MGE detailed information
MGE type: IScluster/Tn MGE length: 18571 bp
Accession: NZ_CP051728 Location: 63421..81991 Organism: Escherichia coli strain SCU-111 Replicon: plasmid pSCU-111-1
Accession: NZ_CP051728 Location: 63421..81991 Organism: Escherichia coli strain SCU-111 Replicon: plasmid pSCU-111-1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HHJ28_RS24315 () | 58711..59043 | - | 333 | WP_211201815.1 | pilus protein | - |
| HHJ28_RS23105 () | 59526..60047 | + | 522 | WP_169062084.1 | single-stranded DNA-binding protein | - |
| HHJ28_RS23110 () | 60110..60343 | + | 234 | WP_000005990.1 | DUF905 family protein | - |
| HHJ28_RS23115 () | 60407..62365 | + | 1959 | WP_169062085.1 | ParB/RepB/Spo0J family partition protein | - |
| HHJ28_RS23120 () | 62420..62854 | + | 435 | WP_000845926.1 | conjugation system SOS inhibitor PsiB | - |
| HHJ28_RS23125 () | 62851..63336 | + | 486 | Protein_67 | plasmid SOS inhibition protein A | - |
| HHJ28_RS23130 () | 63421..64443 | + | 1023 | WP_000255956.1 | IS21 family transposase IS100kyp | Transposase |
| HHJ28_RS23135 () | 64440..65222 | + | 783 | WP_097748551.1 | IS21 family transposase IS100kyp | Transposase |
| HHJ28_RS23140 () | 65290..66378 | + | 1089 | Protein_70 | Tn3 family transposase TnpA_TnEc1 | Transposase |
| HHJ28_RS23145 () | 66378..66557 | + | 180 | Protein_71 | Serine protease pet autotransporter | VF |
| HHJ28_RS23150 () | 66663..67165 | - | 503 | Protein_72 | hypothetical protein | VF |
| HHJ28_RS24320 () | 67160..67652 | - | 493 | Protein_73 | transposase | - |
| HHJ28_RS23155 () | 68017..68214 | + | 198 | WP_169062086.1 | toxin-antitoxin system protein | - |
| HHJ28_RS23160 () | 68728..68892 | - | 165 | WP_169062087.1 | DUF1378 family protein | - |
| HHJ28_RS23165 () | 69136..69405 | - | 270 | Protein_76 | transposase | - |
| HHJ28_RS24325 () | 69540..70494 | + | 955 | Protein_77 | IS3 family transposase IS629 | Transposase |
| HHJ28_RS23175 () | 70492..71241 | + | 750 | Protein_78 | IS21 family transposase IS21 | Transposase |
| HHJ28_RS23180 () | 71263..71721 | + | 459 | Protein_79 | IS21 family transposase IS21 | Transposase |
| HHJ28_RS23185 () | 71893..72078 | - | 186 | Protein_80 | IS66 family insertion sequence element accessory protein TnpB | - |
| HHJ28_RS23190 () | 72352..72729 | - | 378 | Protein_81 | IS110 family transposase | - |
| HHJ28_RS23195 () | 72761..74191 | - | 1431 | Protein_82 | IS66 family transposase ISCro1 | Transposase |
| HHJ28_RS23200 () | 74194..74781 | + | 588 | Protein_83 | IS91 family transposase ISMno23 | Transposase |
| HHJ28_RS23205 () | 75508..75978 | - | 471 | WP_169062142.1 | helix-turn-helix transcriptional regulator | - |
| HHJ28_RS23210 () | 77175..77426 | + | 252 | WP_169062088.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| HHJ28_RS23215 () | 77423..77710 | + | 288 | WP_169062089.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| HHJ28_RS23220 () | 78259..78336 | + | 78 | Protein_87 | IS66 family insertion sequence element accessory protein TnpB | - |
| HHJ28_RS23225 () | 78336..78474 | + | 139 | Protein_88 | IS21 family transposase ISSso4 | Transposase |
| HHJ28_RS23230 () | 78569..79107 | - | 539 | Protein_89 | IS21 family transposase | - |
| HHJ28_RS23235 () | 79201..80367 | + | 1167 | WP_169062090.1 | plasmid-partitioning protein SopA | - |
| HHJ28_RS23240 () | 80367..81338 | + | 972 | WP_169062091.1 | ParB/RepB/Spo0J family plasmid partition protein | - |
| HHJ28_RS23245 () | 82160..82633 | - | 474 | WP_169062092.1 | DUF2919 family protein | - |
| HHJ28_RS23250 () | 82630..84546 | - | 1917 | WP_169062143.1 | cobalt ABC transporter permease | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|