MGE detailed information
MGE type: Genomic_island MGE length: 20355 bp
Accession: NZ_CP051714 Location: 3714636..3734990 Organism: Escherichia coli strain SCU-122 Replicon: chromosome
Accession: NZ_CP051714 Location: 3714636..3734990 Organism: Escherichia coli strain SCU-122 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HHJ35_RS17745 () | 3710001..3710459 | - | 459 | WP_001291988.1 | xanthine phosphoribosyltransferase | - |
| HHJ35_RS17750 () | 3710720..3712177 | + | 1458 | WP_001292999.1 | cytosol nonspecific dipeptidase | - |
| HHJ35_RS17755 () | 3712234..3712848 | - | 615 | WP_000602123.1 | peptide chain release factor H | - |
| HHJ35_RS17760 () | 3712845..3713984 | - | 1140 | WP_000521577.1 | RNA ligase RtcB family protein | - |
| HHJ35_RS17765 () | 3714174..3714626 | - | 453 | WP_001059895.1 | GNAT family N-acetyltransferase | - |
| HHJ35_RS17770 () | 3714636..3715034 | - | 399 | WP_001263500.1 | type II toxin-antitoxin system mRNA interferase toxin YafO | Toxin Detail |
| HHJ35_RS17775 () | 3715037..3715330 | - | 294 | WP_000554758.1 | type I toxin-antitoxin system antitoxin YafN | Antitoxin Detail |
| HHJ35_RS17780 () | 3715382..3716437 | - | 1056 | WP_001226168.1 | DNA polymerase IV | - |
| HHJ35_RS17785 () | 3716508..3717293 | - | 786 | WP_000207544.1 | Chemotaxis protein LafU | VF |
| HHJ35_RS17790 () | 3717265..3718977 | + | 1713 | Protein_3474 | Flagellar biosynthesis protein FlhA | VF |
| HHJ35_RS17795 () | 3719056..3719214 | + | 159 | WP_014639450.1 | hypothetical protein | - |
| HHJ35_RS17800 () | 3719297..3719794 | - | 498 | WP_001557224.1 | REP-associated tyrosine transposase RayT | - |
| HHJ35_RS17805 () | 3719970..3720719 | - | 750 | WP_000093934.1 | Murein DD-endopeptidase MepH | VF |
| HHJ35_RS17810 () | 3721031..3721771 | + | 741 | WP_001225679.1 | murein L,D-transpeptidase | - |
| HHJ35_RS17815 () | 3721742..3722509 | - | 768 | WP_001331866.1 | class II glutamine amidotransferase | - |
| HHJ35_RS17820 () | 3722714..3723292 | - | 579 | WP_000284050.1 | Phosphoheptose isomerase | VF |
| HHJ35_RS17825 () | 3723532..3725976 | + | 2445 | WP_000973137.1 | Acyl-coenzyme A dehydrogenase | VF |
| HHJ35_RS17830 () | 3726019..3726465 | - | 447 | WP_001308392.1 | Ivy family C-type lysozyme inhibitor | - |
| HHJ35_RS17835 () | 3726646..3727416 | + | 771 | WP_001118042.1 | 2-oxoglutaramate amidase | - |
| HHJ35_RS17840 () | 3727467..3727661 | - | 195 | Protein_3484 | transposase | - |
| HHJ35_RS17845 () | 3727687..3728175 | - | 489 | WP_001298174.1 | integrating conjugative element protein | - |
| HHJ35_RS17850 () | 3728269..3728772 | - | 504 | WP_000227712.1 | hypothetical protein | - |
| HHJ35_RS17855 () | 3729001..3729765 | - | 765 | Protein_3487 | ISAs1 family transposase ISEc1 | Transposase |
| HHJ35_RS17860 () | 3730023..3730313 | - | 291 | WP_000513317.1 | hypothetical protein | - |
| HHJ35_RS17865 () | 3730288..3731727 | - | 1440 | WP_000528852.1 | DUF4150 domain-containing protein | - |
| HHJ35_RS17870 () | 3731720..3732766 | - | 1047 | WP_000571853.1 | DUF2169 domain-containing protein | - |
| HHJ35_RS17875 () | 3732873..3734855 | - | 1983 | WP_000053636.1 | Actin cross-linking toxin VgrG1 | VF |
| HHJ35_RS17880 () | 3735076..3735594 | - | 519 | WP_001142963.1 | Hcp family type VI secretion system effector | - |
| HHJ35_RS17885 () | 3736300..3736803 | + | 504 | WP_000041480.1 | type VI secretion system contractile sheath small subunit | - |
| HHJ35_RS17890 () | 3736826..3738310 | + | 1485 | WP_000111582.1 | type VI secretion system contractile sheath large subunit | - |
| HHJ35_RS17895 () | 3738315..3738740 | + | 426 | WP_000946068.1 | type VI secretion system baseplate subunit TssE | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|