MGE detailed information
MGE type: Genomic_island MGE length: 72823 bp
Accession: NZ_CP051711 Location: 3301345..3374167 Organism: Escherichia coli strain SCU-123 Replicon: chromosome
Accession: NZ_CP051711 Location: 3301345..3374167 Organism: Escherichia coli strain SCU-123 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HHJ36_RS15685 () | 3297751..3298470 | - | 720 | WP_000611291.1 | two-component system response regulator DcuR | - |
| HHJ36_RS15690 () | 3298467..3300098 | - | 1632 | WP_001216482.1 | sensor histidine kinase | - |
| HHJ36_RS15695 () | 3300279..3300509 | + | 231 | WP_000373293.1 | (4Fe-4S)-binding protein | - |
| HHJ36_RS15700 () | 3300521..3300793 | + | 273 | WP_000405647.1 | N-acetyltransferase | - |
| HHJ36_RS15705 () | 3301021..3301317 | + | 297 | WP_001312331.1 | type V toxin-antitoxin system endoribonuclease antitoxin GhoS | - |
| HHJ36_RS15710 () | 3301345..3301518 | + | 174 | WP_001173343.1 | type V toxin-antitoxin system toxin GhoT | - |
| HHJ36_RS15715 () | 3301637..3303154 | - | 1518 | WP_000003806.1 | lysine--tRNA ligase | - |
| HHJ36_RS15720 () | 3303391..3304848 | - | 1458 | WP_000856826.1 | dipeptide/tripeptide permease DtpC | - |
| HHJ36_RS15725 () | 3304907..3307054 | - | 2148 | WP_001296667.1 | lysine decarboxylase CadA | - |
| HHJ36_RS15730 () | 3307134..3308468 | - | 1335 | WP_000092909.1 | cadaverine/lysine antiporter | - |
| HHJ36_RS15735 () | 3308834..3310372 | - | 1539 | WP_001187191.1 | lysine decarboxylation/transport transcriptional activator CadC | - |
| HHJ36_RS15740 () | 3311206..3311766 | - | 561 | Protein_3067 | DUF4942 domain-containing protein | - |
| HHJ36_RS15745 () | 3311851..3312048 | - | 198 | WP_085949158.1 | DUF957 domain-containing protein | - |
| HHJ36_RS15750 () | 3312076..3312273 | - | 198 | Protein_3069 | hypothetical protein | - |
| HHJ36_RS15755 () | 3312270..3312647 | - | 378 | WP_000854820.1 | type IV toxin-antitoxin system toxin CbtA | Toxin Detail |
| HHJ36_RS15760 () | 3312736..3313104 | - | 369 | WP_001285610.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| HHJ36_RS15765 () | 3313184..3313405 | - | 222 | WP_000692347.1 | DUF987 domain-containing protein | - |
| HHJ36_RS15770 () | 3313492..3313968 | - | 477 | WP_001186193.1 | RadC family protein | - |
| HHJ36_RS15775 () | 3313983..3314462 | - | 480 | WP_000706978.1 | antirestriction protein | - |
| HHJ36_RS15780 () | 3314728..3315546 | - | 819 | WP_001175155.1 | DUF945 domain-containing protein | - |
| HHJ36_RS15785 () | 3315636..3315869 | - | 234 | WP_001278287.1 | DUF905 family protein | - |
| HHJ36_RS15790 () | 3315875..3316552 | - | 678 | WP_016235129.1 | hypothetical protein | - |
| HHJ36_RS15795 () | 3316703..3317383 | - | 681 | WP_001278649.1 | WYL domain-containing protein | - |
| HHJ36_RS15800 () | 3317586..3318470 | - | 885 | WP_001597162.1 | 50S ribosome-binding GTPase | - |
| HHJ36_RS15805 () | 3318571..3319794 | + | 1224 | WP_001107219.1 | hypothetical protein | - |
| HHJ36_RS15810 () | 3321247..3321978 | + | 732 | WP_001075472.1 | inovirus Gp2 family protein | - |
| HHJ36_RS15815 () | 3322325..3322900 | + | 576 | WP_000991593.1 | hypothetical protein | - |
| HHJ36_RS15820 () | 3322969..3323202 | + | 234 | WP_000958492.1 | AlpA family transcriptional regulator | - |
| HHJ36_RS15825 () | 3323214..3323439 | + | 226 | Protein_3084 | hypothetical protein | - |
| HHJ36_RS15830 () | 3323501..3323767 | - | 267 | Protein_3085 | IS3 family transposase IS2 | Transposase |
| HHJ36_RS15835 () | 3323858..3325015 | + | 1158 | Protein_3086 | hypothetical protein | VF |
| HHJ36_RS15840 () | 3325136..3325786 | + | 651 | Protein_3087 | TetR/AcrR family transcriptional regulator | - |
| HHJ36_RS15845 () | 3325758..3326103 | + | 346 | Protein_3088 | hypothetical protein | VF |
| HHJ36_RS15850 () | 3326460..3327005 | - | 546 | WP_000015571.1 | propanediol utilization system shell hexameric protein GrpS | - |
| HHJ36_RS15855 () | 3327050..3328201 | - | 1152 | WP_001001003.1 | propanediol utilization system methionine adenosyltransferase GrpR | - |
| HHJ36_RS15860 () | 3328330..3329385 | - | 1056 | WP_000494233.1 | hypothetical protein | VF |
| HHJ36_RS15865 () | 3329402..3330631 | - | 1230 | WP_000792585.1 | propanediol utilization sensor histidine kinase GrpP | - |
| HHJ36_RS15870 () | 3331214..3331807 | - | 594 | Protein_3093 | maturase | - |
| HHJ36_RS15875 () | 3331807..3332176 | - | 370 | Protein_3094 | reverse transcriptase/maturase | - |
| HHJ36_RS15880 () | 3332788..3333693 | - | 906 | WP_001086421.1 | propanediol utilization system permease GrpO | - |
| HHJ36_RS15885 () | 3333830..3334747 | - | 918 | WP_001044977.1 | glycyl radical diol dehydratase-activating enzyme GrpN | - |
| HHJ36_RS15890 () | 3334856..3337408 | - | 2553 | WP_000890295.1 | glycyl radical diol dehydratase GrpM | - |
| HHJ36_RS15895 () | 3337457..3338032 | - | 576 | WP_000722279.1 | propanediol utilization system protease GrpL | - |
| HHJ36_RS15900 () | 3338043..3338342 | - | 300 | WP_000746009.1 | propanediol utilization system shell hexameric protein GrpK | - |
| HHJ36_RS15905 () | 3338366..3339883 | - | 1518 | WP_000997839.1 | hypothetical protein | VF |
| HHJ36_RS15910 () | 3339944..3340729 | - | 786 | WP_001205499.1 | propanediol utilization microcompartment protein GrpI | - |
| HHJ36_RS15915 () | 3340751..3341032 | - | 282 | WP_001301171.1 | propanediol utilization system shell hexameric protein GrpH | - |
| HHJ36_RS15920 () | 3341317..3342513 | - | 1197 | WP_001362987.1 | propanediol utilization system propionate kinase GrpG | - |
| HHJ36_RS15925 () | 3342542..3343039 | - | 498 | WP_001332069.1 | propanediol utilization system heme-binding protein GrpF | - |
| HHJ36_RS15930 () | 3343067..3343336 | - | 270 | WP_000280292.1 | propanediol utilization microcompartment vertex protein GrpE | - |
| HHJ36_RS15935 () | 3343348..3344052 | - | 705 | WP_000370216.1 | propanediol utilization system flavoprotein GrpD | - |
| HHJ36_RS15940 () | 3344057..3344815 | - | 759 | WP_001332070.1 | propanediol utilization system chaperone GrpC | - |
| HHJ36_RS15945 () | 3344870..3345556 | - | 687 | WP_001109982.1 | propanediol utilization system phosphotransacylase GrpB | - |
| HHJ36_RS15950 () | 3345696..3346814 | - | 1119 | WP_000135343.1 | hypothetical protein | VF |
| HHJ36_RS15955 () | 3347165..3347664 | + | 500 | Protein_3110 | DNA-binding protein | - |
| HHJ36_RS15960 () | 3347760..3347993 | + | 234 | WP_000124175.1 | hypothetical protein | - |
| HHJ36_RS15965 () | 3348046..3348237 | - | 192 | WP_001287878.1 | DUF4222 domain-containing protein | - |
| HHJ36_RS15970 () | 3348899..3349267 | + | 369 | WP_001350801.1 | ShlB/FhaC/HecB family hemolysin secretion/activation protein | - |
| HHJ36_RS15975 () | 3349237..3349737 | + | 501 | WP_072145580.1 | type VI secretion protein ImpA | - |
| HHJ36_RS15980 () | 3349976..3351393 | + | 1418 | Protein_3115 | hypothetical protein | - |
| HHJ36_RS15990 () | 3351525..3353309 | + | 1785 | WP_000269403.1 | KAP family P-loop domain protein | - |
| HHJ36_RS15995 () | 3353309..3354061 | + | 753 | WP_000537317.1 | hypothetical protein | - |
| HHJ36_RS16000 () | 3354043..3355362 | + | 1320 | WP_170849850.1 | DNA-binding protein | - |
| HHJ36_RS16005 () | 3355359..3356084 | + | 726 | WP_000020778.1 | TatD family hydrolase | - |
| HHJ36_RS16010 () | 3356637..3357212 | - | 576 | WP_000194395.1 | SLATT domain-containing protein | - |
| HHJ36_RS16015 () | 3357220..3358548 | - | 1329 | WP_000019624.1 | nucleotidyltransferase | - |
| HHJ36_RS16020 () | 3358683..3358868 | - | 186 | Protein_3122 | IS66 family transposase IS682 | Transposase |
| HHJ36_RS16025 () | 3358889..3360045 | - | 1157 | Protein_3123 | IS3 family transposase | - |
| HHJ36_RS16030 () | 3360115..3360462 | - | 348 | WP_000477079.1 | alcohol dehydrogenase catalytic domain-containing protein | - |
| HHJ36_RS16035 () | 3361080..3361773 | - | 694 | Protein_3125 | IS1 family transposase IS1N | Transposase |
| HHJ36_RS16040 () | 3362026..3363495 | + | 1470 | WP_001331566.1 | basic amino acid/polyamine antiporter | - |
| HHJ36_RS16045 () | 3363600..3365969 | + | 2370 | WP_000671170.1 | arginine decarboxylase | - |
| HHJ36_RS16050 () | 3366044..3367543 | + | 1500 | WP_001331567.1 | basic amino acid/polyamine antiporter | - |
| HHJ36_RS16055 () | 3367686..3368383 | + | 698 | Protein_3129 | IS1 family transposase IS1S | Transposase |
| HHJ36_RS16060 () | 3368850..3369401 | - | 552 | WP_001447126.1 | hypothetical protein | VF |
| HHJ36_RS16065 () | 3369568..3370359 | - | 792 | Protein_3131 | IS3 family transposase | - |
| HHJ36_RS16070 () | 3370376..3371073 | - | 698 | Protein_3132 | IS1 family transposase IS1S | Transposase |
| HHJ36_RS16075 () | 3371603..3372646 | - | 1044 | WP_000147021.1 | hypothetical protein | - |
| HHJ36_RS16080 () | 3372902..3374167 | - | 1266 | WP_021519580.1 | hypothetical protein ; Integrase | Integrase |
| HHJ36_RS16090 () | 3374547..3375122 | - | 576 | WP_001188520.1 | transcriptional regulator | - |
| HHJ36_RS16095 () | 3375159..3376856 | - | 1698 | WP_000068942.1 | protein-disulfide reductase DsbD | - |
| HHJ36_RS16100 () | 3376832..3377170 | - | 339 | WP_000883409.1 | divalent cation tolerance protein CutA | - |
| HHJ36_RS16105 () | 3377286..3378587 | - | 1302 | WP_000961959.1 | anaerobic C4-dicarboxylate transporter DcuA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|