MGE detailed information
MGE type: Genomic_island MGE length: 75739 bp
Accession: NZ_CP051753 Location: 860123..935861 Organism: Escherichia coli strain SCU-102 Replicon: chromosome
Accession: NZ_CP051753 Location: 860123..935861 Organism: Escherichia coli strain SCU-102 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HHJ21_RS03900 () | 855269..856018 | + | 750 | WP_000093948.1 | C40 family peptidase | - |
| HHJ21_RS03905 () | 856180..857919 | - | 1740 | WP_048967441.1 | flagellar biosynthesis protein FlhA | - |
| HHJ21_RS03910 () | 857864..858649 | + | 786 | WP_000207554.1 | putative lateral flagellar export/assembly protein LafU | - |
| HHJ21_RS03915 () | 858720..859775 | + | 1056 | WP_001226183.1 | DNA polymerase IV | - |
| HHJ21_RS03920 () | 859827..860120 | + | 294 | WP_000554755.1 | type I toxin-antitoxin system antitoxin YafN | - |
| HHJ21_RS03925 () | 860123..860521 | + | 399 | WP_048967440.1 | type II toxin-antitoxin system mRNA interferase toxin YafO | - |
| HHJ21_RS03930 () | 860531..860983 | + | 453 | WP_001059899.1 | GNAT family N-acetyltransferase | - |
| HHJ21_RS03935 () | 861216..861482 | + | 267 | WP_001389960.1 | RtcB family protein | - |
| HHJ21_RS03940 () | 861642..861782 | + | 141 | WP_001366468.1 | hypothetical protein | - |
| HHJ21_RS03945 () | 861839..863296 | - | 1458 | WP_001293009.1 | cytosol nonspecific dipeptidase | - |
| HHJ21_RS03950 () | 863557..864015 | + | 459 | WP_001291990.1 | xanthine phosphoribosyltransferase | - |
| HHJ21_RS03955 () | 864107..865351 | + | 1245 | WP_000189541.1 | esterase FrsA | - |
| - () | 864611..864691 | + | 81 | NuclAT_7 | - | - |
| - () | 864611..864691 | + | 81 | NuclAT_7 | - | - |
| - () | 864611..864691 | + | 81 | NuclAT_7 | - | - |
| - () | 864611..864691 | + | 81 | NuclAT_7 | - | - |
| HHJ21_RS03960 () | 865409..865810 | + | 402 | WP_000174681.1 | sigma factor-binding protein Crl | - |
| HHJ21_RS03965 () | 865849..866904 | - | 1056 | WP_000749879.1 | phosphoporin PhoE | - |
| HHJ21_RS03970 () | 867192..868295 | + | 1104 | WP_001285288.1 | glutamate 5-kinase | - |
| HHJ21_RS03975 () | 868307..869560 | + | 1254 | WP_000893287.1 | glutamate-5-semialdehyde dehydrogenase | - |
| HHJ21_RS03985 () | 869914..871116 | + | 1203 | WP_000772654.1 | hypothetical protein ; Integrase | Integrase |
| HHJ21_RS03990 () | 871361..871828 | + | 468 | WP_048967419.1 | DUF4231 domain-containing protein | - |
| HHJ21_RS03995 () | 871846..872937 | + | 1092 | WP_001027109.1 | nucleoid-associated protein | - |
| HHJ21_RS04000 () | 872946..873935 | + | 990 | WP_001003786.1 | (p)ppGpp synthetase | - |
| HHJ21_RS04005 () | 874117..875442 | - | 1326 | WP_001103161.1 | DNA-protecting protein DprA | - |
| HHJ21_RS04010 () | 875439..877538 | - | 2100 | WP_001078521.1 | RecQ family ATP-dependent DNA helicase | - |
| HHJ21_RS04015 () | 878329..878940 | - | 612 | WP_000460022.1 | inovirus Gp2 family protein | - |
| HHJ21_RS04020 () | 879268..879651 | - | 384 | WP_071526519.1 | hypothetical protein | - |
| HHJ21_RS04025 () | 879662..880195 | - | 534 | WP_001065873.1 | hypothetical protein | - |
| HHJ21_RS04030 () | 880296..880508 | - | 213 | WP_000202165.1 | AlpA family transcriptional regulator | - |
| HHJ21_RS04035 () | 881802..882860 | + | 1059 | WP_000031617.1 | hypothetical protein | - |
| HHJ21_RS04040 () | 882983..883846 | + | 864 | WP_000747920.1 | GTPase family protein | - |
| HHJ21_RS04045 () | 883942..884766 | + | 825 | WP_000197392.1 | DUF945 domain-containing protein | - |
| HHJ21_RS04050 () | 884975..885685 | + | 711 | WP_000189396.1 | DeoR family transcriptional regulator | - |
| HHJ21_RS04055 () | 885711..886247 | + | 537 | WP_000219796.1 | DUF4339 domain-containing protein | - |
| HHJ21_RS04060 () | 886289..886726 | + | 438 | WP_000853946.1 | hypothetical protein | - |
| HHJ21_RS04065 () | 886793..887203 | + | 411 | WP_000912998.1 | hypothetical protein | - |
| HHJ21_RS04070 () | 887516..887839 | + | 324 | Protein_785 | transposase | - |
| HHJ21_RS04075 () | 887979..889712 | - | 1734 | WP_000275005.1 | AAA family ATPase | - |
| HHJ21_RS04080 () | 890141..891229 | + | 1089 | Protein_787 | IS3 family transposase | - |
| HHJ21_RS04085 () | 891688..892167 | + | 480 | WP_001118831.1 | DNA repair protein RadC | - |
| HHJ21_RS04090 () | 892176..892397 | + | 222 | WP_000691980.1 | DUF987 family protein | - |
| HHJ21_RS04095 () | 892415..892756 | + | 342 | WP_000070398.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| HHJ21_RS04100 () | 892753..893121 | + | 369 | WP_000793497.1 | TA system toxin CbtA family protein | Toxin Detail |
| HHJ21_RS04105 () | 893331..893489 | - | 159 | Protein_792 | integrase | - |
| HHJ21_RS04110 () | 893502..894053 | + | 552 | Protein_793 | SDR family oxidoreductase | - |
| HHJ21_RS04115 () | 894221..894499 | + | 279 | WP_024177850.1 | hypothetical protein | - |
| HHJ21_RS04120 () | 895190..896074 | - | 885 | WP_001119038.1 | HTH-type transcriptional regulator ArgP | VF |
| HHJ21_RS04125 () | 896340..897398 | + | 1059 | WP_122986710.1 | alpha/beta hydrolase | - |
| HHJ21_RS04130 () | 897540..898667 | + | 1128 | WP_000171074.1 | MFS transporter | - |
| HHJ21_RS04135 () | 898847..899803 | - | 957 | WP_000122396.1 | molybdenum cofactor insertion chaperone PaoD | - |
| HHJ21_RS04140 () | 899813..902011 | - | 2199 | WP_000667055.1 | aldehyde oxidoreductase molybdenum-binding subunit PaoC | - |
| HHJ21_RS04145 () | 902008..902964 | - | 957 | WP_000643316.1 | aldehyde oxidoreductase FAD-binding subunit PaoB | - |
| HHJ21_RS04150 () | 902961..903650 | - | 690 | WP_000070677.1 | aldehyde dehydrogenase iron-sulfur subunit | - |
| HHJ21_RS04155 () | 904057..904671 | + | 615 | WP_001019920.1 | YagU family protein | - |
| HHJ21_RS04160 () | 904920..905249 | - | 330 | WP_001303809.1 | YkgJ family cysteine cluster protein | - |
| HHJ21_RS04165 () | 905562..906272 | - | 711 | WP_001307601.1 | hypothetical protein | VF |
| HHJ21_RS04170 () | 906241..907884 | - | 1644 | WP_001265646.1 | hypothetical protein | VF |
| HHJ21_RS04175 () | 907874..910399 | - | 2526 | WP_001131055.1 | hypothetical protein | VF |
| HHJ21_RS04180 () | 910425..911093 | - | 669 | WP_001366495.1 | hypothetical protein | VF |
| HHJ21_RS04185 () | 911150..911737 | - | 588 | WP_000730972.1 | hypothetical protein | VF |
| HHJ21_RS04190 () | 911812..912354 | - | 543 | WP_001366466.1 | hypothetical protein | VF |
| HHJ21_RS04195 () | 913438..913578 | - | 141 | WP_000866436.1 | type B 50S ribosomal protein L36 | - |
| HHJ21_RS04200 () | 913578..913841 | - | 264 | WP_000803998.1 | type B 50S ribosomal protein L31 | - |
| HHJ21_RS04205 () | 914193..914294 | - | 102 | WP_000662256.1 | hypothetical protein | - |
| HHJ21_RS04210 () | 914767..915909 | - | 1143 | WP_000182350.1 | NADH-dependent flavin oxidoreductase | - |
| HHJ21_RS04215 () | 916154..917074 | - | 921 | WP_000860039.1 | alpha/beta hydrolase | - |
| HHJ21_RS04220 () | 917231..918157 | + | 927 | WP_001307603.1 | HTH-type transcriptional regulator ArgP | VF |
| HHJ21_RS04225 () | 918358..919251 | + | 894 | WP_000910715.1 | HTH-type transcriptional regulator ArgP | VF |
| HHJ21_RS04230 () | 919282..920271 | - | 990 | WP_001172292.1 | aldo/keto reductase | - |
| HHJ21_RS04235 () | 920298..921149 | - | 852 | WP_001174466.1 | aldo/keto reductase | - |
| HHJ21_RS04240 () | 921715..925968 | + | 4254 | WP_000092572.1 | hypothetical protein | VF |
| HHJ21_RS04245 () | 926089..926946 | - | 858 | WP_001375817.1 | HTH-type transcriptional activator RhaR | VF |
| HHJ21_RS04250 () | 927195..928064 | + | 870 | WP_001366477.1 | aldo/keto reductase | - |
| HHJ21_RS04255 () | 928224..928817 | - | 594 | WP_001361806.1 | reactive chlorine species resistance protein RclC | - |
| HHJ21_RS04260 () | 928829..929065 | - | 237 | WP_000474077.1 | DUF1471 domain-containing protein | - |
| HHJ21_RS04265 () | 929174..930499 | - | 1326 | WP_001046303.1 | pyridine nucleotide-disulfide oxidoreductase | - |
| HHJ21_RS04270 () | 930726..931580 | + | 855 | WP_001366496.1 | DNA-binding transcriptional regulator RclR | - |
| HHJ21_RS04275 () | 932107..932826 | + | 720 | WP_001102113.1 | (Fe-S)-binding protein | - |
| HHJ21_RS04280 () | 932837..934264 | + | 1428 | WP_000023924.1 | iron-sulfur cluster-binding protein | - |
| HHJ21_RS04285 () | 934257..934952 | + | 696 | WP_001366460.1 | lactate utilization protein C | - |
| HHJ21_RS04290 () | 935193..935861 | - | 669 | WP_000003139.1 | hypothetical protein | - |
| HHJ21_RS04295 () | 936072..937742 | - | 1671 | WP_001159137.1 | choline dehydrogenase | - |
| HHJ21_RS04300 () | 937756..939228 | - | 1473 | WP_000089094.1 | betaine-aldehyde dehydrogenase | - |
| HHJ21_RS04305 () | 939242..939829 | - | 588 | WP_001305448.1 | transcriptional regulator BetI | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|