MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 45504 bp
Accession: NZ_CP052936 Location: 612958..658461 Organism: Lacticaseibacillus paracasei strain CLP-C10 Replicon: chromosome
Accession: NZ_CP052936 Location: 612958..658461 Organism: Lacticaseibacillus paracasei strain CLP-C10 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HKJ34_RS02885 (HKJ34_02955) | 608206..609027 | + | 822 | WP_016376169.1 | 1,4-dihydroxy-2-naphthoyl-CoA synthase | - |
| HKJ34_RS02890 (HKJ34_02960) | 609037..610461 | + | 1425 | WP_273646880.1 | o-succinylbenzoate--CoA ligase | - |
| HKJ34_RS02895 (HKJ34_02965) | 610508..611701 | + | 1194 | WP_076653778.1 | MFS transporter | - |
| HKJ34_RS02900 (HKJ34_02970) | 611803..612051 | - | 249 | Protein_575 | IS30 family transposase | - |
| HKJ34_RS02905 (HKJ34_02975) | 612186..613610 | + | 1425 | WP_144182126.1 | IS5-like element ISLrh3 family transposase | - |
| HKJ34_RS02910 (HKJ34_02980) | 613766..615031 | + | 1266 | WP_273646881.1 | hypothetical protein | - |
| HKJ34_RS02915 (HKJ34_02985) | 614997..615926 | - | 930 | WP_273646882.1 | IS30 family transposase ISLpl1 | Transposase |
| HKJ34_RS02920 (HKJ34_02990) | 616103..616582 | + | 480 | WP_273646883.1 | hypothetical protein | - |
| HKJ34_RS02925 (HKJ34_02995) | 616655..616906 | + | 252 | WP_002816285.1 | IS3 family transposase IS153 | Transposase |
| HKJ34_RS02930 (HKJ34_03000) | 616924..617802 | + | 879 | WP_257710655.1 | IS3 family transposase ISBce13 | Transposase |
| HKJ34_RS02935 (HKJ34_03005) | 617862..618041 | + | 180 | WP_273646884.1 | hypothetical protein | - |
| HKJ34_RS02940 (HKJ34_03010) | 618118..618639 | + | 522 | WP_016366579.1 | hypothetical protein | - |
| HKJ34_RS02945 (HKJ34_03015) | 618799..619797 | + | 999 | WP_128538125.1 | IS30 family transposase ISApl1 | Transposase |
| HKJ34_RS02950 (HKJ34_03020) | 619969..620892 | - | 924 | WP_273646885.1 | conjugal transfer protein | - |
| HKJ34_RS02955 (HKJ34_03025) | 620889..621422 | - | 534 | WP_076652523.1 | hypothetical protein | - |
| HKJ34_RS02960 (HKJ34_03030) | 621432..622427 | - | 996 | WP_144182129.1 | putative endopeptidase p60 | VF |
| HKJ34_RS02965 (HKJ34_03035) | 622424..624517 | - | 2094 | WP_273646886.1 | conjugal transfer protein | - |
| HKJ34_RS02970 (HKJ34_03040) | 624504..626969 | - | 2466 | WP_016387580.1 | ATP-binding protein | - |
| HKJ34_RS02975 (HKJ34_03045) | 626953..627345 | - | 393 | WP_010491186.1 | conjugal transfer protein | - |
| HKJ34_RS02980 (HKJ34_03050) | 627407..627904 | - | 498 | WP_144182131.1 | antirestriction protein ArdA | - |
| HKJ34_RS02985 (HKJ34_03055) | 627908..628129 | - | 222 | WP_003606383.1 | hypothetical protein | - |
| HKJ34_RS02990 (HKJ34_03060) | 628285..628963 | - | 679 | Protein_593 | site-specific DNA-methyltransferase | - |
| HKJ34_RS02995 (HKJ34_03065) | 629094..629420 | - | 327 | WP_010491196.1 | hypothetical protein | - |
| HKJ34_RS03000 (HKJ34_03070) | 629410..630599 | - | 1190 | Protein_595 | XRE family transcriptional regulator | - |
| HKJ34_RS03005 (HKJ34_03075) | 630915..631175 | - | 261 | WP_273646887.1 | hypothetical protein | - |
| HKJ34_RS03010 (HKJ34_03080) | 631172..631447 | - | 276 | WP_019898231.1 | hypothetical protein | - |
| HKJ34_RS03015 (HKJ34_03085) | 631458..632825 | - | 1368 | WP_144182134.1 | FtsK/SpoIIIE domain-containing protein | - |
| HKJ34_RS03020 (HKJ34_03090) | 632822..633109 | - | 288 | WP_273646888.1 | hypothetical protein | - |
| HKJ34_RS03025 (HKJ34_03095) | 633129..633377 | - | 249 | WP_144182135.1 | hypothetical protein | - |
| HKJ34_RS03030 (HKJ34_03100) | 633412..633669 | - | 258 | WP_273646889.1 | hypothetical protein | - |
| HKJ34_RS03035 (HKJ34_03105) | 633662..633925 | - | 264 | WP_016387575.1 | hypothetical protein | - |
| HKJ34_RS03040 (HKJ34_03110) | 634003..634374 | - | 372 | WP_010491213.1 | YdcP family protein | - |
| HKJ34_RS03045 (HKJ34_03115) | 634392..634715 | - | 324 | WP_016376174.1 | DUF961 family protein | - |
| HKJ34_RS03050 (HKJ34_03120) | 634757..634999 | - | 243 | WP_019898235.1 | hypothetical protein | - |
| HKJ34_RS03055 | 635001..636542 | - | 1542 | WP_225424982.1 | LPXTG cell wall anchor domain-containing protein | - |
| HKJ34_RS03060 | 636494..638794 | - | 2301 | WP_273646890.1 | hypothetical protein | VF |
| HKJ34_RS03065 (HKJ34_03130) | 639499..639927 | - | 429 | WP_003567685.1 | hypothetical protein | - |
| HKJ34_RS03070 (HKJ34_03135) | 640027..640704 | + | 678 | WP_003567683.1 | hypothetical protein | - |
| HKJ34_RS03075 (HKJ34_03140) | 640701..641348 | - | 648 | WP_003571475.1 | hypothetical protein | - |
| HKJ34_RS03080 (HKJ34_03150) | 641728..642492 | + | 765 | WP_003581098.1 | hypothetical protein | - |
| HKJ34_RS03085 (HKJ34_03155) | 642553..643941 | + | 1389 | WP_003581096.1 | UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase | - |
| HKJ34_RS03090 (HKJ34_03160) | 643972..644115 | + | 144 | WP_016380391.1 | hypothetical protein | - |
| HKJ34_RS03095 (HKJ34_03165) | 644241..645749 | + | 1509 | WP_003567670.1 | DEAD/DEAH box helicase | - |
| HKJ34_RS03100 (HKJ34_03170) | 645918..646292 | + | 375 | WP_003567669.1 | holo-ACP synthase | - |
| HKJ34_RS03105 (HKJ34_03175) | 646279..647415 | + | 1137 | WP_003581082.1 | alanine racemase | - |
| HKJ34_RS03110 (HKJ34_03180) | 647483..647731 | + | 249 | WP_003567665.1 | antitoxin | Antitoxin Detail |
| HKJ34_RS03115 (HKJ34_03185) | 647751..648134 | + | 384 | WP_003567661.1 | type II toxin-antitoxin system PemK/MazF family toxin | Toxin Detail |
| HKJ34_RS03120 (HKJ34_03190) | 648318..648839 | + | 522 | WP_003567657.1 | QueT transporter family protein | - |
| HKJ34_RS03125 (HKJ34_03195) | 649113..653570 | + | 4458 | WP_003581075.1 | glutamate synthase large subunit | - |
| HKJ34_RS03130 (HKJ34_03200) | 653706..655139 | + | 1434 | WP_003567654.1 | glutamate synthase subunit beta | - |
| HKJ34_RS03135 (HKJ34_03205) | 655268..655972 | - | 705 | WP_003567652.1 | L,D-transpeptidase | - |
| HKJ34_RS03140 (HKJ34_03210) | 656248..656913 | - | 666 | WP_003567650.1 | cyclic di-AMP binding protein CbpA | - |
| HKJ34_RS03145 (HKJ34_03220) | 657415..658785 | - | 1371 | WP_003571470.1 | L,D-transpeptidase family protein | - |
| HKJ34_RS03150 (HKJ34_03225) | 659196..660203 | - | 1008 | WP_003662706.1 | L-lactate dehydrogenase | - |
| HKJ34_RS03155 (HKJ34_03230) | 660846..661403 | + | 558 | WP_003567642.1 | aminoacyl-tRNA hydrolase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|