MGE detailed information
MGE type: Prophage MGE length: 84211 bp
Accession: NZ_CP052072 Location: 1855645..1939855 Organism: Ralstonia solanacearum strain FJAT448.F50 Replicon: chromosome
Accession: NZ_CP052072 Location: 1855645..1939855 Organism: Ralstonia solanacearum strain FJAT448.F50 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HI821_RS08745 () | 1851011..1852219 | + | 1209 | WP_016721806.1 | efflux RND transporter periplasmic adaptor subunit | - |
| HI821_RS08750 () | 1852286..1855405 | + | 3120 | WP_016721807.1 | efflux RND transporter permease subunit | - |
| HI821_RS08760 () | 1855645..1856871 | - | 1227 | WP_071895469.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| HI821_RS08765 () | 1857029..1857223 | - | 195 | WP_016721809.1 | hypothetical protein | - |
| HI821_RS08770 () | 1857216..1857578 | - | 363 | WP_016721810.1 | hypothetical protein | - |
| HI821_RS08775 () | 1857575..1859383 | - | 1809 | WP_071895470.1 | DNA cytosine methyltransferase | - |
| HI821_RS08780 () | 1859380..1859619 | - | 240 | WP_016721813.1 | hypothetical protein | - |
| HI821_RS08785 () | 1859616..1860140 | - | 525 | WP_016721814.1 | hypothetical protein | - |
| HI821_RS08790 () | 1860137..1860613 | - | 477 | WP_071895471.1 | hypothetical protein | - |
| HI821_RS08795 () | 1860610..1861164 | - | 555 | WP_016721816.1 | deoxynucleotide monophosphate kinase | - |
| HI821_RS08800 () | 1861217..1862068 | - | 852 | WP_071895472.1 | DUF2303 family protein | - |
| HI821_RS08805 () | 1862101..1862445 | - | 345 | WP_071091286.1 | hypothetical protein | - |
| HI821_RS08810 () | 1862496..1862702 | - | 207 | WP_016721820.1 | hypothetical protein | - |
| HI821_RS08815 () | 1862699..1863325 | - | 627 | WP_155773164.1 | hypothetical protein | - |
| HI821_RS08820 () | 1863322..1863702 | - | 381 | WP_016721822.1 | hypothetical protein | - |
| HI821_RS08825 () | 1863711..1863866 | - | 156 | WP_155773165.1 | hypothetical protein | - |
| HI821_RS08830 () | 1864029..1864517 | - | 489 | WP_081369067.1 | DUF2335 domain-containing protein | - |
| HI821_RS08835 () | 1864486..1864728 | - | 243 | WP_016721824.1 | hypothetical protein | - |
| HI821_RS08840 () | 1864830..1865702 | - | 873 | WP_016721825.1 | S24 family peptidase | - |
| HI821_RS08845 () | 1865785..1866009 | + | 225 | WP_016721826.1 | helix-turn-helix domain-containing protein | - |
| HI821_RS08850 () | 1866236..1866745 | + | 510 | WP_016721827.1 | hypothetical protein | - |
| HI821_RS08855 () | 1866738..1866962 | + | 225 | WP_016721828.1 | hypothetical protein | - |
| HI821_RS08860 () | 1866959..1867243 | + | 285 | WP_043945175.1 | hypothetical protein | - |
| HI821_RS08865 () | 1867240..1869666 | + | 2427 | WP_071895474.1 | hypothetical protein | - |
| HI821_RS08870 () | 1870257..1870664 | + | 408 | WP_155773166.1 | hypothetical protein | - |
| HI821_RS08875 () | 1870711..1871355 | + | 645 | WP_155773167.1 | hypothetical protein | - |
| HI821_RS08880 () | 1871631..1872617 | - | 987 | WP_016721870.1 | IS5 family transposase IS1021 | Transposase |
| HI821_RS08885 () | 1872732..1873238 | + | 507 | WP_069079018.1 | terminase small subunit | - |
| HI821_RS08890 () | 1873261..1875219 | + | 1959 | WP_071895476.1 | phage terminase large subunit family protein | - |
| HI821_RS08895 () | 1875232..1875453 | + | 222 | WP_064048049.1 | hypothetical protein | - |
| HI821_RS08900 () | 1875455..1876900 | + | 1446 | WP_069079016.1 | phage portal protein | - |
| HI821_RS08905 () | 1876975..1879047 | + | 2073 | WP_069079015.1 | Mu-like prophage major head subunit gpT family protein | - |
| HI821_RS08910 () | 1879131..1879463 | + | 333 | WP_071895477.1 | DUF2190 family protein | - |
| HI821_RS08915 () | 1879463..1879771 | + | 309 | WP_016721840.1 | hypothetical protein | - |
| HI821_RS08920 () | 1879768..1880346 | + | 579 | WP_069079013.1 | hypothetical protein | - |
| HI821_RS08925 () | 1880367..1880597 | + | 231 | WP_016721841.1 | DUF2635 domain-containing protein | - |
| HI821_RS08930 () | 1880597..1882078 | + | 1482 | WP_069079012.1 | phage tail sheath subtilisin-like domain-containing protein | - |
| HI821_RS08935 () | 1882127..1882489 | + | 363 | WP_020371381.1 | phage tail tube protein | - |
| HI821_RS08940 () | 1882489..1882818 | + | 330 | WP_016721844.1 | phage tail assembly protein | - |
| HI821_RS08945 () | 1882898..1884625 | + | 1728 | WP_069079011.1 | hypothetical protein | - |
| HI821_RS08950 () | 1884734..1884973 | - | 240 | WP_071895631.1 | hypothetical protein | - |
| HI821_RS08955 () | 1885231..1886187 | + | 957 | WP_071895478.1 | DNA circularization N-terminal domain-containing protein | - |
| HI821_RS08960 () | 1886192..1887157 | + | 966 | WP_016721735.1 | IS5 family transposase IS1405 | Transposase |
| HI821_RS08965 () | 1887369..1887587 | + | 219 | WP_155773168.1 | hypothetical protein | - |
| HI821_RS08970 () | 1887584..1888768 | + | 1185 | WP_071895480.1 | hypothetical protein | - |
| HI821_RS08975 () | 1888822..1889340 | + | 519 | WP_081365199.1 | phage baseplate assembly protein V | - |
| HI821_RS08980 () | 1889340..1889798 | + | 459 | WP_069079008.1 | phage GP46 family protein | - |
| HI821_RS08985 () | 1889800..1890852 | + | 1053 | WP_071895481.1 | baseplate J/gp47 family protein | - |
| HI821_RS08990 () | 1890843..1891439 | + | 597 | WP_071895482.1 | DUF2313 domain-containing protein | - |
| HI821_RS08995 () | 1891436..1892635 | + | 1200 | WP_071895483.1 | hypothetical protein | - |
| HI821_RS09000 () | 1892639..1893124 | + | 486 | WP_016721856.1 | DUF4376 domain-containing protein | - |
| HI821_RS09005 () | 1893248..1893739 | + | 492 | WP_016721857.1 | glycoside hydrolase family protein | - |
| HI821_RS09010 () | 1893740..1894048 | + | 309 | WP_071895484.1 | hypothetical protein | - |
| HI821_RS09015 () | 1894051..1894317 | + | 267 | WP_069079003.1 | hypothetical protein | - |
| HI821_RS09020 () | 1894314..1894673 | + | 360 | WP_069079002.1 | hypothetical protein | - |
| HI821_RS09025 () | 1894797..1895123 | - | 327 | WP_016721915.1 | hypothetical protein | - |
| HI821_RS09030 () | 1896293..1897330 | - | 1038 | WP_071895485.1 | LysM peptidoglycan-binding domain-containing protein | - |
| HI821_RS09035 () | 1897767..1898771 | + | 1005 | WP_071895486.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| HI821_RS09040 () | 1898772..1899080 | - | 309 | WP_016721863.1 | hypothetical protein | - |
| HI821_RS09045 () | 1899146..1899595 | - | 450 | Protein_1773 | hypothetical protein | - |
| HI821_RS09050 () | 1899592..1900146 | - | 555 | WP_016721865.1 | hypothetical protein | - |
| HI821_RS09055 () | 1900166..1900381 | - | 216 | WP_016721866.1 | hypothetical protein | - |
| HI821_RS09060 () | 1900387..1900539 | - | 153 | WP_016721867.1 | hypothetical protein | - |
| HI821_RS09065 () | 1900536..1900976 | - | 441 | WP_016721868.1 | hypothetical protein | - |
| HI821_RS09070 () | 1900973..1901347 | - | 375 | WP_016721869.1 | hypothetical protein | - |
| HI821_RS09075 () | 1901806..1902792 | - | 987 | WP_016721870.1 | IS5 family transposase IS1021 | Transposase |
| HI821_RS09080 () | 1903460..1904320 | - | 861 | WP_080606383.1 | trypsin-like peptidase domain-containing protein | - |
| HI821_RS09085 () | 1904600..1905295 | - | 696 | WP_016721872.1 | hypothetical protein | - |
| HI821_RS09090 () | 1905370..1905645 | + | 276 | WP_071895489.1 | helix-turn-helix domain-containing protein | - |
| HI821_RS09095 () | 1905915..1906151 | - | 237 | WP_016721873.1 | hypothetical protein | - |
| HI821_RS09100 () | 1906363..1906878 | + | 516 | WP_016721874.1 | hypothetical protein | - |
| HI821_RS09105 () | 1906875..1907285 | + | 411 | WP_016721875.1 | hypothetical protein | - |
| HI821_RS09110 () | 1907294..1907491 | + | 198 | WP_016721876.1 | hypothetical protein | - |
| HI821_RS09115 () | 1907488..1908522 | + | 1035 | WP_071895490.1 | hypothetical protein | - |
| HI821_RS09120 () | 1908519..1908815 | + | 297 | WP_071895491.1 | hypothetical protein | - |
| HI821_RS09125 () | 1908839..1909438 | + | 600 | WP_071895492.1 | hypothetical protein | - |
| HI821_RS09130 () | 1909622..1909996 | + | 375 | WP_016721879.1 | HNH endonuclease | - |
| HI821_RS09135 () | 1910388..1910729 | + | 342 | WP_049832880.1 | hypothetical protein | - |
| HI821_RS09140 () | 1910774..1912444 | + | 1671 | WP_016721881.1 | terminase large subunit | - |
| HI821_RS09145 () | 1912446..1912604 | + | 159 | WP_020371382.1 | hypothetical protein | - |
| HI821_RS09150 () | 1912601..1913824 | + | 1224 | WP_016721883.1 | phage portal protein | - |
| HI821_RS09155 () | 1913832..1914443 | + | 612 | WP_016721884.1 | HK97 family phage prohead protease | - |
| HI821_RS09160 () | 1914454..1915701 | + | 1248 | WP_071895493.1 | phage major capsid protein | - |
| HI821_RS09165 () | 1915735..1916058 | + | 324 | WP_016721886.1 | head-tail connector protein | - |
| HI821_RS09170 () | 1916066..1916392 | + | 327 | WP_016721887.1 | phage head closure protein | - |
| HI821_RS09175 () | 1916395..1916898 | + | 504 | WP_038961918.1 | hypothetical protein | - |
| HI821_RS09180 () | 1916888..1917241 | + | 354 | WP_016721889.1 | DUF3168 domain-containing protein | - |
| HI821_RS09185 () | 1917305..1917958 | + | 654 | WP_016721890.1 | phage tail protein | - |
| HI821_RS09190 () | 1917965..1918285 | + | 321 | WP_016721891.1 | hypothetical protein | - |
| HI821_RS09195 () | 1918333..1918593 | + | 261 | WP_016721892.1 | DUF1799 domain-containing protein | - |
| HI821_RS09200 () | 1918595..1921456 | + | 2862 | WP_071895495.1 | phage tail tape measure protein | - |
| HI821_RS09205 () | 1921459..1921797 | + | 339 | WP_016721894.1 | phage tail protein | - |
| HI821_RS09210 () | 1921794..1922471 | + | 678 | WP_016721895.1 | phage tail protein | - |
| HI821_RS09215 () | 1922477..1923073 | + | 597 | WP_016721896.1 | tail fiber assembly protein | - |
| HI821_RS09220 () | 1923070..1923771 | + | 702 | WP_071895496.1 | phage minor tail protein L | - |
| HI821_RS09225 () | 1923773..1924483 | + | 711 | WP_071895497.1 | C40 family peptidase | - |
| HI821_RS09230 () | 1924487..1925080 | + | 594 | WP_016721899.1 | tail assembly protein | - |
| HI821_RS09235 () | 1925077..1925415 | - | 339 | WP_038961924.1 | type II toxin-antitoxin system HicB family antitoxin | Antitoxin Detail |
| HI821_RS09240 () | 1925408..1925671 | - | 264 | WP_016721901.1 | type II toxin-antitoxin system HicA family toxin | Toxin Detail |
| HI821_RS09245 () | 1925724..1928879 | + | 3156 | WP_016721902.1 | host specificity protein J | - |
| HI821_RS09250 () | 1929216..1929872 | + | 657 | WP_038961925.1 | hypothetical protein | - |
| HI821_RS09255 () | 1929941..1930432 | + | 492 | WP_038961926.1 | glycoside hydrolase family protein | - |
| HI821_RS09260 () | 1930433..1930741 | + | 309 | WP_016721906.1 | hypothetical protein | - |
| HI821_RS09265 () | 1930744..1931013 | + | 270 | WP_071895498.1 | hypothetical protein | - |
| HI821_RS09270 () | 1931010..1931369 | + | 360 | WP_071895499.1 | hypothetical protein | - |
| HI821_RS09275 () | 1931497..1931823 | - | 327 | WP_071895500.1 | type V toxin-antitoxin system endoribonuclease antitoxin GhoS | - |
| HI821_RS09280 () | 1932627..1932896 | - | 270 | WP_071895501.1 | hypothetical protein | - |
| HI821_RS09285 () | 1932961..1933998 | - | 1038 | WP_071895502.1 | LysM peptidoglycan-binding domain-containing protein | - |
| HI821_RS09290 () | 1934199..1934432 | + | 234 | WP_155773169.1 | hypothetical protein | - |
| HI821_RS09295 () | 1935158..1936144 | - | 987 | WP_016721870.1 | IS5 family transposase IS1021 | Transposase |
| HI821_RS09300 () | 1936230..1937399 | - | 1170 | Protein_1824 | UvrD-helicase domain-containing protein | - |
| HI821_RS09305 () | 1937386..1939119 | - | 1734 | WP_071895503.1 | ATP-binding protein | - |
| HI821_RS09310 () | 1939661..1939855 | + | 195 | WP_011001649.1 | hypothetical protein | - |
| HI821_RS09315 () | 1939927..1941900 | + | 1974 | WP_020832095.1 | bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC | - |
| HI821_RS09320 () | 1942155..1943504 | + | 1350 | WP_016721979.1 | trigger factor | - |
| HI821_RS09325 () | 1943534..1944187 | + | 654 | WP_003267806.1 | ATP-dependent Clp endopeptidase proteolytic subunit ClpP | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|