MGE detailed information
MGE type: Prophage MGE length: 84211 bp
Accession: NZ_CP052074 Location: 1855681..1939891 Organism: Ralstonia solanacearum strain FJAT448.F1 Replicon: chromosome
Accession: NZ_CP052074 Location: 1855681..1939891 Organism: Ralstonia solanacearum strain FJAT448.F1 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HI820_RS08750 () | 1851047..1852255 | + | 1209 | WP_016721806.1 | efflux RND transporter periplasmic adaptor subunit | - |
| HI820_RS08755 () | 1852322..1855441 | + | 3120 | WP_016721807.1 | efflux RND transporter permease subunit | - |
| HI820_RS08765 () | 1855681..1856907 | - | 1227 | WP_071895469.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| HI820_RS08770 () | 1857065..1857259 | - | 195 | WP_016721809.1 | hypothetical protein | - |
| HI820_RS08775 () | 1857252..1857614 | - | 363 | WP_016721810.1 | hypothetical protein | - |
| HI820_RS08780 () | 1857611..1859419 | - | 1809 | WP_071895470.1 | DNA cytosine methyltransferase | - |
| HI820_RS08785 () | 1859416..1859655 | - | 240 | WP_016721813.1 | hypothetical protein | - |
| HI820_RS08790 () | 1859652..1860176 | - | 525 | WP_016721814.1 | hypothetical protein | - |
| HI820_RS08795 () | 1860173..1860649 | - | 477 | WP_071895471.1 | hypothetical protein | - |
| HI820_RS08800 () | 1860646..1861200 | - | 555 | WP_016721816.1 | deoxynucleotide monophosphate kinase | - |
| HI820_RS08805 () | 1861253..1862104 | - | 852 | WP_071895472.1 | DUF2303 family protein | - |
| HI820_RS08810 () | 1862137..1862481 | - | 345 | WP_071091286.1 | hypothetical protein | - |
| HI820_RS08815 () | 1862532..1862738 | - | 207 | WP_016721820.1 | hypothetical protein | - |
| HI820_RS08820 () | 1862735..1863361 | - | 627 | WP_155773164.1 | hypothetical protein | - |
| HI820_RS08825 () | 1863358..1863738 | - | 381 | WP_016721822.1 | hypothetical protein | - |
| HI820_RS08830 () | 1863747..1863902 | - | 156 | WP_155773165.1 | hypothetical protein | - |
| HI820_RS08835 () | 1864065..1864553 | - | 489 | WP_081369067.1 | DUF2335 domain-containing protein | - |
| HI820_RS08840 () | 1864522..1864764 | - | 243 | WP_016721824.1 | hypothetical protein | - |
| HI820_RS08845 () | 1864866..1865738 | - | 873 | WP_016721825.1 | S24 family peptidase | - |
| HI820_RS08850 () | 1865821..1866045 | + | 225 | WP_016721826.1 | helix-turn-helix domain-containing protein | - |
| HI820_RS08855 () | 1866272..1866781 | + | 510 | WP_016721827.1 | hypothetical protein | - |
| HI820_RS08860 () | 1866774..1866998 | + | 225 | WP_016721828.1 | hypothetical protein | - |
| HI820_RS08865 () | 1866995..1867279 | + | 285 | WP_043945175.1 | hypothetical protein | - |
| HI820_RS08870 () | 1867276..1869702 | + | 2427 | WP_071895474.1 | hypothetical protein | - |
| HI820_RS08875 () | 1870293..1870700 | + | 408 | WP_155773166.1 | hypothetical protein | - |
| HI820_RS08880 () | 1870747..1871391 | + | 645 | WP_155773167.1 | hypothetical protein | - |
| HI820_RS08885 () | 1871667..1872653 | - | 987 | WP_016721870.1 | IS5 family transposase IS1021 | Transposase |
| HI820_RS08890 () | 1872768..1873274 | + | 507 | WP_069079018.1 | terminase small subunit | - |
| HI820_RS08895 () | 1873297..1875255 | + | 1959 | WP_071895476.1 | phage terminase large subunit family protein | - |
| HI820_RS08900 () | 1875268..1875489 | + | 222 | WP_064048049.1 | hypothetical protein | - |
| HI820_RS08905 () | 1875491..1876936 | + | 1446 | WP_069079016.1 | phage portal protein | - |
| HI820_RS08910 () | 1877011..1879083 | + | 2073 | WP_069079015.1 | Mu-like prophage major head subunit gpT family protein | - |
| HI820_RS08915 () | 1879167..1879499 | + | 333 | WP_071895477.1 | DUF2190 family protein | - |
| HI820_RS08920 () | 1879499..1879807 | + | 309 | WP_016721840.1 | hypothetical protein | - |
| HI820_RS08925 () | 1879804..1880382 | + | 579 | WP_069079013.1 | hypothetical protein | - |
| HI820_RS08930 () | 1880403..1880633 | + | 231 | WP_016721841.1 | DUF2635 domain-containing protein | - |
| HI820_RS08935 () | 1880633..1882114 | + | 1482 | WP_069079012.1 | phage tail sheath subtilisin-like domain-containing protein | - |
| HI820_RS08940 () | 1882163..1882525 | + | 363 | WP_020371381.1 | phage tail tube protein | - |
| HI820_RS08945 () | 1882525..1882854 | + | 330 | WP_016721844.1 | phage tail assembly protein | - |
| HI820_RS08950 () | 1882934..1884661 | + | 1728 | WP_069079011.1 | hypothetical protein | - |
| HI820_RS08955 () | 1884770..1885009 | - | 240 | WP_071895631.1 | hypothetical protein | - |
| HI820_RS08960 () | 1885267..1886223 | + | 957 | WP_071895478.1 | DNA circularization N-terminal domain-containing protein | - |
| HI820_RS08965 () | 1886228..1887193 | + | 966 | WP_016721735.1 | IS5 family transposase IS1405 | Transposase |
| HI820_RS08970 () | 1887405..1887623 | + | 219 | WP_155773168.1 | hypothetical protein | - |
| HI820_RS08975 () | 1887620..1888804 | + | 1185 | WP_071895480.1 | hypothetical protein | - |
| HI820_RS08980 () | 1888858..1889376 | + | 519 | WP_081365199.1 | phage baseplate assembly protein V | - |
| HI820_RS08985 () | 1889376..1889834 | + | 459 | WP_069079008.1 | phage GP46 family protein | - |
| HI820_RS08990 () | 1889836..1890888 | + | 1053 | WP_071895481.1 | baseplate J/gp47 family protein | - |
| HI820_RS08995 () | 1890879..1891475 | + | 597 | WP_071895482.1 | DUF2313 domain-containing protein | - |
| HI820_RS09000 () | 1891472..1892671 | + | 1200 | WP_071895483.1 | hypothetical protein | - |
| HI820_RS09005 () | 1892675..1893160 | + | 486 | WP_016721856.1 | DUF4376 domain-containing protein | - |
| HI820_RS09010 () | 1893284..1893775 | + | 492 | WP_016721857.1 | glycoside hydrolase family protein | - |
| HI820_RS09015 () | 1893776..1894084 | + | 309 | WP_071895484.1 | hypothetical protein | - |
| HI820_RS09020 () | 1894087..1894353 | + | 267 | WP_069079003.1 | hypothetical protein | - |
| HI820_RS09025 () | 1894350..1894709 | + | 360 | WP_069079002.1 | hypothetical protein | - |
| HI820_RS09030 () | 1894833..1895159 | - | 327 | WP_016721915.1 | hypothetical protein | - |
| HI820_RS09035 () | 1896329..1897366 | - | 1038 | WP_071895485.1 | LysM peptidoglycan-binding domain-containing protein | - |
| HI820_RS09040 () | 1897803..1898807 | + | 1005 | WP_071895486.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| HI820_RS09045 () | 1898808..1899116 | - | 309 | WP_016721863.1 | hypothetical protein | - |
| HI820_RS09050 () | 1899182..1899631 | - | 450 | Protein_1774 | hypothetical protein | - |
| HI820_RS09055 () | 1899628..1900182 | - | 555 | WP_016721865.1 | hypothetical protein | - |
| HI820_RS09060 () | 1900202..1900417 | - | 216 | WP_016721866.1 | hypothetical protein | - |
| HI820_RS09065 () | 1900423..1900575 | - | 153 | WP_016721867.1 | hypothetical protein | - |
| HI820_RS09070 () | 1900572..1901012 | - | 441 | WP_016721868.1 | hypothetical protein | - |
| HI820_RS09075 () | 1901009..1901383 | - | 375 | WP_016721869.1 | hypothetical protein | - |
| HI820_RS09080 () | 1901842..1902828 | - | 987 | WP_016721870.1 | IS5 family transposase IS1021 | Transposase |
| HI820_RS09085 () | 1903496..1904356 | - | 861 | WP_080606383.1 | trypsin-like peptidase domain-containing protein | - |
| HI820_RS09090 () | 1904636..1905331 | - | 696 | WP_016721872.1 | hypothetical protein | - |
| HI820_RS09095 () | 1905406..1905681 | + | 276 | WP_071895489.1 | helix-turn-helix domain-containing protein | - |
| HI820_RS09100 () | 1905951..1906187 | - | 237 | WP_016721873.1 | hypothetical protein | - |
| HI820_RS09105 () | 1906399..1906914 | + | 516 | WP_016721874.1 | hypothetical protein | - |
| HI820_RS09110 () | 1906911..1907321 | + | 411 | WP_016721875.1 | hypothetical protein | - |
| HI820_RS09115 () | 1907330..1907527 | + | 198 | WP_016721876.1 | hypothetical protein | - |
| HI820_RS09120 () | 1907524..1908558 | + | 1035 | WP_071895490.1 | hypothetical protein | - |
| HI820_RS09125 () | 1908555..1908851 | + | 297 | WP_071895491.1 | hypothetical protein | - |
| HI820_RS09130 () | 1908875..1909474 | + | 600 | WP_071895492.1 | hypothetical protein | - |
| HI820_RS09135 () | 1909658..1910032 | + | 375 | WP_016721879.1 | HNH endonuclease | - |
| HI820_RS09140 () | 1910424..1910765 | + | 342 | WP_049832880.1 | hypothetical protein | - |
| HI820_RS09145 () | 1910810..1912480 | + | 1671 | WP_016721881.1 | terminase large subunit | - |
| HI820_RS09150 () | 1912482..1912640 | + | 159 | WP_020371382.1 | hypothetical protein | - |
| HI820_RS09155 () | 1912637..1913860 | + | 1224 | WP_016721883.1 | phage portal protein | - |
| HI820_RS09160 () | 1913868..1914479 | + | 612 | WP_016721884.1 | HK97 family phage prohead protease | - |
| HI820_RS09165 () | 1914490..1915737 | + | 1248 | WP_071895493.1 | phage major capsid protein | - |
| HI820_RS09170 () | 1915771..1916094 | + | 324 | WP_016721886.1 | head-tail connector protein | - |
| HI820_RS09175 () | 1916102..1916428 | + | 327 | WP_016721887.1 | phage head closure protein | - |
| HI820_RS09180 () | 1916431..1916934 | + | 504 | WP_038961918.1 | hypothetical protein | - |
| HI820_RS09185 () | 1916924..1917277 | + | 354 | WP_016721889.1 | DUF3168 domain-containing protein | - |
| HI820_RS09190 () | 1917341..1917994 | + | 654 | WP_016721890.1 | phage tail protein | - |
| HI820_RS09195 () | 1918001..1918321 | + | 321 | WP_016721891.1 | hypothetical protein | - |
| HI820_RS09200 () | 1918369..1918629 | + | 261 | WP_016721892.1 | DUF1799 domain-containing protein | - |
| HI820_RS09205 () | 1918631..1921492 | + | 2862 | WP_071895495.1 | phage tail tape measure protein | - |
| HI820_RS09210 () | 1921495..1921833 | + | 339 | WP_016721894.1 | phage tail protein | - |
| HI820_RS09215 () | 1921830..1922507 | + | 678 | WP_016721895.1 | phage tail protein | - |
| HI820_RS09220 () | 1922513..1923109 | + | 597 | WP_016721896.1 | tail fiber assembly protein | - |
| HI820_RS09225 () | 1923106..1923807 | + | 702 | WP_071895496.1 | phage minor tail protein L | - |
| HI820_RS09230 () | 1923809..1924519 | + | 711 | WP_071895497.1 | C40 family peptidase | - |
| HI820_RS09235 () | 1924523..1925116 | + | 594 | WP_016721899.1 | tail assembly protein | - |
| HI820_RS09240 () | 1925113..1925451 | - | 339 | WP_038961924.1 | type II toxin-antitoxin system HicB family antitoxin | Antitoxin Detail |
| HI820_RS09245 () | 1925444..1925707 | - | 264 | WP_016721901.1 | type II toxin-antitoxin system HicA family toxin | Toxin Detail |
| HI820_RS09250 () | 1925760..1928915 | + | 3156 | WP_016721902.1 | host specificity protein J | - |
| HI820_RS09255 () | 1929252..1929908 | + | 657 | WP_038961925.1 | hypothetical protein | - |
| HI820_RS09260 () | 1929977..1930468 | + | 492 | WP_038961926.1 | glycoside hydrolase family protein | - |
| HI820_RS09265 () | 1930469..1930777 | + | 309 | WP_016721906.1 | hypothetical protein | - |
| HI820_RS09270 () | 1930780..1931049 | + | 270 | WP_071895498.1 | hypothetical protein | - |
| HI820_RS09275 () | 1931046..1931405 | + | 360 | WP_071895499.1 | hypothetical protein | - |
| HI820_RS09280 () | 1931533..1931859 | - | 327 | WP_071895500.1 | type V toxin-antitoxin system endoribonuclease antitoxin GhoS | - |
| HI820_RS09285 () | 1932663..1932932 | - | 270 | WP_071895501.1 | hypothetical protein | - |
| HI820_RS09290 () | 1932997..1934034 | - | 1038 | WP_071895502.1 | LysM peptidoglycan-binding domain-containing protein | - |
| HI820_RS09295 () | 1934235..1934468 | + | 234 | WP_155773169.1 | hypothetical protein | - |
| HI820_RS09300 () | 1935194..1936180 | - | 987 | WP_016721870.1 | IS5 family transposase IS1021 | Transposase |
| HI820_RS09305 () | 1936266..1937435 | - | 1170 | Protein_1825 | UvrD-helicase domain-containing protein | - |
| HI820_RS09310 () | 1937422..1939155 | - | 1734 | WP_071895503.1 | ATP-binding protein | - |
| HI820_RS09315 () | 1939697..1939891 | + | 195 | WP_011001649.1 | hypothetical protein | - |
| HI820_RS09320 () | 1939963..1941936 | + | 1974 | WP_020832095.1 | bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC | - |
| HI820_RS09325 () | 1942191..1943540 | + | 1350 | WP_016721979.1 | trigger factor | - |
| HI820_RS09330 () | 1943570..1944223 | + | 654 | WP_003267806.1 | ATP-dependent Clp endopeptidase proteolytic subunit ClpP | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|