DSM104440_RS00635 () | 133459..133986 | - | 528 | WP_171159791.1 | RHS repeat-associated core domain-containing protein | - |
| DSM104440_RS19205 () | 134308..134835 | - | 528 | WP_212758296.1 | hypothetical protein | - |
| DSM104440_RS19210 () | 135287..135868 | - | 582 | WP_212758297.1 | hypothetical protein | - |
| DSM104440_RS00655 () | 135843..136247 | - | 405 | WP_171159795.1 | hypothetical protein | - |
| DSM104440_RS00660 () | 136244..136801 | - | 558 | WP_171165573.1 | RHS repeat-associated core domain-containing protein | - |
| DSM104440_RS00665 () | 136791..137096 | - | 306 | WP_171159797.1 | hypothetical protein | - |
| DSM104440_RS00670 () | 137083..137676 | - | 594 | WP_171159799.1 | hypothetical protein | - |
| DSM104440_RS00675 () | 137691..138704 | + | 1014 | WP_171159801.1 | IS91 family transposase ISMno24 | Transposase |
| DSM104440_RS00680 () | 138807..139946 | - | 1140 | WP_171159803.1 | PilT/PilU family type 4a pilus ATPase | - |
| DSM104440_RS00685 () | 139957..141000 | - | 1044 | WP_171159805.1 | type IV pilus twitching motility protein PilT | - |
| DSM104440_RS00690 () | 141047..141760 | + | 714 | WP_171159807.1 | YggS family pyridoxal phosphate-dependent enzyme | - |
| DSM104440_RS00695 () | 141757..142578 | + | 822 | WP_171159809.1 | pyrroline-5-carboxylate reductase | - |
| DSM104440_RS00700 () | 142575..143162 | + | 588 | WP_171159811.1 | YggT family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|