MGE detailed information
MGE type: IS/Tn MGE length: 561 bp
Accession: NZ_CP053024 Location: 30282..30842 Organism: Sphingobium yanoikuyae strain YC-XJ2 Replicon: plasmid p-C-Sy
Accession: NZ_CP053024 Location: 30282..30842 Organism: Sphingobium yanoikuyae strain YC-XJ2 Replicon: plasmid p-C-Sy
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HH800_RS28720 () | 25374..25667 | - | 294 | WP_169863569.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| HH800_RS28725 () | 25660..25938 | - | 279 | WP_159368254.1 | type II toxin-antitoxin system ParD family antitoxin | - |
| HH800_RS28730 () | 26071..26199 | + | 129 | WP_169863570.1 | hypothetical protein | - |
| HH800_RS28735 () | 26186..26416 | + | 231 | WP_169863571.1 | BrnA antitoxin family protein | - |
| HH800_RS28740 () | 26448..26775 | + | 328 | Protein_33 | hypothetical protein | - |
| HH800_RS28745 () | 26818..27210 | - | 393 | Protein_34 | IS66 family insertion sequence element accessory protein TnpB | - |
| HH800_RS28750 () | 27112..28485 | + | 1374 | WP_169863572.1 | hypothetical protein | - |
| HH800_RS28755 () | 28599..28778 | - | 180 | WP_169863561.1 | hypothetical protein | - |
| HH800_RS28760 () | 28922..29203 | + | 282 | WP_169863573.1 | WGR domain-containing protein | - |
| HH800_RS28765 () | 29331..29624 | - | 294 | WP_169863574.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| HH800_RS28770 () | 29612..29890 | - | 279 | WP_059153569.1 | CopG family ribbon-helix-helix protein | Antitoxin Detail |
| HH800_RS28775 () | 30282..30842 | + | 561 | WP_169863596.1 | Tn3 family transposase TnpR_TnAs3 | Transposase |
| HH800_RS28780 () | 30857..32194 | + | 1338 | WP_169863575.1 | phosphoglucosamine mutase | - |
| HH800_RS28785 () | 32227..32535 | - | 309 | WP_169863576.1 | hypothetical protein | - |
| HH800_RS28790 () | 32532..33788 | - | 1257 | WP_169863577.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|