MGE detailed information
MGE type: Mobilizable plasmid MGE length: 63878 bp
Accession: NZ_CP052878 Location: 1..63878 Organism: Escherichia coli strain C21 Replicon: plasmid pC21-1
Accession: NZ_CP052878 Location: 1..63878 Organism: Escherichia coli strain C21 Replicon: plasmid pC21-1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HJD21_RS22660 () | 496..1524 | + | 1029 | WP_024172575.1 | replication initiation protein | - |
| HJD21_RS22665 () | 2928..3089 | + | 162 | WP_001434039.1 | type I toxin-antitoxin system Hok family toxin | - |
| HJD21_RS22670 () | 3238..3834 | + | 597 | WP_000125165.1 | hypothetical protein | - |
| HJD21_RS24445 () | 3852..4136 | - | 285 | WP_001162371.1 | hypothetical protein | - |
| HJD21_RS22680 () | 4210..4875 | - | 666 | WP_015387337.1 | P-loop NTPase | - |
| HJD21_RS22685 () | 5462..5791 | + | 330 | WP_000855119.1 | hypothetical protein | - |
| HJD21_RS22690 () | 6195..6710 | + | 516 | WP_001025393.1 | J domain-containing protein | - |
| HJD21_RS22695 () | 6814..7356 | + | 543 | WP_001083904.1 | hypothetical protein | - |
| HJD21_RS22700 () | 7353..7607 | + | 255 | WP_001230709.1 | hypothetical protein | Toxin Detail |
| HJD21_RS22705 () | 7604..7846 | + | 243 | WP_000151456.1 | hypothetical protein | Antitoxin Detail |
| HJD21_RS22710 () | 7983..8315 | + | 333 | WP_001393253.1 | WbuC family cupin fold metalloprotein | - |
| HJD21_RS22715 () | 8362..9237 | - | 876 | WP_015387340.1 | Beta-lactamase CTX-M-1 | ARG |
| HJD21_RS22720 () | 9490..9654 | - | 165 | Protein_12 | transposase | - |
| HJD21_RS22725 () | 9827..11026 | - | 1200 | WP_000948429.1 | IS91 family transposase ISSbo1 | Transposase |
| HJD21_RS22730 () | 11036..11224 | - | 189 | WP_000957857.1 | hypothetical protein | - |
| HJD21_RS22735 () | 11346..12440 | - | 1095 | Protein_15 | IS1380 family transposase ISEcp1 | Transposase |
| HJD21_RS22740 () | 12825..13074 | + | 250 | Protein_16 | hypothetical protein | - |
| HJD21_RS22745 () | 13190..13477 | + | 288 | WP_000673430.1 | hypothetical protein | - |
| HJD21_RS22750 () | 13487..13903 | + | 417 | WP_053882499.1 | phage tail protein | - |
| HJD21_RS22755 () | 13900..14211 | + | 312 | WP_001310436.1 | hypothetical protein | - |
| HJD21_RS22760 () | 14633..14815 | - | 183 | WP_001401700.1 | hypothetical protein | - |
| HJD21_RS22765 () | 15373..15555 | + | 183 | WP_000833470.1 | type II toxin-antitoxin system HicA family toxin | - |
| HJD21_RS22770 () | 15580..16017 | + | 438 | WP_000466318.1 | type II toxin-antitoxin system HicB family antitoxin | - |
| HJD21_RS22775 () | 16148..16468 | - | 321 | WP_001310435.1 | hypothetical protein | - |
| HJD21_RS22780 () | 16802..16980 | - | 179 | Protein_24 | hypothetical protein | - |
| HJD21_RS22785 () | 17017..17280 | - | 264 | WP_000224227.1 | hypothetical protein | - |
| HJD21_RS22790 () | 17282..17701 | - | 420 | WP_001708405.1 | hypothetical protein | - |
| HJD21_RS22795 () | 17721..18428 | - | 708 | WP_000108796.1 | hypothetical protein | - |
| HJD21_RS22800 () | 18430..19182 | - | 753 | WP_000797966.1 | conjugal transfer protein TraL | - |
| HJD21_RS22805 () | 19200..19601 | - | 402 | WP_000717860.1 | hypothetical protein | - |
| HJD21_RS22810 () | 19970..20311 | + | 342 | WP_000730722.1 | hypothetical protein | Relaxase |
| HJD21_RS22815 () | 20308..24513 | + | 4206 | WP_015387342.1 | hypothetical protein | - |
| HJD21_RS22820 () | 24556..24996 | - | 441 | WP_015387343.1 | hypothetical protein | - |
| HJD21_RS22825 () | 25241..25483 | - | 243 | WP_001356704.1 | hypothetical protein | - |
| HJD21_RS22830 () | 25818..26024 | - | 207 | WP_000850854.1 | hemolysin expression modulator Hha | - |
| HJD21_RS22835 () | 26487..26693 | - | 207 | WP_021563360.1 | hypothetical protein | - |
| HJD21_RS22840 () | 26937..29093 | - | 2157 | WP_000765172.1 | type IA DNA topoisomerase | - |
| HJD21_RS22845 () | 29105..29692 | - | 588 | WP_015387347.1 | hypothetical protein | - |
| HJD21_RS22850 () | 30056..30460 | - | 405 | WP_001218543.1 | hypothetical protein | - |
| HJD21_RS22855 () | 30476..30994 | - | 519 | WP_000698399.1 | thermonuclease family protein | - |
| HJD21_RS22860 () | 31041..31694 | - | 654 | WP_015387348.1 | hypothetical protein | - |
| HJD21_RS22865 () | 31706..32830 | - | 1125 | WP_000486719.1 | site-specific integrase | - |
| HJD21_RS22875 () | 33687..35061 | - | 1375 | Protein_42 | hypothetical protein | VF |
| HJD21_RS22880 () | 35074..35709 | - | 636 | WP_000934978.1 | Type 4 prepilin-like proteins leader peptide-processing enzyme | VF |
| HJD21_RS22885 () | 35713..36195 | - | 483 | WP_001258095.1 | hypothetical protein | VF |
| HJD21_RS22890 () | 36262..36819 | - | 558 | WP_000095051.1 | hypothetical protein | - |
| HJD21_RS22895 () | 36864..37973 | - | 1110 | WP_000974900.1 | Toxin coregulated pilus biosynthesis protein E | VF |
| HJD21_RS22900 () | 37964..39502 | - | 1539 | WP_001420475.1 | Type II secretion system protein E | VF |
| HJD21_RS22905 () | 39527..40021 | - | 495 | WP_000912551.1 | type IV pilus biogenesis protein PilP | - |
| HJD21_RS22910 () | 40005..41327 | - | 1323 | WP_000454143.1 | type 4b pilus protein PilO2 | - |
| HJD21_RS22915 () | 41366..43009 | - | 1644 | WP_001035590.1 | Outer membrane lipoprotein BfpB | VF |
| HJD21_RS22920 () | 43002..43520 | - | 519 | WP_015387353.1 | YfdA protein | - |
| HJD21_RS22925 () | 43567..45525 | - | 1959 | WP_000338974.1 | type IV secretory system conjugative DNA transfer family protein | - |
| HJD21_RS22930 () | 45541..46596 | - | 1056 | WP_001059977.1 | Type IV secretion system protein VirB11 | VF |
| HJD21_RS22935 () | 46615..47754 | - | 1140 | WP_015387354.1 | Type IV secretion system protein virB10 | VF |
| HJD21_RS22940 () | 47744..48445 | - | 702 | WP_053882504.1 | Type IV secretion system protein PtlF | VF |
| HJD21_RS22945 () | 48511..49245 | - | 735 | WP_000432282.1 | Type IV secretion system protein virB8 | VF |
| HJD21_RS22950 () | 49409..51766 | - | 2358 | WP_015387356.1 | VirB4 family type IV secretion system protein | - |
| HJD21_RS22955 () | 51772..52092 | - | 321 | WP_000362081.1 | VirB3 family type IV secretion system protein | - |
| HJD21_RS22960 () | 52163..52351 | - | 189 | WP_050567133.1 | hypothetical protein | - |
| HJD21_RS22965 () | 52453..53037 | - | 585 | WP_001401693.1 | Type IV secretion system protein virB1 | VF |
| HJD21_RS22970 () | 53058..53456 | - | 399 | WP_001708012.1 | hypothetical protein | - |
| HJD21_RS22975 () | 53796..54233 | - | 438 | WP_015387358.1 | type IV pilus biogenesis protein PilM | - |
| HJD21_RS22980 () | 54239..55474 | - | 1236 | WP_001419735.1 | hypothetical protein | VF |
| HJD21_RS22985 () | 55477..55776 | - | 300 | WP_000835763.1 | IncN plasmid KikA protein | - |
| HJD21_RS22990 () | 55843..56475 | - | 633 | WP_001419736.1 | hypothetical protein | - |
| HJD21_RS22995 () | 56523..57332 | + | 810 | WP_001419737.1 | hypothetical protein | - |
| HJD21_RS23000 () | 57379..57615 | - | 237 | WP_000750964.1 | EexN family lipoprotein | - |
| HJD21_RS23005 () | 57619..58266 | - | 648 | WP_001419738.1 | hypothetical protein | VF |
| HJD21_RS23010 () | 58272..59258 | - | 987 | WP_001419739.1 | type IV secretion system protein | - |
| HJD21_RS23015 () | 59262..59519 | - | 258 | WP_000739144.1 | hypothetical protein | - |
| HJD21_RS23020 () | 59516..59818 | - | 303 | WP_001360345.1 | hypothetical protein | - |
| HJD21_RS23025 () | 59834..60049 | - | 216 | WP_001360344.1 | hypothetical protein | - |
| HJD21_RS23030 () | 60233..60895 | - | 663 | WP_001419740.1 | hypothetical protein | - |
| HJD21_RS23035 () | 60906..61076 | - | 171 | WP_000550721.1 | hypothetical protein | - |
| HJD21_RS23040 () | 61080..61523 | - | 444 | WP_000964840.1 | NfeD family protein | - |
| HJD21_RS23045 () | 61596..62549 | - | 954 | WP_072105959.1 | SPFH/Band 7/PHB domain protein | - |
| HJD21_RS23050 () | 62595..62789 | - | 195 | WP_000049865.1 | DUF1187 family protein | - |
| HJD21_RS23055 () | 62782..63288 | - | 507 | WP_001358485.1 | CaiF/GrlA family transcriptional regulator | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|