MGE detailed information
MGE type: Prophage MGE length: 43275 bp
Accession: NZ_CP052853 Location: 204628..247902 Organism: Xylella fastidiosa subsp. multiplex strain RH1 Replicon: chromosome
Accession: NZ_CP052853 Location: 204628..247902 Organism: Xylella fastidiosa subsp. multiplex strain RH1 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HKJ33_RS00760 () | 200883..201239 | + | 357 | WP_004085035.1 | 6-carboxytetrahydropterin synthase QueD | - |
| HKJ33_RS00765 () | 202338..202862 | - | 525 | WP_004085034.1 | DUF2059 domain-containing protein | - |
| HKJ33_RS00770 () | 203387..204016 | + | 630 | WP_004085033.1 | lysophospholipid acyltransferase family protein | - |
| HKJ33_RS00775 () | 204628..205335 | - | 708 | WP_004085032.1 | DUF502 domain-containing protein | - |
| HKJ33_RS00780 () | 205481..206500 | - | 1020 | WP_169709883.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| HKJ33_RS00785 () | 206500..206748 | - | 249 | WP_169709884.1 | DUF4224 domain-containing protein | - |
| HKJ33_RS00790 () | 206741..206905 | - | 165 | WP_169709885.1 | hypothetical protein | - |
| HKJ33_RS00795 () | 206902..208320 | - | 1419 | WP_169709886.1 | DEAD/DEAH box helicase | - |
| HKJ33_RS00800 () | 208405..208830 | + | 426 | WP_169709887.1 | hypothetical protein | - |
| HKJ33_RS00805 () | 208832..209110 | - | 279 | WP_004086077.1 | VRR-NUC domain-containing protein | - |
| HKJ33_RS00810 () | 209107..211287 | - | 2181 | WP_169709888.1 | DNA polymerase | - |
| HKJ33_RS00815 () | 211289..212440 | - | 1152 | WP_169710109.1 | hypothetical protein | - |
| HKJ33_RS00820 () | 212527..213072 | - | 546 | WP_169709889.1 | DUF2815 family protein | - |
| HKJ33_RS00825 () | 213092..214367 | - | 1276 | Protein_150 | DUF2800 domain-containing protein | - |
| HKJ33_RS00830 () | 214364..214795 | - | 432 | WP_021358684.1 | hypothetical protein | - |
| HKJ33_RS00835 () | 214838..215068 | - | 231 | WP_169709890.1 | hypothetical protein | - |
| HKJ33_RS00840 () | 215100..215291 | - | 192 | WP_169709891.1 | hypothetical protein | - |
| HKJ33_RS00845 () | 215315..215506 | - | 192 | WP_004086365.1 | hypothetical protein | - |
| HKJ33_RS00850 () | 215503..215904 | - | 402 | WP_169709892.1 | hypothetical protein | - |
| HKJ33_RS00855 () | 215901..216371 | - | 471 | WP_169709893.1 | DUF1566 domain-containing protein | - |
| HKJ33_RS00860 () | 216368..216811 | - | 444 | WP_169710110.1 | hypothetical protein | - |
| HKJ33_RS00865 () | 216916..217476 | - | 561 | WP_169709894.1 | hypothetical protein | - |
| HKJ33_RS00870 () | 217657..218412 | - | 756 | WP_169709895.1 | XRE family transcriptional regulator | - |
| HKJ33_RS00875 () | 218495..218731 | + | 237 | WP_024748600.1 | helix-turn-helix domain-containing protein | - |
| HKJ33_RS00880 () | 218721..219050 | + | 330 | WP_169709896.1 | hypothetical protein | - |
| HKJ33_RS00885 () | 219138..219521 | + | 384 | WP_012337854.1 | hypothetical protein | - |
| HKJ33_RS00890 () | 219518..219784 | + | 267 | Protein_163 | hypothetical protein | - |
| HKJ33_RS00895 () | 219781..220389 | + | 609 | WP_169709897.1 | hypothetical protein | - |
| HKJ33_RS00900 () | 220527..223058 | + | 2532 | WP_169709898.1 | DNA primase | - |
| HKJ33_RS00905 () | 223410..224027 | + | 618 | WP_169709899.1 | hypothetical protein | - |
| HKJ33_RS00910 () | 223994..224488 | + | 495 | WP_169709900.1 | lysozyme | - |
| HKJ33_RS00915 () | 224481..224810 | + | 330 | WP_004086884.1 | phage holin family protein | - |
| HKJ33_RS00920 () | 224800..225261 | + | 462 | WP_169709901.1 | hypothetical protein | - |
| HKJ33_RS00925 () | 225263..225487 | + | 225 | WP_169709902.1 | hypothetical protein | - |
| HKJ33_RS00930 () | 225618..226193 | + | 576 | WP_169709903.1 | terminase small subunit | - |
| HKJ33_RS00935 () | 226186..228138 | + | 1953 | WP_169709904.1 | phage terminase large subunit family protein | - |
| HKJ33_RS00940 () | 228142..228693 | + | 552 | WP_169709905.1 | hypothetical protein | - |
| HKJ33_RS00945 () | 228690..230276 | + | 1587 | WP_169709906.1 | phage portal protein | - |
| HKJ33_RS00950 () | 230273..232147 | + | 1875 | WP_169709907.1 | phage major capsid protein | - |
| HKJ33_RS00955 () | 232165..232425 | + | 261 | WP_012337650.1 | hypothetical protein | - |
| HKJ33_RS00960 () | 232425..232748 | + | 324 | WP_169709908.1 | hypothetical protein | - |
| HKJ33_RS00965 () | 232745..233272 | + | 528 | WP_169709909.1 | hypothetical protein | - |
| HKJ33_RS00970 () | 233248..233790 | + | 543 | WP_154436958.1 | hypothetical protein | - |
| HKJ33_RS00975 () | 233787..234374 | + | 588 | WP_042836490.1 | phage baseplate assembly protein V | - |
| HKJ33_RS00980 () | 234379..234654 | - | 276 | WP_004085172.1 | HigA family addiction module antidote protein | Antitoxin Detail |
| HKJ33_RS00985 () | 234665..234946 | - | 282 | WP_004085174.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| HKJ33_RS00990 () | 235144..235482 | + | 339 | WP_004088650.1 | GPW/gp25 family protein | - |
| HKJ33_RS00995 () | 235482..236375 | + | 894 | WP_038284057.1 | baseplate J/gp47 family protein | - |
| HKJ33_RS01000 () | 236368..236925 | + | 558 | WP_169709910.1 | phage tail protein I | - |
| HKJ33_RS01005 () | 236933..238525 | + | 1593 | WP_169709911.1 | tail fiber domain-containing protein | - |
| HKJ33_RS01010 () | 238590..239768 | + | 1179 | WP_038230457.1 | phage tail sheath family protein | - |
| HKJ33_RS01015 () | 239768..240277 | + | 510 | WP_004086986.1 | phage major tail tube protein | - |
| HKJ33_RS01020 () | 240280..240567 | + | 288 | WP_169709912.1 | phage tail assembly protein | - |
| HKJ33_RS01025 () | 240694..242913 | + | 2220 | WP_169710111.1 | phage tail tape measure protein | - |
| HKJ33_RS01030 () | 242910..243392 | + | 483 | WP_169709913.1 | phage tail protein | - |
| HKJ33_RS01035 () | 243389..243607 | + | 219 | WP_040123123.1 | tail protein X | - |
| HKJ33_RS01040 () | 243598..244680 | + | 1083 | WP_169709914.1 | phage late control D family protein | - |
| HKJ33_RS01045 () | 245099..246028 | + | 930 | WP_169709915.1 | serine protease | - |
| HKJ33_RS01050 () | 246238..246459 | + | 222 | WP_143704329.1 | hypothetical protein | - |
| HKJ33_RS01055 () | 246786..247385 | - | 600 | WP_004086316.1 | class I SAM-dependent methyltransferase | - |
| HKJ33_RS01060 () | 247450..247902 | + | 453 | WP_004086315.1 | CopD family protein | - |
| HKJ33_RS01065 () | 248068..249027 | - | 960 | WP_012337572.1 | acetyl-CoA carboxylase carboxyltransferase subunit alpha | - |
| HKJ33_RS01070 () | 249122..252703 | - | 3582 | WP_128723644.1 | DNA polymerase III subunit alpha | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|