MGE detailed information
MGE type: Prophage MGE length: 60556 bp
Accession: NZ_CP051744 Location: 3830000..3890555 Organism: Escherichia coli strain SCU-484 Replicon: chromosome
Accession: NZ_CP051744 Location: 3830000..3890555 Organism: Escherichia coli strain SCU-484 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HHJ53_RS18300 () | 3828102..3828953 | + | 852 | WP_001174453.1 | aldo/keto reductase | - |
| HHJ53_RS18305 () | 3828980..3829969 | + | 990 | WP_001172293.1 | aldo/keto reductase | - |
| HHJ53_RS18310 () | 3830000..3830893 | - | 894 | WP_000910711.1 | hypothetical protein | VF |
| HHJ53_RS18315 () | 3831093..3832019 | - | 927 | WP_001304867.1 | hypothetical protein | VF |
| HHJ53_RS18320 () | 3832176..3833096 | + | 921 | WP_000860032.1 | alpha/beta hydrolase | - |
| HHJ53_RS18325 () | 3833268..3834410 | + | 1143 | WP_000182341.1 | NADH-dependent flavin oxidoreductase | - |
| HHJ53_RS18330 () | 3834883..3834984 | + | 102 | WP_000662258.1 | hypothetical protein | - |
| HHJ53_RS18335 () | 3835349..3835612 | + | 264 | WP_000803998.1 | type B 50S ribosomal protein L31 | - |
| HHJ53_RS18340 () | 3835612..3835752 | + | 141 | WP_000866436.1 | type B 50S ribosomal protein L36 | - |
| HHJ53_RS18345 () | 3835822..3836012 | - | 191 | Protein_3587 | hypothetical protein | - |
| HHJ53_RS18350 () | 3836836..3837378 | + | 543 | WP_000389022.1 | hypothetical protein | VF |
| HHJ53_RS18355 () | 3837452..3838039 | + | 588 | WP_000730982.1 | hypothetical protein | VF |
| HHJ53_RS18360 () | 3838096..3838764 | + | 669 | WP_000716404.1 | hypothetical protein | VF |
| HHJ53_RS18365 () | 3838790..3841315 | + | 2526 | WP_001131109.1 | hypothetical protein | VF |
| HHJ53_RS18370 () | 3841305..3842948 | + | 1644 | WP_001265646.1 | hypothetical protein | VF |
| HHJ53_RS18375 () | 3842917..3843627 | + | 711 | WP_001339257.1 | hypothetical protein | VF |
| HHJ53_RS18380 () | 3843940..3844269 | + | 330 | WP_001350214.1 | YkgJ family cysteine cluster protein | - |
| HHJ53_RS18385 () | 3844281..3844444 | - | 164 | Protein_3595 | tail fiber assembly protein | - |
| HHJ53_RS18390 () | 3844518..3845132 | - | 615 | WP_001019923.1 | YagU family protein | - |
| HHJ53_RS18395 () | 3845347..3845532 | - | 186 | WP_000146243.1 | hypothetical protein | - |
| HHJ53_RS18400 () | 3845581..3845739 | + | 159 | Protein_3598 | integrase | - |
| HHJ53_RS18405 () | 3845956..3846649 | - | 694 | Protein_3599 | IS1 family transposase | - |
| HHJ53_RS18410 () | 3847242..3851372 | + | 4131 | WP_001034006.1 | hypothetical protein | VF |
| HHJ53_RS18415 () | 3851528..3852024 | + | 497 | Protein_3601 | MarR family transcriptional regulator | - |
| HHJ53_RS18420 () | 3852459..3852797 | - | 339 | WP_000772639.1 | Arm DNA-binding domain-containing protein | - |
| HHJ53_RS18425 () | 3853166..3853525 | + | 360 | WP_001350215.1 | hypothetical protein | - |
| HHJ53_RS18430 () | 3853518..3854060 | - | 543 | WP_000284450.1 | plasmid pRiA4b ORF-3 family protein | - |
| HHJ53_RS18440 () | 3854664..3854945 | - | 282 | WP_000617443.1 | PerC family transcriptional regulator | - |
| HHJ53_RS18445 () | 3855621..3855806 | + | 186 | WP_001236873.1 | AlpA family phage regulatory protein | - |
| HHJ53_RS18450 () | 3856878..3857576 | - | 699 | WP_000594596.1 | hypothetical protein | - |
| HHJ53_RS18455 () | 3857727..3860447 | - | 2721 | WP_000968283.1 | lytic transglycosylase domain-containing protein | - |
| HHJ53_RS18460 () | 3860444..3861763 | - | 1320 | WP_000246955.1 | phage DNA ejection protein | - |
| HHJ53_RS18465 () | 3861763..3862440 | - | 678 | WP_000909177.1 | hypothetical protein | - |
| HHJ53_RS18470 () | 3862434..3862895 | - | 462 | WP_000420671.1 | DUF2824 family protein | - |
| HHJ53_RS18475 () | 3862912..3863073 | - | 162 | WP_001018524.1 | hypothetical protein | - |
| HHJ53_RS18480 () | 3863668..3866424 | - | 2757 | WP_001244111.1 | TOPRIM and DUF927 domain-containing protein | - |
| HHJ53_RS18485 () | 3866411..3866782 | - | 372 | WP_001208877.1 | hypothetical protein | - |
| HHJ53_RS18490 () | 3866775..3867116 | - | 342 | WP_000628966.1 | hypothetical protein | - |
| HHJ53_RS18495 () | 3867127..3867729 | - | 603 | WP_001058743.1 | hypothetical protein | - |
| HHJ53_RS18500 () | 3867722..3867943 | - | 222 | WP_000181940.1 | hypothetical protein | - |
| HHJ53_RS18505 () | 3867940..3868203 | - | 264 | WP_001024679.1 | hypothetical protein | - |
| HHJ53_RS18510 () | 3868200..3868394 | - | 195 | WP_001065661.1 | hypothetical protein | - |
| HHJ53_RS18515 () | 3868387..3869454 | - | 1068 | WP_000958749.1 | ash family protein | - |
| HHJ53_RS18520 () | 3869448..3869630 | - | 183 | WP_000476150.1 | DUF4222 domain-containing protein | - |
| HHJ53_RS18525 () | 3869623..3870456 | - | 834 | WP_001019374.1 | antA/AntB antirepressor family protein | - |
| HHJ53_RS18530 () | 3870469..3870900 | - | 432 | WP_000412531.1 | hypothetical protein | - |
| HHJ53_RS18535 () | 3870900..3871103 | - | 204 | WP_000035054.1 | AlpA family transcriptional regulator | - |
| HHJ53_RS18540 () | 3871531..3872745 | - | 1215 | WP_000772643.1 | hypothetical protein ; Integrase | Integrase |
| HHJ53_RS18550 () | 3873101..3874354 | - | 1254 | WP_000893298.1 | glutamate-5-semialdehyde dehydrogenase | - |
| HHJ53_RS18555 () | 3874366..3875469 | - | 1104 | WP_001285288.1 | glutamate 5-kinase | - |
| HHJ53_RS18560 () | 3875758..3876813 | + | 1056 | WP_000749898.1 | phosphoporin PhoE | - |
| HHJ53_RS18565 () | 3876852..3877253 | - | 402 | WP_000174684.1 | sigma factor-binding protein Crl | - |
| HHJ53_RS18570 () | 3877311..3878555 | - | 1245 | WP_000189573.1 | esterase FrsA | - |
| - () | 3877971..3878051 | - | 81 | NuclAT_4 | - | - |
| - () | 3877971..3878051 | - | 81 | NuclAT_4 | - | - |
| - () | 3877971..3878051 | - | 81 | NuclAT_4 | - | - |
| - () | 3877971..3878051 | - | 81 | NuclAT_4 | - | - |
| HHJ53_RS18575 () | 3878647..3879105 | - | 459 | WP_001291991.1 | xanthine phosphoribosyltransferase | - |
| HHJ53_RS18580 () | 3879366..3880823 | + | 1458 | WP_001292999.1 | cytosol nonspecific dipeptidase | - |
| HHJ53_RS18585 () | 3880880..3881494 | - | 615 | WP_000602123.1 | peptide chain release factor H | - |
| HHJ53_RS18590 () | 3881491..3882630 | - | 1140 | WP_000521578.1 | RNA ligase RtcB family protein | - |
| HHJ53_RS18595 () | 3882820..3883272 | - | 453 | WP_001059897.1 | GNAT family N-acetyltransferase | - |
| HHJ53_RS18600 () | 3883282..3883680 | - | 399 | WP_001263501.1 | type II toxin-antitoxin system mRNA interferase toxin YafO | Toxin Detail |
| HHJ53_RS18605 () | 3883683..3883976 | - | 294 | WP_000554755.1 | type I toxin-antitoxin system antitoxin YafN | Antitoxin Detail |
| HHJ53_RS18610 () | 3884028..3885080 | - | 1053 | WP_000691316.1 | DNA polymerase IV | - |
| HHJ53_RS18615 () | 3885273..3886182 | - | 910 | Protein_3639 | helix-turn-helix domain-containing protein | - |
| HHJ53_RS18620 () | 3886773..3887066 | + | 294 | WP_000896590.1 | hypothetical protein | - |
| HHJ53_RS18625 () | 3887435..3888007 | + | 573 | WP_000086540.1 | Tn3 family transposase TnpR_ISSba14 | Transposase |
| HHJ53_RS18630 () | 3888011..3888973 | - | 963 | WP_000231497.1 | hypothetical protein | - |
| HHJ53_RS18635 () | 3889011..3890555 | - | 1545 | WP_000758648.1 | hypothetical protein ; Integrase | Integrase |
| HHJ53_RS18640 () | 3890710..3891633 | - | 924 | WP_001232551.1 | putative lateral flagellar export/assembly protein LafU | - |
| HHJ53_RS18645 () | 3891636..3892499 | - | 864 | WP_001169519.1 | flagellar motor stator protein MotA | - |
| HHJ53_RS18650 () | 3892512..3893231 | - | 720 | WP_000938737.1 | FliA/WhiG family RNA polymerase sigma factor | - |
| HHJ53_RS18655 () | 3893251..3893718 | - | 468 | WP_000725264.1 | flagellar basal body-associated FliL family protein | - |
| HHJ53_RS18660 () | 3893726..3894787 | - | 1062 | WP_001067485.1 | flagellar hook-length control protein FliK | - |
| HHJ53_RS18665 () | 3894784..3895095 | - | 312 | WP_000415000.1 | hypothetical protein | - |
| HHJ53_RS18670 () | 3895100..3895492 | - | 393 | WP_000285321.1 | flagellar export chaperone FliS | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|