MGE detailed information
MGE type: Prophage MGE length: 47732 bp
Accession: NZ_CP052855 Location: 473940..521671 Organism: Xylella fastidiosa subsp. multiplex strain Fillmore Replicon: chromosome
Accession: NZ_CP052855 Location: 473940..521671 Organism: Xylella fastidiosa subsp. multiplex strain Fillmore Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HKJ31_RS01965 () | 469443..470102 | - | 660 | WP_004085204.1 | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | - |
| HKJ31_RS01970 () | 470199..472115 | - | 1917 | WP_004085203.1 | phosphogluconate dehydratase | - |
| HKJ31_RS01975 () | 472214..472933 | - | 720 | WP_004085202.1 | 6-phosphogluconolactonase | - |
| HKJ31_RS01980 () | 472930..473943 | - | 1014 | WP_004085201.1 | glucokinase | - |
| HKJ31_RS01985 () | 473940..475373 | - | 1434 | WP_021358465.1 | glucose-6-phosphate dehydrogenase | - |
| HKJ31_RS01990 () | 475702..476796 | + | 1095 | WP_012337631.1 | Vitamin B12 import ATP-binding protein BtuD | VF |
| HKJ31_RS01995 () | 476941..477744 | - | 804 | WP_004085198.1 | folate-binding protein YgfZ | - |
| HKJ31_RS02000 () | 478057..478275 | + | 219 | WP_004085343.1 | DUF1674 domain-containing protein | - |
| HKJ31_RS02005 () | 478333..478755 | + | 423 | WP_021358463.1 | succinate dehydrogenase, cytochrome b556 subunit | - |
| HKJ31_RS02010 () | 478752..479135 | + | 384 | WP_004085197.1 | succinate dehydrogenase, hydrophobic membrane anchor protein | - |
| HKJ31_RS02015 () | 479143..480933 | + | 1791 | WP_004085196.1 | succinate dehydrogenase flavoprotein subunit | - |
| HKJ31_RS02020 () | 480954..481739 | + | 786 | WP_004085195.1 | succinate dehydrogenase iron-sulfur subunit | - |
| HKJ31_RS02025 () | 481860..482108 | + | 249 | WP_004085194.1 | succinate dehydrogenase assembly factor 2 | - |
| HKJ31_RS02030 () | 482131..482511 | + | 381 | WP_012337633.1 | hypothetical protein | - |
| HKJ31_RS02035 () | 482537..483778 | + | 1242 | WP_004085192.1 | lipoprotein-releasing ABC transporter permease subunit | - |
| HKJ31_RS02040 () | 483771..484493 | + | 723 | WP_004085191.1 | Vitamin B12 import ATP-binding protein BtuD | VF |
| HKJ31_RS02045 () | 484841..487318 | + | 2478 | WP_012337634.1 | DNA internalization-related competence protein ComEC/Rec2 | - |
| HKJ31_RS02050 () | 487303..487965 | + | 663 | WP_004085189.1 | MotA/TolQ/ExbB proton channel family protein | - |
| HKJ31_RS02055 () | 487970..488407 | + | 438 | WP_004089267.1 | biopolymer transporter ExbD | - |
| HKJ31_RS02060 () | 488425..490173 | + | 1749 | WP_004085187.1 | Vitamin B12 import ATP-binding protein BtuD | VF |
| HKJ31_RS02065 () | 490170..491189 | + | 1020 | WP_004085186.1 | Tetraacyldisaccharide 4'-kinase | VF |
| HKJ31_RS02070 () | 491564..492646 | - | 1083 | WP_169710284.1 | phage late control D family protein | - |
| HKJ31_RS02075 () | 492637..492855 | - | 219 | WP_040123123.1 | tail protein X | - |
| HKJ31_RS02080 () | 492852..493334 | - | 483 | WP_169710282.1 | phage tail protein | - |
| HKJ31_RS02085 () | 493331..495544 | - | 2214 | WP_169710408.1 | phage tail tape measure protein | - |
| HKJ31_RS02090 () | 495671..495958 | - | 288 | WP_169710280.1 | phage tail assembly protein | - |
| HKJ31_RS02095 () | 495961..496470 | - | 510 | WP_004085181.1 | phage major tail tube protein | - |
| HKJ31_RS02100 () | 496470..497647 | - | 1178 | Protein_402 | phage tail sheath family protein | - |
| HKJ31_RS02105 () | 497712..499304 | - | 1593 | WP_169710278.1 | tail fiber domain-containing protein | - |
| HKJ31_RS02110 () | 499312..499869 | - | 558 | WP_004086970.1 | phage tail protein I | - |
| HKJ31_RS02115 () | 499862..500755 | - | 894 | WP_154128227.1 | baseplate J/gp47 family protein | - |
| HKJ31_RS02120 () | 500755..501093 | - | 339 | WP_004085176.1 | GPW/gp25 family protein | - |
| HKJ31_RS02125 () | 501227..501541 | + | 315 | WP_004087029.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| HKJ31_RS02130 () | 501543..501824 | + | 282 | WP_004087027.1 | XRE family transcriptional regulator | - |
| HKJ31_RS02135 () | 501836..502135 | + | 300 | WP_004087025.1 | HigA family addiction module antidote protein | - |
| HKJ31_RS02140 () | 502140..502727 | - | 588 | WP_169710296.1 | phage baseplate assembly protein V | - |
| HKJ31_RS02145 () | 502724..503266 | - | 543 | WP_154128253.1 | hypothetical protein | - |
| HKJ31_RS02150 () | 503242..503763 | - | 522 | WP_169710298.1 | hypothetical protein | - |
| HKJ31_RS02155 () | 503760..504083 | - | 324 | WP_154436962.1 | hypothetical protein | - |
| HKJ31_RS02160 () | 504083..504343 | - | 261 | WP_169710299.1 | hypothetical protein | - |
| HKJ31_RS02165 () | 504361..506235 | - | 1875 | WP_004085158.1 | phage major capsid protein | - |
| HKJ31_RS02170 () | 506232..507818 | - | 1587 | WP_004085156.1 | phage portal protein | - |
| HKJ31_RS02175 () | 507815..508366 | - | 552 | WP_038230179.1 | hypothetical protein | - |
| HKJ31_RS02180 () | 508370..510322 | - | 1953 | WP_154128247.1 | phage terminase large subunit family protein | - |
| HKJ31_RS02185 () | 510315..510890 | - | 576 | WP_004086888.1 | terminase small subunit | - |
| HKJ31_RS02190 () | 511021..511245 | - | 225 | WP_169710301.1 | hypothetical protein | - |
| HKJ31_RS02195 () | 511247..511708 | - | 462 | WP_169709972.1 | hypothetical protein | - |
| HKJ31_RS02200 () | 511698..512027 | - | 330 | WP_004085022.1 | phage holin family protein | - |
| HKJ31_RS02205 () | 512020..512520 | - | 501 | WP_169710303.1 | lysozyme | - |
| HKJ31_RS02210 () | 512620..513351 | - | 732 | WP_004085024.1 | site-specific DNA-methyltransferase | - |
| HKJ31_RS02215 () | 513541..513876 | - | 336 | WP_004085025.1 | type II toxin-antitoxin system HicB family antitoxin | Antitoxin Detail |
| HKJ31_RS02220 () | 513873..514127 | - | 255 | WP_004089517.1 | type II toxin-antitoxin system HicA family toxin | Toxin Detail |
| HKJ31_RS02225 () | 514180..514902 | - | 723 | WP_004085026.1 | hypothetical protein | - |
| HKJ31_RS02230 () | 514845..515192 | - | 348 | WP_162010044.1 | hypothetical protein | - |
| HKJ31_RS11305 () | 516049..516648 | + | 600 | WP_162008660.1 | hypothetical protein | - |
| HKJ31_RS02240 () | 516645..516923 | + | 279 | WP_169710305.1 | VRR-NUC domain-containing protein | - |
| HKJ31_RS02245 () | 516925..517329 | - | 405 | WP_004085029.1 | hypothetical protein | - |
| HKJ31_RS02250 () | 517414..518832 | + | 1419 | WP_169710307.1 | DEAD/DEAH box helicase | - |
| HKJ31_RS02255 () | 518829..518993 | + | 165 | WP_004086189.1 | hypothetical protein | - |
| HKJ31_RS02260 () | 518986..519234 | + | 249 | WP_004086191.1 | DUF4224 domain-containing protein | - |
| HKJ31_RS02265 () | 519234..520253 | + | 1020 | WP_169710308.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| HKJ31_RS02270 () | 521030..521671 | + | 642 | WP_004085684.1 | Iron-sulfur cluster carrier protein | VF |
| HKJ31_RS02275 () | 521699..522175 | + | 477 | WP_004085683.1 | histidine phosphatase family protein | - |
| HKJ31_RS02280 () | 522180..522752 | + | 573 | WP_004085682.1 | YceI family protein | - |
| HKJ31_RS02285 () | 522749..524707 | + | 1959 | WP_038231298.1 | phospholipase D family protein | - |
| HKJ31_RS02290 () | 525692..526084 | - | 393 | WP_071869548.1 | helix-turn-helix domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|