MGE detailed information
MGE type: Genomic_island MGE length: 20476 bp
Accession: NZ_CP052853 Location: 1780796..1801271 Organism: Xylella fastidiosa subsp. multiplex strain RH1 Replicon: chromosome
Accession: NZ_CP052853 Location: 1780796..1801271 Organism: Xylella fastidiosa subsp. multiplex strain RH1 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HKJ33_RS08215 () | 1776285..1776753 | - | 469 | Protein_1603 | glycoside hydrolase family 25 protein | - |
| HKJ33_RS08220 () | 1776890..1777072 | + | 183 | WP_027700467.1 | hypothetical protein | - |
| HKJ33_RS08225 () | 1777356..1778282 | - | 927 | WP_004085766.1 | Grx4 family monothiol glutaredoxin | - |
| HKJ33_RS08230 () | 1778348..1779124 | + | 777 | WP_027700469.1 | polysaccharide deacetylase family protein | - |
| HKJ33_RS08235 () | 1779768..1779959 | - | 192 | WP_021358405.1 | hypothetical protein | - |
| HKJ33_RS08240 () | 1780377..1780796 | - | 420 | WP_004085763.1 | putative toxin-antitoxin system toxin component, PIN family | - |
| HKJ33_RS08245 () | 1780796..1781035 | - | 240 | WP_004085761.1 | ribbon-helix-helix domain-containing protein | - |
| HKJ33_RS08250 () | 1781480..1781722 | + | 243 | WP_004085758.1 | type II toxin-antitoxin system ParD family antitoxin | Antitoxin Detail |
| HKJ33_RS08255 () | 1781715..1782002 | + | 288 | WP_004085905.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| HKJ33_RS08260 () | 1782090..1782656 | + | 567 | WP_004085755.1 | Tn3 family transposase TnpR_ISPa38 | Transposase |
| HKJ33_RS08265 () | 1782709..1783905 | - | 1197 | WP_004083925.1 | IS607 family transposase ISCARN56 | Transposase |
| HKJ33_RS08270 () | 1783899..1784525 | - | 627 | WP_038230952.1 | IS607 family transposase ISCfe1 | Transposase |
| HKJ33_RS08275 () | 1784755..1786029 | - | 1275 | WP_012337985.1 | pyridoxal phosphate-dependent aminotransferase | - |
| HKJ33_RS08280 () | 1786434..1788596 | + | 2163 | WP_012337986.1 | Vitamin B12 import ATP-binding protein BtuD | VF |
| HKJ33_RS08285 () | 1788593..1790014 | + | 1422 | WP_004085930.1 | hypothetical protein | VF |
| HKJ33_RS08290 () | 1790541..1791164 | + | 624 | WP_004086041.1 | hypothetical protein | - |
| HKJ33_RS08295 () | 1791161..1791433 | + | 273 | WP_021358268.1 | hypothetical protein | - |
| HKJ33_RS08300 () | 1791436..1792053 | + | 618 | WP_004086046.1 | hypothetical protein | - |
| HKJ33_RS08305 () | 1792050..1793357 | + | 1308 | WP_012337989.1 | hypothetical protein | - |
| HKJ33_RS08310 () | 1794077..1794319 | + | 243 | WP_154128367.1 | hypothetical protein | - |
| HKJ33_RS08315 () | 1794409..1796142 | - | 1734 | WP_004085933.1 | hypothetical protein | - |
| HKJ33_RS08325 () | 1796783..1797733 | - | 951 | WP_012337991.1 | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase | - |
| HKJ33_RS08330 () | 1797792..1798295 | - | 504 | WP_004085935.1 | Lipoprotein signal peptidase | VF |
| HKJ33_RS08335 () | 1798440..1801271 | - | 2832 | WP_004085936.1 | isoleucine--tRNA ligase | - |
| HKJ33_RS08340 () | 1801268..1802215 | - | 948 | WP_004085938.1 | bifunctional riboflavin kinase/FAD synthetase | - |
| HKJ33_RS08345 () | 1802377..1803987 | - | 1611 | WP_004085940.1 | murein biosynthesis integral membrane protein MurJ | - |
| HKJ33_RS08350 () | 1804087..1804356 | + | 270 | WP_010894866.1 | 30S ribosomal protein S20 | - |
| HKJ33_RS08355 () | 1804473..1805546 | - | 1074 | WP_004085947.1 | GTPase ObgE | - |
| HKJ33_RS08360 () | 1805721..1805978 | - | 258 | WP_004085949.1 | 50S ribosomal protein L27 | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|