MGE detailed information
MGE type: Prophage MGE length: 48814 bp
Accession: NZ_CP052854 Location: 474774..523587 Organism: Xylella fastidiosa subsp. multiplex strain LM10 Replicon: chromosome
Accession: NZ_CP052854 Location: 474774..523587 Organism: Xylella fastidiosa subsp. multiplex strain LM10 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HKJ32_RS01960 () | 470277..470936 | - | 660 | WP_004085204.1 | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | - |
| HKJ32_RS01965 () | 471033..472949 | - | 1917 | WP_004085203.1 | phosphogluconate dehydratase | - |
| HKJ32_RS01970 () | 473048..473767 | - | 720 | WP_004085202.1 | 6-phosphogluconolactonase | - |
| HKJ32_RS01975 () | 473764..474777 | - | 1014 | WP_004085201.1 | glucokinase | - |
| HKJ32_RS01980 () | 474774..476207 | - | 1434 | WP_021358465.1 | glucose-6-phosphate dehydrogenase | - |
| HKJ32_RS01985 () | 476536..477630 | + | 1095 | WP_012337631.1 | sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC | - |
| HKJ32_RS01990 () | 477775..478578 | - | 804 | WP_004085198.1 | folate-binding protein YgfZ | - |
| HKJ32_RS01995 () | 478891..479109 | + | 219 | WP_004085343.1 | DUF1674 domain-containing protein | - |
| HKJ32_RS02000 () | 479167..479589 | + | 423 | WP_021358463.1 | succinate dehydrogenase, cytochrome b556 subunit | - |
| HKJ32_RS02005 () | 479586..479969 | + | 384 | WP_004085197.1 | succinate dehydrogenase, hydrophobic membrane anchor protein | - |
| HKJ32_RS02010 () | 479977..481767 | + | 1791 | WP_004085196.1 | succinate dehydrogenase flavoprotein subunit | - |
| HKJ32_RS02015 () | 481788..482573 | + | 786 | WP_004085195.1 | succinate dehydrogenase iron-sulfur subunit | - |
| HKJ32_RS02020 () | 482694..482942 | + | 249 | WP_004085194.1 | succinate dehydrogenase assembly factor 2 | - |
| HKJ32_RS02025 () | 482965..483345 | + | 381 | WP_012337633.1 | hypothetical protein | - |
| HKJ32_RS02030 () | 483371..484612 | + | 1242 | WP_004085192.1 | lipoprotein-releasing ABC transporter permease subunit | - |
| HKJ32_RS02035 () | 484605..485327 | + | 723 | WP_004085191.1 | lipoprotein-releasing ABC transporter ATP-binding protein LolD | - |
| HKJ32_RS02040 () | 485675..488152 | + | 2478 | WP_012337634.1 | DNA internalization-related competence protein ComEC/Rec2 | - |
| HKJ32_RS02045 () | 488137..488799 | + | 663 | WP_004085189.1 | MotA/TolQ/ExbB proton channel family protein | - |
| HKJ32_RS02050 () | 488804..489241 | + | 438 | WP_004089267.1 | biopolymer transporter ExbD | - |
| HKJ32_RS02055 () | 489259..491007 | + | 1749 | WP_004085187.1 | lipid A export permease/ATP-binding protein MsbA | - |
| HKJ32_RS02060 () | 491004..492023 | + | 1020 | WP_004085186.1 | tetraacyldisaccharide 4'-kinase | - |
| HKJ32_RS02065 () | 492398..493480 | - | 1083 | WP_012337635.1 | phage late control D family protein | - |
| HKJ32_RS02070 () | 493471..493689 | - | 219 | WP_004085341.1 | tail protein X | - |
| HKJ32_RS02075 () | 493686..494168 | - | 483 | WP_012337636.1 | phage tail protein | - |
| HKJ32_RS02080 () | 494165..496384 | - | 2220 | WP_012337637.1 | phage tail tape measure protein | - |
| HKJ32_RS02085 () | 496511..496798 | - | 288 | WP_012337638.1 | phage tail assembly protein | - |
| HKJ32_RS02090 () | 496801..497310 | - | 510 | WP_128283754.1 | phage major tail tube protein | - |
| HKJ32_RS02095 () | 497310..498486 | - | 1177 | Protein_400 | phage tail sheath family protein | - |
| HKJ32_RS02100 () | 498550..500141 | - | 1592 | Protein_401 | tail fiber domain-containing protein | - |
| HKJ32_RS02105 () | 500149..500706 | - | 558 | WP_004086970.1 | phage tail protein I | - |
| HKJ32_RS02110 () | 500699..501590 | - | 892 | Protein_403 | baseplate J/gp47 family protein | - |
| HKJ32_RS02115 () | 501590..501928 | - | 339 | WP_004085176.1 | GPW/gp25 family protein | - |
| HKJ32_RS02120 () | 502062..502376 | + | 315 | WP_004087029.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| HKJ32_RS02125 () | 502378..502659 | + | 282 | WP_004087027.1 | XRE family transcriptional regulator | - |
| HKJ32_RS02130 () | 502671..502970 | + | 300 | WP_004087025.1 | HigA family addiction module antidote protein | - |
| HKJ32_RS02135 () | 502975..503562 | - | 588 | WP_128283746.1 | phage baseplate assembly protein V | - |
| HKJ32_RS02140 () | 503559..504101 | - | 543 | WP_154436958.1 | hypothetical protein | - |
| HKJ32_RS02145 () | 504077..504598 | - | 522 | WP_169710140.1 | hypothetical protein | - |
| HKJ32_RS02150 () | 504595..504918 | - | 324 | WP_169709908.1 | hypothetical protein | - |
| HKJ32_RS02155 () | 504918..505178 | - | 261 | WP_012337650.1 | hypothetical protein | - |
| HKJ32_RS02160 () | 505196..507070 | - | 1875 | WP_169710141.1 | phage major capsid protein | - |
| HKJ32_RS02165 () | 507067..508653 | - | 1587 | WP_169710142.1 | phage portal protein | - |
| HKJ32_RS02170 () | 508650..509201 | - | 552 | WP_038230179.1 | hypothetical protein | - |
| HKJ32_RS02175 () | 509205..511157 | - | 1953 | WP_169710143.1 | phage terminase large subunit family protein | - |
| HKJ32_RS02180 () | 511150..511725 | - | 576 | WP_004086888.1 | terminase small subunit | - |
| HKJ32_RS02185 () | 511856..512080 | - | 225 | WP_012337656.1 | hypothetical protein | - |
| HKJ32_RS02190 () | 512082..512543 | - | 462 | WP_169709972.1 | hypothetical protein | - |
| HKJ32_RS02195 () | 512533..512862 | - | 330 | WP_004085022.1 | phage holin family protein | - |
| HKJ32_RS02200 () | 512855..513355 | - | 501 | WP_128382956.1 | lysozyme | - |
| HKJ32_RS02205 () | 513455..514186 | - | 732 | WP_169709925.1 | site-specific DNA-methyltransferase | - |
| HKJ32_RS02210 () | 514376..514711 | - | 336 | WP_004085025.1 | type II toxin-antitoxin system HicB family antitoxin | Antitoxin Detail |
| HKJ32_RS02215 () | 514708..514962 | - | 255 | WP_004089517.1 | type II toxin-antitoxin system HicA family toxin | Toxin Detail |
| HKJ32_RS02220 () | 515015..515737 | - | 723 | WP_012337661.1 | hypothetical protein | - |
| HKJ32_RS02230 () | 516081..516239 | + | 159 | WP_021358690.1 | hypothetical protein | - |
| HKJ32_RS12185 () | 516884..517483 | + | 600 | WP_162008660.1 | hypothetical protein | - |
| HKJ32_RS02240 () | 517480..517758 | + | 279 | WP_038230497.1 | VRR-NUC domain-containing protein | - |
| HKJ32_RS02245 () | 517760..518164 | - | 405 | WP_004085029.1 | hypothetical protein | - |
| HKJ32_RS02250 () | 518249..519667 | + | 1419 | WP_169709926.1 | DEAD/DEAH box helicase | - |
| HKJ32_RS02255 () | 519664..519828 | + | 165 | WP_004086189.1 | hypothetical protein | - |
| HKJ32_RS02260 () | 519821..520069 | + | 249 | WP_004086191.1 | DUF4224 domain-containing protein | - |
| HKJ32_RS02265 () | 520069..521088 | + | 1020 | WP_169709927.1 | tyrosine-type recombinase/integrase | - |
| HKJ32_RS02270 () | 521865..522506 | + | 642 | WP_004085684.1 | ParA family protein | - |
| HKJ32_RS02275 () | 522534..523010 | + | 477 | WP_004085683.1 | histidine phosphatase family protein | - |
| HKJ32_RS02280 () | 523015..523587 | + | 573 | WP_004085682.1 | YceI family protein | - |
| HKJ32_RS02285 () | 523584..525542 | + | 1959 | WP_038231298.1 | phospholipase D family protein | - |
| HKJ32_RS02290 () | 526528..526920 | - | 393 | WP_071869548.1 | helix-turn-helix domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|