MGE detailed information
MGE type: Genomic_island MGE length: 20026 bp
Accession: NZ_CP051727 Location: 4052587..4072612 Organism: Escherichia coli strain SCU-111 Replicon: chromosome
Accession: NZ_CP051727 Location: 4052587..4072612 Organism: Escherichia coli strain SCU-111 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HHJ28_RS19305 () | 4047907..4048809 | - | 903 | WP_000832236.1 | type 1 fimbria D-mannose specific adhesin FimH | - |
| HHJ28_RS19310 () | 4048829..4049332 | - | 504 | WP_000870577.1 | type 1 fimbria minor subunit FimG | - |
| HHJ28_RS19315 () | 4049345..4049875 | - | 531 | WP_001244821.1 | type 1 fimbria minor subunit FimF | - |
| HHJ28_RS19320 () | 4049885..4052521 | - | 2637 | WP_000120954.1 | fimbrial usher FimD | - |
| HHJ28_RS19325 () | 4052587..4053312 | - | 726 | WP_000066559.1 | hypothetical protein | VF |
| HHJ28_RS19330 () | 4053349..4053888 | - | 540 | WP_000824099.1 | hypothetical protein | VF |
| HHJ28_RS19335 () | 4053953..4054501 | - | 549 | WP_001357506.1 | hypothetical protein | VF |
| HHJ28_RS19340 () | 4054982..4055578 | - | 597 | WP_000044708.1 | Tyrosine recombinase XerC | VF |
| HHJ28_RS19345 () | 4056056..4056658 | - | 603 | WP_001519310.1 | Tyrosine recombinase XerC | VF |
| HHJ28_RS19350 () | 4058122..4058838 | + | 717 | WP_001519309.1 | N-acetylneuraminic acid outer membrane channel NanC | - |
| HHJ28_RS19355 () | 4058858..4059964 | + | 1107 | WP_135149994.1 | N-acetylneuraminate epimerase | - |
| HHJ28_RS19360 () | 4060029..4061009 | + | 981 | WP_001519307.1 | transposase | - |
| HHJ28_RS19365 () | 4061592..4062833 | - | 1242 | Protein_3790 | helicase YjhR | - |
| HHJ28_RS19370 () | 4062896..4063195 | + | 300 | WP_001519304.1 | GNAT family N-acetyltransferase | - |
| HHJ28_RS19375 () | 4063572..4063829 | + | 258 | WP_001054376.1 | hypothetical protein | Toxin Detail |
| HHJ28_RS19380 () | 4063841..4064392 | + | 552 | WP_001519303.1 | N-acetyltransferase | Antitoxin Detail |
| HHJ28_RS19385 () | 4064444..4064605 | + | 162 | WP_001519302.1 | hypothetical protein | - |
| HHJ28_RS19390 () | 4064642..4065190 | + | 549 | WP_001519301.1 | hypothetical protein | - |
| HHJ28_RS19395 () | 4065317..4065577 | + | 261 | WP_000084876.1 | hypothetical protein | - |
| HHJ28_RS24305 () | 4065615..4065731 | + | 117 | Protein_3797 | VOC family protein | - |
| HHJ28_RS19400 () | 4065976..4067097 | + | 1122 | WP_000010833.1 | M42 family metallopeptidase | - |
| HHJ28_RS19405 () | 4067094..4067372 | + | 279 | WP_000722973.1 | PTS sugar transporter subunit IIB | - |
| HHJ28_RS19410 () | 4067384..4068697 | + | 1314 | WP_001519300.1 | galactitol-specific PTS transporter subunit IIC | - |
| HHJ28_RS19415 () | 4068710..4069516 | + | 807 | WP_000118626.1 | BtpA family protein SgcQ | - |
| HHJ28_RS19420 () | 4069647..4070078 | + | 432 | WP_000606405.1 | PTS sugar transporter subunit IIA | - |
| HHJ28_RS19425 () | 4070090..4070722 | + | 633 | WP_000600624.1 | ribulose-phosphate 3 epimerase family protein | - |
| HHJ28_RS19430 () | 4070739..4071521 | + | 783 | WP_000082779.1 | DeoR/GlpR family DNA-binding transcription regulator | - |
| HHJ28_RS19435 () | 4071824..4072612 | + | 789 | WP_000251800.1 | IclR family transcriptional regulator | - |
| HHJ28_RS19440 () | 4072617..4073522 | + | 906 | WP_000714563.1 | dihydrodipicolinate synthase family protein | - |
| HHJ28_RS19445 () | 4073533..4075500 | + | 1968 | WP_000116327.1 | xylonate dehydratase YjhG | - |
| HHJ28_RS19450 () | 4075607..4076956 | + | 1350 | WP_001128363.1 | GntP family permease | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|