MGE detailed information
MGE type: Genomic_island MGE length: 30270 bp
Accession: NZ_CP053021 Location: 4825162..4855431 Organism: Sphingobium yanoikuyae strain YC-XJ2 Replicon: chromosome
Accession: NZ_CP053021 Location: 4825162..4855431 Organism: Sphingobium yanoikuyae strain YC-XJ2 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HH800_RS23200 () | 4820642..4821253 | - | 612 | WP_169862668.1 | hypothetical protein | - |
| HH800_RS23205 () | 4821554..4823857 | - | 2304 | WP_065846910.1 | nitric-oxide reductase large subunit | - |
| HH800_RS23210 () | 4823876..4824340 | - | 465 | WP_010335700.1 | membrane protein | - |
| HH800_RS23215 () | 4824333..4824626 | - | 294 | WP_010335699.1 | DUF1971 domain-containing protein | - |
| HH800_RS23220 () | 4824623..4825075 | - | 453 | WP_169862670.1 | group III truncated hemoglobin | - |
| HH800_RS23225 () | 4825162..4825611 | + | 450 | WP_065846908.1 | Rrf2 family transcriptional regulator | - |
| HH800_RS23230 () | 4825778..4827199 | + | 1422 | WP_169862671.1 | IS1182 family transposase ISPpu20 | Transposase |
| HH800_RS23235 () | 4827357..4828319 | + | 963 | WP_169862673.1 | DUF1738 domain-containing protein | - |
| HH800_RS23240 () | 4828481..4830583 | + | 2103 | WP_169862675.1 | ParB/RepB/Spo0J family partition protein | - |
| HH800_RS23245 () | 4830715..4831131 | + | 417 | WP_169862677.1 | hypothetical protein | - |
| HH800_RS23250 () | 4831128..4831394 | + | 267 | WP_169862679.1 | hypothetical protein | - |
| HH800_RS23255 () | 4831391..4831687 | + | 297 | WP_169862681.1 | hypothetical protein | - |
| HH800_RS23260 () | 4831846..4834071 | + | 2226 | Protein_4579 | strawberry notch family protein | - |
| HH800_RS23265 () | 4834224..4835456 | + | 1233 | WP_008832423.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| HH800_RS23270 () | 4835453..4836808 | + | 1356 | WP_008832422.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| HH800_RS23275 () | 4836805..4837809 | + | 1005 | WP_169861176.1 | IS91 family transposase ISWz1 | Transposase |
| HH800_RS23280 () | 4838146..4839996 | + | 1851 | WP_206379252.1 | strawberry notch C-terminal domain-containing protein | - |
| HH800_RS23285 () | 4839996..4841030 | + | 1035 | WP_169862683.1 | toprim domain-containing protein | - |
| HH800_RS23290 () | 4841344..4842270 | + | 927 | WP_169862685.1 | DUF2493 domain-containing protein | - |
| HH800_RS23295 () | 4842366..4842620 | + | 255 | WP_169862687.1 | plasmid stabilization protein | Antitoxin Detail |
| HH800_RS23300 () | 4842617..4843039 | + | 423 | WP_169862708.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| HH800_RS23305 () | 4843321..4843488 | + | 168 | WP_169862710.1 | hypothetical protein | - |
| HH800_RS23310 () | 4843623..4844063 | + | 441 | WP_169862711.1 | hypothetical protein | - |
| HH800_RS23315 () | 4844636..4844962 | + | 327 | WP_041535876.1 | DUF736 domain-containing protein | - |
| HH800_RS23320 () | 4845270..4845536 | + | 267 | WP_128779061.1 | helix-turn-helix transcriptional regulator | - |
| HH800_RS23325 () | 4845633..4845893 | + | 261 | WP_169862713.1 | DUF2285 domain-containing protein | - |
| HH800_RS23330 () | 4846186..4846785 | + | 600 | WP_206379186.1 | DUF2285 domain-containing protein | - |
| HH800_RS23335 () | 4846921..4847202 | + | 282 | WP_169862717.1 | helix-turn-helix domain-containing protein | - |
| HH800_RS23340 () | 4847221..4848381 | + | 1161 | WP_169862719.1 | replication initiator protein A | - |
| HH800_RS23345 () | 4848378..4849031 | + | 654 | WP_169862721.1 | Iron-sulfur cluster carrier protein | VF |
| HH800_RS23350 () | 4849028..4849279 | + | 252 | WP_047820995.1 | hypothetical protein | - |
| HH800_RS23355 () | 4849276..4849797 | + | 522 | WP_169862723.1 | DUF2840 domain-containing protein | - |
| HH800_RS23360 () | 4849821..4850339 | + | 519 | WP_206379253.1 | S26 family signal peptidase | - |
| HH800_RS23365 () | 4850407..4850754 | + | 348 | WP_169862726.1 | DUF736 domain-containing protein | - |
| HH800_RS23370 () | 4850824..4851537 | + | 714 | WP_206379254.1 | Membrane-bound lytic murein transglycosylase C | VF |
| HH800_RS23375 () | 4851781..4853520 | + | 1740 | WP_169862730.1 | VirD2 family relaxase/mobilization nuclease | - |
| HH800_RS23380 () | 4853547..4854893 | + | 1347 | Protein_4603 | hypothetical protein | VF |
| HH800_RS23385 () | 4854883..4855431 | - | 549 | Protein_4604 | integrase arm-type DNA-binding domain-containing protein | - |
| HH800_RS23390 () | 4855750..4857321 | - | 1572 | WP_017499169.1 | glutamine-hydrolyzing GMP synthase | - |
| HH800_RS23395 () | 4857504..4858739 | - | 1236 | WP_169862732.1 | TCR/Tet family MFS transporter | - |
| HH800_RS23400 () | 4858884..4859057 | + | 174 | WP_169862734.1 | hypothetical protein | - |
| HH800_RS23405 () | 4859297..4860208 | + | 912 | WP_169862735.1 | dienelactone hydrolase family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|