MGE detailed information
MGE type: Prophage MGE length: 40614 bp
Accession: NZ_CP051753 Location: 2567185..2607798 Organism: Escherichia coli strain SCU-102 Replicon: chromosome
Accession: NZ_CP051753 Location: 2567185..2607798 Organism: Escherichia coli strain SCU-102 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HHJ21_RS12100 () | 2563040..2563840 | + | 801 | WP_000406926.1 | PTS mannose transporter subunit IIC | - |
| HHJ21_RS12105 () | 2563853..2564704 | + | 852 | WP_000228655.1 | PTS mannose transporter subunit IID | - |
| HHJ21_RS12110 () | 2564759..2565217 | + | 459 | WP_000156255.1 | DUF986 family protein | - |
| HHJ21_RS12115 () | 2565647..2566213 | + | 567 | WP_001296134.1 | manganese efflux pump MntP | - |
| HHJ21_RS12120 () | 2566210..2567019 | - | 810 | WP_000010123.1 | 23S rRNA (guanine(745)-N(1))-methyltransferase | - |
| HHJ21_RS12125 () | 2567185..2567394 | - | 210 | WP_001062678.1 | transcription antiterminator/RNA stability regulator CspE | - |
| HHJ21_RS12130 () | 2567407..2567550 | - | 144 | WP_001295496.1 | YobF family protein | - |
| HHJ21_RS12135 () | 2568220..2568507 | - | 288 | WP_001006866.1 | YebO family protein | - |
| HHJ21_RS12140 () | 2568582..2568725 | - | 144 | WP_000714550.1 | PhoP/PhoQ regulator MgrB | - |
| HHJ21_RS12145 () | 2568884..2569123 | + | 240 | WP_001211011.1 | hypothetical protein | - |
| HHJ21_RS12150 () | 2569267..2570058 | - | 792 | WP_001262179.1 | DNA-binding transcriptional regulator KdgR | - |
| HHJ21_RS12155 () | 2570235..2571608 | + | 1374 | WP_001366325.1 | MFS transporter | - |
| HHJ21_RS12160 () | 2571716..2572174 | - | 459 | WP_000526135.1 | IS200-IS605 family transposase IS200C | Transposase |
| HHJ21_RS12165 () | 2572365..2573246 | - | 882 | WP_000984517.1 | protease HtpX | - |
| HHJ21_RS12170 () | 2573438..2575486 | - | 2049 | WP_001055785.1 | carboxy terminal-processing peptidase | - |
| HHJ21_RS12175 () | 2575506..2576204 | - | 699 | WP_000431370.1 | RNA chaperone ProQ | - |
| HHJ21_RS12180 () | 2576301..2576798 | - | 498 | WP_001043884.1 | L-methionine (R)-S-oxide reductase | - |
| HHJ21_RS12185 () | 2576928..2578211 | + | 1284 | WP_001328843.1 | membrane integrity lipid transport subunit YebS | - |
| HHJ21_RS12190 () | 2578180..2580813 | + | 2634 | WP_001306757.1 | hypothetical protein | VF |
| HHJ21_RS12195 () | 2580893..2582332 | + | 1440 | WP_001366375.1 | 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF | - |
| HHJ21_RS12200 () | 2582450..2582686 | + | 237 | WP_001295499.1 | DUF1480 family protein | - |
| HHJ21_RS12205 () | 2582791..2582982 | + | 192 | WP_001296140.1 | YebW family protein | - |
| HHJ21_RS12210 () | 2582983..2583639 | - | 657 | WP_000812730.1 | protein-serine/threonine phosphatase | - |
| - () | 2583736..2584004 | + | 269 | - | - | Antitoxin Detail |
| - () | 2583774..2583877 | - | 104 | - | - | Toxin Detail |
| HHJ21_RS12215 () | 2584034..2584375 | - | 342 | WP_000976471.1 | YebY family protein | - |
| HHJ21_RS12220 () | 2584388..2585260 | - | 873 | WP_000879330.1 | copper homeostasis membrane protein CopD | - |
| HHJ21_RS12225 () | 2585264..2585638 | - | 375 | WP_000204700.1 | CopC domain-containing protein YobA | - |
| HHJ21_RS12230 () | 2585777..2586007 | + | 231 | WP_000916763.1 | DNA polymerase III subunit theta | - |
| HHJ21_RS12235 () | 2586109..2586765 | + | 657 | WP_000011651.1 | carbon-nitrogen hydrolase family protein | - |
| HHJ21_RS12240 () | 2586789..2587451 | + | 663 | WP_000944256.1 | exodeoxyribonuclease X | - |
| HHJ21_RS12245 () | 2587448..2589508 | - | 2061 | WP_000936963.1 | oligopeptidase B | - |
| HHJ21_RS12250 () | 2589665..2590090 | - | 426 | WP_000064873.1 | IS200-IS605 family transposase ISEc46 | Transposase |
| HHJ21_RS12255 () | 2590147..2591323 | + | 1177 | Protein_2391 | IS200-IS605 family transposase ISEc46 | Transposase |
| HHJ21_RS12260 () | 2591487..2592146 | - | 660 | WP_000024731.1 | tellurite resistance TerB family protein | - |
| HHJ21_RS12265 () | 2592473..2592829 | - | 357 | WP_001295500.1 | protein YebF | - |
| HHJ21_RS12270 () | 2592896..2593186 | - | 291 | WP_000257738.1 | DNA damage-inducible protein YebG | - |
| HHJ21_RS12275 () | 2593320..2594498 | + | 1179 | WP_000173460.1 | formate-dependent phosphoribosylglycinamide formyltransferase | - |
| HHJ21_RS12280 () | 2594553..2595194 | - | 642 | WP_000800512.1 | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | - |
| HHJ21_RS12285 () | 2595231..2597042 | - | 1812 | WP_001069467.1 | phosphogluconate dehydratase | - |
| HHJ21_RS12290 () | 2597277..2598752 | - | 1476 | WP_000301727.1 | glucose-6-phosphate dehydrogenase | - |
| HHJ21_RS12295 () | 2599090..2599959 | + | 870 | WP_001056694.1 | DNA-binding transcriptional regulator HexR | - |
| HHJ21_RS12300 () | 2600087..2601529 | + | 1443 | WP_000091148.1 | pyruvate kinase | - |
| HHJ21_RS12305 () | 2601661..2602632 | - | 972 | WP_000448381.1 | Lipid A biosynthesis myristoyltransferase | VF |
| HHJ21_RS12310 () | 2602752..2604074 | - | 1323 | WP_001184045.1 | murein DD-endopeptidase MepM | - |
| HHJ21_RS12315 () | 2604090..2605022 | - | 933 | WP_011076428.1 | zinc ABC transporter substrate-binding protein ZnuA | - |
| HHJ21_RS12320 () | 2605101..2605856 | + | 756 | WP_000202985.1 | Vitamin B12 import ATP-binding protein BtuD | VF |
| HHJ21_RS12325 () | 2605853..2606638 | + | 786 | WP_000571479.1 | hypothetical protein | VF |
| HHJ21_RS12330 () | 2606788..2607798 | - | 1011 | WP_000568522.1 | Holliday junction branch migration DNA helicase RuvB | - |
| HHJ21_RS12335 () | 2607807..2608418 | - | 612 | WP_000580323.1 | Holliday junction branch migration protein RuvA | - |
| HHJ21_RS12340 () | 2608557..2608622 | - | 66 | WP_072123646.1 | stress response small protein YobI | - |
| HHJ21_RS12345 () | 2608693..2609295 | + | 603 | WP_001024936.1 | YebB family permuted papain-like enzyme | - |
| HHJ21_RS12350 () | 2609297..2609818 | - | 522 | WP_001295503.1 | crossover junction endodeoxyribonuclease RuvC | - |
| HHJ21_RS12355 () | 2609853..2610593 | - | 741 | WP_000907234.1 | YebC/PmpR family DNA-binding transcriptional regulator | - |
| HHJ21_RS12360 () | 2610622..2611074 | - | 453 | WP_001308712.1 | dihydroneopterin triphosphate diphosphatase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|