MGE detailed information
MGE type: Genomic_island MGE length: 21092 bp
Accession: NZ_CP051694 Location: 4390649..4411740 Organism: Escherichia coli strain SCU-313 Replicon: chromosome
Accession: NZ_CP051694 Location: 4390649..4411740 Organism: Escherichia coli strain SCU-313 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HHJ46_RS21090 () | 4386128..4386631 | - | 504 | WP_000870585.1 | type 1 fimbria minor subunit FimG | - |
| HHJ46_RS21095 () | 4386644..4387174 | - | 531 | WP_001244827.1 | type 1 fimbria minor subunit FimF | - |
| HHJ46_RS21100 () | 4387184..4389820 | - | 2637 | WP_000121002.1 | fimbrial usher FimD | - |
| HHJ46_RS21105 () | 4389887..4390612 | - | 726 | WP_000066560.1 | type 1 fimbria chaperone FimC | - |
| HHJ46_RS21110 () | 4390649..4391188 | - | 540 | WP_000824114.1 | hypothetical protein | VF |
| HHJ46_RS21115 () | 4391253..4391801 | - | 549 | WP_169062223.1 | hypothetical protein | VF |
| HHJ46_RS21120 () | 4392283..4392879 | - | 597 | WP_000044711.1 | Tyrosine recombinase XerC | VF |
| HHJ46_RS21125 () | 4393357..4393959 | - | 603 | WP_000790583.1 | Tyrosine recombinase XerC | VF |
| HHJ46_RS21130 () | 4395415..4396131 | + | 717 | WP_001295734.1 | N-acetylneuraminic acid outer membrane channel NanC | - |
| HHJ46_RS21135 () | 4396151..4397257 | + | 1107 | WP_001309184.1 | N-acetylneuraminate epimerase | - |
| HHJ46_RS21140 () | 4397322..4398302 | + | 981 | WP_000991438.1 | 9-O-acetyl-N-acetylneuraminic acid deacetylase | - |
| HHJ46_RS21145 () | 4398917..4399933 | - | 1017 | WP_001322394.1 | IS5 family transposase IS5D | Transposase |
| HHJ46_RS21150 () | 4400084..4401324 | - | 1241 | Protein_4132 | helicase YjhR | - |
| HHJ46_RS21155 () | 4401440..4401685 | + | 246 | Protein_4133 | GNAT family N-acetyltransferase | - |
| HHJ46_RS21160 () | 4402062..4402319 | + | 258 | WP_001054376.1 | hypothetical protein | Toxin Detail |
| HHJ46_RS21165 () | 4402331..4402876 | + | 546 | WP_001309181.1 | N-acetyltransferase | Antitoxin Detail |
| HHJ46_RS21170 () | 4402932..4403678 | + | 747 | WP_000354251.1 | class I SAM-dependent methyltransferase | - |
| HHJ46_RS21175 () | 4403847..4404065 | + | 219 | Protein_4137 | hypothetical protein | - |
| HHJ46_RS25535 () | 4404103..4404219 | + | 117 | Protein_4138 | VOC family protein | - |
| HHJ46_RS21180 () | 4404464..4405585 | + | 1122 | WP_000010829.1 | M42 family metallopeptidase | - |
| HHJ46_RS21185 () | 4405582..4405860 | + | 279 | WP_000722973.1 | PTS sugar transporter subunit IIB | - |
| HHJ46_RS21190 () | 4405872..4407185 | + | 1314 | WP_000460843.1 | galactitol-specific PTS transporter subunit IIC | - |
| HHJ46_RS21195 () | 4407198..4408004 | + | 807 | WP_000118626.1 | BtpA family protein SgcQ | - |
| HHJ46_RS21200 () | 4408135..4408566 | + | 432 | WP_000606406.1 | PTS sugar transporter subunit IIA | - |
| HHJ46_RS21205 () | 4408578..4409210 | + | 633 | WP_000600622.1 | ribulose-phosphate 3 epimerase family protein | - |
| HHJ46_RS21210 () | 4409227..4410009 | + | 783 | WP_000082780.1 | DeoR/GlpR family DNA-binding transcription regulator | - |
| HHJ46_RS21215 () | 4410312..4411082 | + | 771 | WP_169062224.1 | IclR family transcriptional regulator | - |
| HHJ46_RS21220 () | 4411076..4411773 | - | 698 | Protein_4147 | IS1 family transposase IS1R | Transposase |
| HHJ46_RS21225 () | 4411882..4412787 | + | 906 | WP_000714563.1 | dihydrodipicolinate synthase family protein | - |
| HHJ46_RS21230 () | 4412798..4414765 | + | 1968 | WP_000116326.1 | xylonate dehydratase YjhG | - |
| HHJ46_RS21235 () | 4414872..4416221 | + | 1350 | WP_001128363.1 | GntP family permease | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|