MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 93854 bp
Accession: NZ_CP052881 Location: 1..93854 Organism: Escherichia coli strain C21 Replicon: plasmid pC21-4
Accession: NZ_CP052881 Location: 1..93854 Organism: Escherichia coli strain C21 Replicon: plasmid pC21-4
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HJD21_RS23910 () | 1..885 | + | 885 | WP_001113742.1 | RepB family plasmid replication initiator protein | - |
| HJD21_RS23915 () | 1178..1987 | + | 810 | Protein_1 | GIY-YIG nuclease family protein | - |
| HJD21_RS23920 () | 2156..3352 | + | 1197 | WP_001285362.1 | AAA family ATPase | - |
| HJD21_RS23925 () | 3369..4370 | + | 1002 | WP_000038866.1 | ParB/RepB/Spo0J family partition protein | - |
| HJD21_RS23930 () | 4596..6302 | + | 1707 | WP_000067710.1 | hypothetical protein | - |
| HJD21_RS23935 () | 6363..7952 | + | 1590 | WP_023156142.1 | hypothetical protein | - |
| HJD21_RS23940 () | 7962..8777 | + | 816 | WP_124842093.1 | hypothetical protein | - |
| HJD21_RS23945 () | 8813..9394 | + | 582 | WP_000035301.1 | hypothetical protein | - |
| HJD21_RS23950 () | 9406..9915 | + | 510 | WP_000509939.1 | hypothetical protein | - |
| HJD21_RS23955 () | 10032..10187 | - | 156 | WP_001313475.1 | type I toxin-antitoxin system toxin HokD | - |
| HJD21_RS23960 () | 10369..10614 | - | 246 | WP_029401368.1 | hypothetical protein | - |
| HJD21_RS23965 () | 10665..11510 | - | 846 | WP_001379176.1 | hypothetical protein | - |
| HJD21_RS23970 () | 11540..12340 | - | 801 | WP_001187876.1 | phage antirepressor KilAC domain-containing protein | - |
| HJD21_RS23975 () | 12504..13547 | - | 1044 | WP_000743164.1 | phage antirepressor Ant | - |
| HJD21_RS23980 () | 13522..13764 | - | 243 | WP_169711502.1 | host cell division inhibitor Icd-like protein | - |
| HJD21_RS23985 () | 14386..14897 | + | 512 | Protein_15 | hypothetical protein | - |
| HJD21_RS23990 () | 14901..15440 | + | 540 | WP_001033469.1 | DUF5384 family protein | - |
| HJD21_RS23995 () | 15521..16086 | + | 566 | Protein_17 | hypothetical protein | - |
| HJD21_RS24000 () | 16097..16708 | + | 612 | WP_000523978.1 | hypothetical protein | - |
| HJD21_RS24005 () | 16723..17583 | + | 861 | Protein_19 | morphogenetic protein | - |
| HJD21_RS24010 () | 17685..21078 | + | 3394 | Protein_20 | lytic transglycosylase domain-containing protein | - |
| HJD21_RS24015 () | 21078..21434 | + | 357 | WP_000002800.1 | hypothetical protein | - |
| HJD21_RS24020 () | 21431..22863 | + | 1433 | Protein_22 | bleomycin hydrolase | - |
| HJD21_RS24025 () | 22863..23699 | + | 837 | WP_001189838.1 | hypothetical protein | - |
| HJD21_RS24030 () | 23778..24212 | + | 435 | WP_001286326.1 | hypothetical protein | - |
| HJD21_RS24035 () | 24224..25776 | + | 1553 | Protein_25 | tail fiber protein | - |
| HJD21_RS24040 () | 26053..27243 | + | 1191 | WP_072658107.1 | phage tail protein | - |
| HJD21_RS24045 () | 27243..27821 | + | 579 | WP_063117167.1 | tail fiber assembly protein | - |
| HJD21_RS24050 () | 27865..28437 | - | 573 | WP_124842119.1 | serine O-acetyltransferase | - |
| HJD21_RS24055 () | 28926..29459 | - | 534 | WP_024235795.1 | tail fiber assembly protein | - |
| HJD21_RS24060 () | 29462..30763 | - | 1302 | WP_169711504.1 | phage tail protein | - |
| HJD21_RS24065 () | 31030..31590 | - | 561 | WP_029401675.1 | Tn3 family transposase TnpR_ISPa38 | Transposase |
| HJD21_RS24070 () | 31718..31999 | + | 282 | WP_000332810.1 | hypothetical protein | - |
| HJD21_RS24075 () | 32067..32396 | + | 330 | WP_000887652.1 | holin | - |
| HJD21_RS24080 () | 32393..32836 | + | 444 | WP_000580776.1 | hypothetical protein | - |
| HJD21_RS24085 () | 32823..33425 | + | 603 | WP_001369351.1 | hypothetical protein | - |
| HJD21_RS24090 () | 33427..35346 | + | 1920 | WP_047649461.1 | hypothetical protein | - |
| HJD21_RS24095 () | 35343..35708 | + | 366 | WP_029401678.1 | hypothetical protein | - |
| HJD21_RS24100 () | 35721..38708 | + | 2988 | WP_063117182.1 | hypothetical protein | - |
| HJD21_RS24105 () | 38698..39009 | + | 312 | WP_001165932.1 | hypothetical protein | - |
| HJD21_RS24110 () | 39752..40864 | + | 1113 | WP_000724558.1 | porin OmpC | - |
| HJD21_RS24115 () | 41098..41586 | - | 489 | WP_000068862.1 | single-stranded DNA-binding protein | - |
| HJD21_RS24120 () | 41756..42313 | + | 558 | WP_001345478.1 | lysozyme | - |
| HJD21_RS24125 () | 42605..43625 | - | 1021 | Protein_43 | head processing protein | - |
| HJD21_RS24130 () | 43618..45357 | - | 1740 | WP_169711503.1 | phage portal protein | - |
| HJD21_RS24135 () | 45404..46256 | + | 853 | Protein_45 | SAM-dependent DNA methyltransferase | - |
| HJD21_RS24140 () | 46680..52172 | + | 5493 | WP_169711505.1 | helicase | - |
| HJD21_RS24145 () | 52206..52646 | + | 441 | WP_000224043.1 | hypothetical protein | - |
| HJD21_RS24150 () | 52643..52891 | + | 249 | WP_000747846.1 | hypothetical protein | - |
| HJD21_RS24155 () | 52974..53984 | + | 1011 | WP_016246528.1 | DUF2971 domain-containing protein | - |
| HJD21_RS24160 () | 54082..54834 | - | 753 | WP_072104142.1 | hypothetical protein | - |
| HJD21_RS24165 () | 55317..55538 | + | 222 | WP_012817933.1 | host cell division inhibitor Icd-like protein | - |
| HJD21_RS24170 () | 55535..56650 | + | 1116 | WP_001260622.1 | phage antirepressor Ant | - |
| HJD21_RS24175 () | 56889..57200 | - | 312 | WP_001224234.1 | hypothetical protein | - |
| HJD21_RS24180 () | 57251..58282 | - | 1032 | WP_029396411.1 | site-specific integrase | - |
| HJD21_RS24185 () | 58290..58511 | - | 222 | WP_000542332.1 | hypothetical protein | - |
| HJD21_RS24190 () | 59116..59325 | + | 210 | WP_032305379.1 | hypothetical protein | - |
| HJD21_RS24195 () | 59436..60287 | + | 852 | WP_029401409.1 | hypothetical protein | - |
| HJD21_RS24200 () | 60312..61796 | - | 1485 | WP_000124150.1 | terminase | - |
| HJD21_RS24205 () | 61796..62989 | - | 1194 | WP_000219604.1 | terminase | - |
| HJD21_RS24210 () | 63076..63528 | - | 453 | WP_032305380.1 | hypothetical protein | - |
| HJD21_RS24215 () | 63617..64660 | - | 1044 | WP_000648833.1 | DUF968 domain-containing protein | - |
| HJD21_RS24220 () | 64688..64867 | - | 180 | WP_000113018.1 | hypothetical protein | - |
| HJD21_RS24225 () | 64872..65252 | - | 381 | WP_001216030.1 | type II toxin-antitoxin system death-on-curing family toxin | Toxin Detail |
| HJD21_RS24230 () | 65252..65473 | - | 222 | WP_001190712.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| HJD21_RS24235 () | 65656..67212 | + | 1557 | WP_029401414.1 | type I restriction-modification system subunit M | - |
| HJD21_RS24240 () | 67209..68477 | + | 1269 | WP_029401415.1 | restriction endonuclease subunit S | - |
| HJD21_RS24245 () | 68599..71715 | + | 3117 | WP_029401417.1 | HsdR family type I site-specific deoxyribonuclease | - |
| HJD21_RS24250 () | 71980..72486 | - | 507 | WP_029401419.1 | hypothetical protein | - |
| HJD21_RS24255 () | 72559..73821 | - | 1263 | WP_029401421.1 | hypothetical protein | - |
| HJD21_RS24260 () | 74123..74824 | - | 702 | WP_000684869.1 | hypothetical protein | - |
| HJD21_RS24265 () | 74821..75498 | - | 678 | WP_024262884.1 | metallophosphoesterase | - |
| HJD21_RS24270 () | 75495..76121 | - | 627 | WP_000484111.1 | norphogenetic protein | - |
| HJD21_RS24275 () | 76019..76681 | - | 663 | WP_032288828.1 | hypothetical protein | - |
| HJD21_RS24280 () | 76623..76778 | - | 156 | WP_000095380.1 | hypothetical protein | - |
| HJD21_RS24285 () | 76845..77423 | - | 579 | WP_029401427.1 | VRR-NUC domain-containing protein | - |
| HJD21_RS24290 () | 77426..77671 | - | 246 | WP_000840930.1 | hypothetical protein | - |
| HJD21_RS24295 () | 77818..78195 | + | 378 | WP_000235786.1 | hypothetical protein | - |
| HJD21_RS24300 () | 78205..79422 | + | 1218 | WP_001141901.1 | hypothetical protein | - |
| HJD21_RS24305 () | 79426..80154 | + | 729 | WP_000896801.1 | hypothetical protein | - |
| HJD21_RS24310 () | 80141..80926 | + | 786 | WP_029401429.1 | hypothetical protein | - |
| HJD21_RS24315 () | 80928..81944 | + | 1017 | WP_000212018.1 | hypothetical protein | - |
| HJD21_RS24320 () | 81937..82569 | + | 633 | WP_000535202.1 | baseplate protein | - |
| HJD21_RS24325 () | 82616..83614 | - | 999 | WP_001198667.1 | hypothetical protein | - |
| HJD21_RS24330 () | 83614..84978 | - | 1365 | WP_001276602.1 | replicative DNA helicase | - |
| HJD21_RS24340 () | 85450..85614 | - | 165 | WP_000234829.1 | DUF3927 family protein | - |
| HJD21_RS24345 () | 85614..86039 | - | 426 | WP_000900640.1 | tellurite/colicin resistance protein | - |
| HJD21_RS24360 () | 87793..90057 | - | 2265 | WP_124842104.1 | Dam family site-specific DNA-(adenine-N6)-methyltransferase | - |
| HJD21_RS24365 () | 90054..90959 | - | 906 | WP_000472526.1 | recombination-associated protein RdgC | - |
| HJD21_RS24370 () | 90952..91236 | - | 285 | WP_001177860.1 | hypothetical protein | - |
| HJD21_RS24375 () | 91699..92487 | + | 789 | WP_029401362.1 | hypothetical protein | - |
| HJD21_RS24380 () | 92527..92949 | + | 423 | WP_001514466.1 | hypothetical protein | - |
| HJD21_RS24385 () | 93127..93519 | + | 393 | WP_029401364.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|