MGE detailed information
MGE type: Prophage MGE length: 28331 bp
Accession: NZ_CP051716 Location: 3556497..3584827 Organism: Escherichia coli strain SCU-118 Replicon: chromosome
Accession: NZ_CP051716 Location: 3556497..3584827 Organism: Escherichia coli strain SCU-118 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HHJ32_RS16995 () | 3552143..3552481 | + | 339 | Protein_3320 | LysR family transcriptional regulator | - |
| HHJ32_RS17000 () | 3552892..3553101 | + | 210 | Protein_3321 | integrase core domain-containing protein | - |
| HHJ32_RS17005 () | 3553143..3553886 | - | 744 | WP_000246050.1 | AraC family transcriptional regulator | - |
| HHJ32_RS17010 () | 3554711..3555484 | + | 774 | WP_000355484.1 | hypothetical protein | - |
| HHJ32_RS17015 () | 3555561..3555974 | - | 414 | WP_001104934.1 | hypothetical protein | - |
| HHJ32_RS17020 () | 3555974..3556513 | - | 540 | Protein_3325 | carbohydrate kinase | - |
| HHJ32_RS17025 () | 3556509..3557039 | - | 531 | Protein_3326 | DNA circularization N-terminal domain-containing protein | - |
| HHJ32_RS17030 () | 3557101..3557631 | - | 531 | WP_000679479.1 | hypothetical protein | - |
| HHJ32_RS17035 () | 3557723..3559555 | - | 1833 | WP_047611060.1 | phage tail tape measure protein | - |
| HHJ32_RS17040 () | 3559697..3559864 | - | 168 | Protein_3329 | phage tail assembly protein | - |
| HHJ32_RS17045 () | 3559866..3560270 | - | 405 | Protein_3330 | phage portal protein | - |
| HHJ32_RS17050 () | 3560288..3560554 | - | 267 | Protein_3331 | HNH endonuclease | - |
| HHJ32_RS17055 () | 3561079..3561372 | + | 294 | WP_000738423.1 | increased serum survival lipoprotein Iss | - |
| HHJ32_RS17060 () | 3561463..3561645 | - | 183 | WP_001228695.1 | prophage lysis lipoprotein RzoD | - |
| HHJ32_RS17065 () | 3561862..3562359 | - | 498 | WP_001135277.1 | lysozyme RrrD | - |
| HHJ32_RS17070 () | 3562359..3562574 | - | 216 | WP_000839596.1 | phage lysis protein EssD | - |
| HHJ32_RS17075 () | 3563147..3564244 | + | 1098 | WP_000737280.1 | porin | - |
| HHJ32_RS17080 () | 3564434..3564817 | - | 384 | WP_001204791.1 | antitermination protein QuuD | - |
| HHJ32_RS17085 () | 3564903..3565043 | - | 141 | WP_000971058.1 | YlcG family protein | - |
| HHJ32_RS17090 () | 3565040..3565402 | - | 363 | WP_001099705.1 | crossover junction endodeoxyribonuclease RusA | - |
| HHJ32_RS17095 () | 3565422..3565616 | - | 195 | WP_000950977.1 | hypothetical protein | - |
| HHJ32_RS17100 () | 3565609..3565950 | - | 342 | WP_000386643.1 | DUF2591 family protein | - |
| HHJ32_RS17105 () | 3565953..3566129 | - | 177 | WP_001254223.1 | NinE family protein | - |
| HHJ32_RS17110 () | 3566126..3566653 | - | 528 | WP_000153280.1 | phage N-6-adenine-methyltransferase | - |
| HHJ32_RS17115 () | 3566650..3566862 | - | 213 | Protein_3344 | recombination protein NinB | - |
| HHJ32_RS17120 () | 3566801..3567016 | + | 216 | WP_045178241.1 | DUF1317 family protein | - |
| HHJ32_RS17125 () | 3566989..3567180 | + | 192 | WP_000548531.1 | DUF1382 family protein | - |
| HHJ32_RS17130 () | 3567191..3567472 | + | 282 | WP_077250124.1 | cell division protein ZapA | - |
| HHJ32_RS17135 () | 3567571..3567789 | + | 219 | WP_000763385.1 | TraR/DksA family transcriptional regulator | - |
| HHJ32_RS17140 () | 3567837..3568115 | + | 279 | WP_000488407.1 | DUF4222 domain-containing protein | - |
| HHJ32_RS17145 () | 3568314..3569477 | + | 1164 | WP_000051905.1 | Beta sliding clamp ; Integrase | Integrase |
| HHJ32_RS17155 () | 3569682..3570935 | - | 1254 | WP_000893278.1 | glutamate-5-semialdehyde dehydrogenase | - |
| HHJ32_RS17160 () | 3570947..3572050 | - | 1104 | WP_001285288.1 | glutamate 5-kinase | - |
| HHJ32_RS17165 () | 3572338..3573393 | + | 1056 | WP_000749867.1 | phosphoporin PhoE | - |
| HHJ32_RS17170 () | 3573432..3573833 | - | 402 | WP_000174677.1 | sigma factor-binding protein Crl | - |
| HHJ32_RS17175 () | 3573891..3575135 | - | 1245 | WP_000189532.1 | esterase FrsA | - |
| - () | 3574551..3574631 | - | 81 | NuclAT_11 | - | - |
| - () | 3574551..3574631 | - | 81 | NuclAT_11 | - | - |
| - () | 3574551..3574631 | - | 81 | NuclAT_11 | - | - |
| - () | 3574551..3574631 | - | 81 | NuclAT_11 | - | - |
| HHJ32_RS17180 () | 3575227..3575685 | - | 459 | WP_001291990.1 | xanthine phosphoribosyltransferase | - |
| HHJ32_RS17185 () | 3575946..3577403 | + | 1458 | WP_001292994.1 | cytosol nonspecific dipeptidase | - |
| HHJ32_RS17190 () | 3577460..3577981 | - | 522 | Protein_3358 | peptide chain release factor H | - |
| HHJ32_RS17195 () | 3577977..3578183 | - | 207 | Protein_3359 | RtcB family protein | - |
| HHJ32_RS17200 () | 3578501..3578953 | - | 453 | WP_001059892.1 | GNAT family N-acetyltransferase | - |
| HHJ32_RS17205 () | 3578963..3579361 | - | 399 | WP_001263489.1 | type II toxin-antitoxin system mRNA interferase toxin YafO | Toxin Detail |
| HHJ32_RS17210 () | 3579364..3579657 | - | 294 | WP_000554758.1 | type I toxin-antitoxin system antitoxin YafN | Antitoxin Detail |
| HHJ32_RS17215 () | 3579709..3580764 | - | 1056 | WP_001226164.1 | DNA polymerase IV | - |
| HHJ32_RS17220 () | 3580835..3581620 | - | 786 | WP_000207552.1 | hypothetical protein | VF |
| HHJ32_RS17225 () | 3581592..3583304 | + | 1713 | Protein_3365 | hypothetical protein | VF |
| HHJ32_RS17230 () | 3583528..3584025 | - | 498 | WP_000006255.1 | REP-associated tyrosine transposase RayT | - |
| HHJ32_RS17235 () | 3584201..3584950 | - | 750 | WP_000056849.1 | LL-diaminopimelate aminotransferase | VF |
| HHJ32_RS17240 () | 3585160..3585420 | + | 261 | WP_000729703.1 | type II toxin-antitoxin system antitoxin DinJ | - |
| HHJ32_RS17245 () | 3585423..3585701 | + | 279 | WP_047609283.1 | type II toxin-antitoxin system mRNA interferase toxin YafQ | - |
| HHJ32_RS17250 () | 3585857..3586597 | + | 741 | WP_001225679.1 | murein L,D-transpeptidase | - |
| HHJ32_RS17255 () | 3586568..3587335 | - | 768 | WP_000333380.1 | class II glutamine amidotransferase | - |
| HHJ32_RS17260 () | 3587541..3588119 | - | 579 | WP_000284050.1 | D-sedoheptulose 7-phosphate isomerase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|