MGE detailed information
MGE type: Genomic_island MGE length: 20028 bp
Accession: NZ_CP051751 Location: 4269712..4289739 Organism: Escherichia coli strain SCU-301 Replicon: chromosome
Accession: NZ_CP051751 Location: 4269712..4289739 Organism: Escherichia coli strain SCU-301 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HHJ43_RS20375 () | 4265032..4265934 | - | 903 | WP_097415200.1 | type 1 fimbria D-mannose specific adhesin FimH | - |
| HHJ43_RS20380 () | 4265954..4266457 | - | 504 | WP_000870577.1 | type 1 fimbria minor subunit FimG | - |
| HHJ43_RS20385 () | 4266470..4267000 | - | 531 | WP_001244821.1 | type 1 fimbria minor subunit FimF | - |
| HHJ43_RS20390 () | 4267010..4269646 | - | 2637 | WP_000120954.1 | fimbrial usher FimD | - |
| HHJ43_RS20395 () | 4269712..4270437 | - | 726 | WP_000066559.1 | hypothetical protein | VF |
| HHJ43_RS20400 () | 4270474..4271013 | - | 540 | WP_000824099.1 | hypothetical protein | VF |
| HHJ43_RS20405 () | 4271078..4271626 | - | 549 | WP_001357506.1 | hypothetical protein | VF |
| HHJ43_RS20410 () | 4272107..4272703 | - | 597 | WP_000044708.1 | Tyrosine recombinase XerC | VF |
| HHJ43_RS20415 () | 4273181..4273783 | - | 603 | WP_000790574.1 | Tyrosine recombinase XerC | VF |
| HHJ43_RS20420 () | 4275249..4275965 | + | 717 | WP_001519414.1 | N-acetylneuraminic acid outer membrane channel NanC | - |
| HHJ43_RS20425 () | 4275985..4277091 | + | 1107 | WP_001298082.1 | N-acetylneuraminate epimerase | - |
| HHJ43_RS20430 () | 4277156..4278136 | + | 981 | WP_000991425.1 | 9-O-acetyl-N-acetylneuraminic acid deacetylase | - |
| HHJ43_RS20435 () | 4278719..4279960 | - | 1242 | Protein_4000 | helicase YjhR | - |
| HHJ43_RS20440 () | 4280023..4280322 | + | 300 | WP_001519304.1 | GNAT family N-acetyltransferase | - |
| HHJ43_RS20445 () | 4280699..4280956 | + | 258 | WP_001054376.1 | hypothetical protein | Toxin Detail |
| HHJ43_RS20450 () | 4280968..4281519 | + | 552 | WP_001519303.1 | N-acetyltransferase | Antitoxin Detail |
| HHJ43_RS20455 () | 4281571..4281732 | + | 162 | WP_001519302.1 | hypothetical protein | - |
| HHJ43_RS20460 () | 4281769..4282317 | + | 549 | WP_001519301.1 | hypothetical protein | - |
| HHJ43_RS20465 () | 4282444..4282704 | + | 261 | WP_000084876.1 | hypothetical protein | - |
| HHJ43_RS24140 () | 4282742..4282858 | + | 117 | Protein_4007 | VOC family protein | - |
| HHJ43_RS20470 () | 4283103..4284224 | + | 1122 | WP_000010833.1 | M42 family metallopeptidase | - |
| HHJ43_RS20475 () | 4284221..4284499 | + | 279 | WP_000722973.1 | PTS sugar transporter subunit IIB | - |
| HHJ43_RS20480 () | 4284511..4285824 | + | 1314 | WP_001519300.1 | galactitol-specific PTS transporter subunit IIC | - |
| HHJ43_RS20485 () | 4285837..4286643 | + | 807 | WP_000118626.1 | BtpA family protein SgcQ | - |
| HHJ43_RS20490 () | 4286774..4287205 | + | 432 | WP_000606405.1 | PTS sugar transporter subunit IIA | - |
| HHJ43_RS20495 () | 4287217..4287849 | + | 633 | WP_000600624.1 | ribulose-phosphate 3 epimerase family protein | - |
| HHJ43_RS20500 () | 4287866..4288648 | + | 783 | WP_000082779.1 | DeoR/GlpR family DNA-binding transcription regulator | - |
| HHJ43_RS20505 () | 4288951..4289739 | + | 789 | WP_000251800.1 | IclR family transcriptional regulator | - |
| HHJ43_RS20510 () | 4289744..4290649 | + | 906 | WP_000714563.1 | dihydrodipicolinate synthase family protein | - |
| HHJ43_RS20515 () | 4290660..4292627 | + | 1968 | WP_000116327.1 | xylonate dehydratase YjhG | - |
| HHJ43_RS20520 () | 4292734..4294083 | + | 1350 | WP_001128363.1 | GntP family permease | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|